RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 AACSQ86V21 672 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 SLC4A2P04920 1241 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 IQGAP2Q13576 1575 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 TOM1O60784 492 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 CFAP100Q494V2 611 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 HECW1Q76N89 1606 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 MYL6BP14649 208 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 TDO2P48775 406 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 MIPOL1Q8TD10 442 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 HS1BP3Q53T59 392 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 MPHOSPH10O00566 681 aaKnown RBP6.48□□□□□ -1.37
CPSF2-201ENST00000298875 TMEM132EQ6IEE7 984 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 JAKMIP1Q96N16 626 aaKnown RBP6.48□□□□□ -1.37
CPSF2-201ENST00000298875 ZSCAN25Q6NSZ9 544 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 CLIP2Q9UDT6 1046 aa6.48□□□□□ -1.37
CPSF2-201ENST00000298875 KIF5CO60282 957 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 ANAPC15P60006 121 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 RNF187Q5TA31 235 aaPredicted RBP6.47□□□□□ -1.37
CPSF2-201ENST00000298875 SPA17Q15506 151 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 GPATCH11Q8N954 259 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 LRPPRCP42704 1394 aaKnown RBP6.47□□□□□ -1.37
CPSF2-201ENST00000298875 PPP1R1BQ9UD71 204 aaPredicted RBP6.47□□□□□ -1.37
CPSF2-201ENST00000298875 STAMBPO95630 424 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 IFFO1Q0D2I5 559 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 BLOC1S2Q6QNY1 142 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 NESP48681 1621 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 NCOA2Q15596 1464 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 DNA2P51530 1060 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 ESPNB1AK53 854 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 TRIM21P19474 475 aaKnown RBP6.47□□□□□ -1.37
CPSF2-201ENST00000298875 PPP2R1AP30153 589 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 UBE4AQ14139 1066 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 GAS2L2Q8NHY3 880 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 CABP4P57796 275 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 ABTB2Q8N961 1025 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 UBXN4Q92575 508 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 BACH2Q9BYV9 841 aa6.47□□□□□ -1.37
CPSF2-201ENST00000298875 CPSF2Q9P2I0 782 aaKnown RBP6.47□□□□□ -1.37
CPSF2-201ENST00000298875 KIF20AO95235 890 aa6.46□□□□□ -1.37
CPSF2-201ENST00000298875 BCCIPQ9P287 314 aaKnown RBP eCLIP6.46□□□□□ -1.37
CPSF2-201ENST00000298875 DENND4BO75064 1496 aaPredicted RBP6.46□□□□□ -1.37
CPSF2-201ENST00000298875 POTEJP0CG39 1038 aa6.46□□□□□ -1.37
CPSF2-201ENST00000298875 PRIMPOLQ96LW4 560 aa6.46□□□□□ -1.37
CPSF2-201ENST00000298875 UBAC1Q9BSL1 405 aa6.46□□□□□ -1.37
CPSF2-201ENST00000298875 PPP1R12BO60237 982 aaPredicted RBP6.46□□□□□ -1.37
CPSF2-201ENST00000298875 NLRP6P59044 892 aa6.46□□□□□ -1.37
CPSF2-201ENST00000298875 WASF1Q92558 559 aa6.46□□□□□ -1.37
CPSF2-201ENST00000298875 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.46□□□□□ -1.38
CPSF2-201ENST00000298875 FANCAO15360 1455 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 PLEKHH1Q9ULM0 1364 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 PTPN14Q15678 1187 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 CEP131Q9UPN4 1083 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 RAI14Q9P0K7 980 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 ERBINQ96RT1 1412 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 CFAP74Q9C0B2 1584 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 PLEKHO1Q53GL0 409 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-201ENST00000298875 CFAP57Q96MR6 1250 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 FKBP15Q5T1M5 1219 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 SRCIN1Q9C0H9 1055 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 BMP2KQ9NSY1 1161 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-201ENST00000298875 USP5P45974 858 aa6.46□□□□□ -1.38
CPSF2-201ENST00000298875 RBM25P49756 843 aaKnown RBP6.46□□□□□ -1.38
CPSF2-201ENST00000298875 GIGYF2Q6Y7W6 1299 aaKnown RBP6.46□□□□□ -1.38
CPSF2-201ENST00000298875 NUP88Q99567 741 aaPredicted RBP6.46□□□□□ -1.38
CPSF2-201ENST00000298875 ZSCAN31Q96LW9 406 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-201ENST00000298875 TSG101Q99816 390 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 GCOM1H8Y6P7 765 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-201ENST00000298875 MYZAPP0CAP1 466 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 ATF7IPQ6VMQ6 1270 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 MVPQ14764 893 aaKnown RBP6.45□□□□□ -1.38
CPSF2-201ENST00000298875 ESCO1Q5FWF5 840 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 DNAI2Q9GZS0 605 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 LIG1P18858 919 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 SFPQP23246 707 aaKnown RBP eCLIP6.45□□□□□ -1.38
CPSF2-201ENST00000298875 CETN2P41208 172 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 CCDC183Q5T5S1 534 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 MPHOSPH8Q99549 860 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 SRGAP3O43295 1099 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 NBPF1Q3BBV0 1214 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 EHBP1L1Q8N3D4 1523 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 DDX54Q8TDD1 881 aaKnown RBP6.45□□□□□ -1.38
CPSF2-201ENST00000298875 HDGFL1Q5TGJ6 251 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 PDE3AQ14432 1141 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 SUDS3Q9H7L9 328 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-201ENST00000298875 CACNA2D4Q7Z3S7 1137 aa6.45□□□□□ -1.38
CPSF2-201ENST00000298875 ZFP91Q96JP5 570 aaPredicted RBP6.45□□□□□ -1.38
CPSF2-201ENST00000298875 FAM184BQ9ULE4 1060 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 TOP1P11387 765 aaKnown RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 KRT32Q14532 448 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 KLHL10Q6JEL2 608 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 ZSCAN29Q8IWY8 852 aaPredicted RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 DDX12PQ92771 950 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 SEC63Q9UGP8 760 aaKnown RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 TUBBP07437 444 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 IMMTQ16891 758 aaKnown RBP6.44□□□□□ -1.38
CPSF2-201ENST00000298875 UBA5Q9GZZ9 404 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 STRN4Q9NRL3 753 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 BTBD11A6QL63 1104 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 MCM4P33991 863 aa6.44□□□□□ -1.38
CPSF2-201ENST00000298875 CCDC83Q8IWF9 413 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms