RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 REC8O95072 547 aa17.98■□□□□ 0.47
SPIDR-201ENST00000297423 PRKAR2BP31323 418 aa17.97■□□□□ 0.47
SPIDR-201ENST00000297423 MCCP23508 829 aa17.97■□□□□ 0.47
SPIDR-201ENST00000297423 PDE4CQ08493 712 aa17.97■□□□□ 0.47
SPIDR-201ENST00000297423 PTPRUQ92729 1446 aa17.96■□□□□ 0.47
SPIDR-201ENST00000297423 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
SPIDR-201ENST00000297423 TTC21BQ7Z4L5 1316 aa17.96■□□□□ 0.47
SPIDR-201ENST00000297423 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.47
SPIDR-201ENST00000297423 PROSER2Q86WR7 435 aaPredicted RBP17.96■□□□□ 0.46
SPIDR-201ENST00000297423 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
SPIDR-201ENST00000297423 AK9Q5TCS8 1911 aa17.95■□□□□ 0.46
SPIDR-201ENST00000297423 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
SPIDR-201ENST00000297423 TSPYL6Q8N831 410 aa17.95■□□□□ 0.46
SPIDR-201ENST00000297423 POLKQ9UBT6 870 aa17.95■□□□□ 0.46
SPIDR-201ENST00000297423 GADD45BO75293 160 aaPredicted RBP17.94■□□□□ 0.46
SPIDR-201ENST00000297423 HS1BP3Q53T59 392 aa17.94■□□□□ 0.46
SPIDR-201ENST00000297423 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.94■□□□□ 0.46
SPIDR-201ENST00000297423 PIK3R4Q99570 1358 aa17.94■□□□□ 0.46
SPIDR-201ENST00000297423 CPS1P31327 1500 aa17.94■□□□□ 0.46
SPIDR-201ENST00000297423 GOLGA6L4A6NEF3 574 aa17.94■□□□□ 0.46
SPIDR-201ENST00000297423 DCTN1Q14203 1278 aa17.94■□□□□ 0.46
SPIDR-201ENST00000297423 LMOD2Q6P5Q4 547 aa17.93■□□□□ 0.46
SPIDR-201ENST00000297423 ATP2B3Q16720 1220 aa17.93■□□□□ 0.46
SPIDR-201ENST00000297423 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
SPIDR-201ENST00000297423 NLRP6P59044 892 aa17.93■□□□□ 0.46
SPIDR-201ENST00000297423 C16orf45Q96MC5 204 aaPredicted RBP17.93■□□□□ 0.46
SPIDR-201ENST00000297423 ZBTB22O15209 634 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 ESCO1Q5FWF5 840 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 MYRIPQ8NFW9 859 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 CD163L1Q9NR16 1453 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 SDSP20132 328 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 TERF1P54274 439 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 MAP4K4O95819 1239 aaPredicted RBP17.92■□□□□ 0.46
SPIDR-201ENST00000297423 DMTNQ08495 405 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 GIMAP6Q6P9H5 292 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 TMX3Q96JJ7 454 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 DIAPH3Q9NSV4 1193 aa17.92■□□□□ 0.46
SPIDR-201ENST00000297423 SETD1BQ9UPS6 1966 aaKnown RBP17.92■□□□□ 0.46
SPIDR-201ENST00000297423 VPS37CA5D8V6 355 aaPredicted RBP17.91■□□□□ 0.46
SPIDR-201ENST00000297423 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
SPIDR-201ENST00000297423 AMPHP49418 695 aa17.91■□□□□ 0.46
SPIDR-201ENST00000297423 FGD1P98174 961 aa17.91■□□□□ 0.46
SPIDR-201ENST00000297423 NUTM2GQ5VZR2 741 aa17.91■□□□□ 0.46
SPIDR-201ENST00000297423 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
SPIDR-201ENST00000297423 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
SPIDR-201ENST00000297423 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.91■□□□□ 0.46
SPIDR-201ENST00000297423 V9GYY5 206 aaPredicted RBP17.91■□□□□ 0.46
SPIDR-201ENST00000297423 MCM5P33992 734 aa17.91■□□□□ 0.46
SPIDR-201ENST00000297423 PSME1Q06323 249 aa17.91■□□□□ 0.46
SPIDR-201ENST00000297423 BCL2L12Q9HB09 334 aa17.91■□□□□ 0.46
SPIDR-201ENST00000297423 TWISTNBQ3B726 338 aaPredicted RBP17.91■□□□□ 0.46
SPIDR-201ENST00000297423 USP32Q8NFA0 1604 aa17.91■□□□□ 0.46
SPIDR-201ENST00000297423 DDIT3P35638 169 aa17.9■□□□□ 0.46
SPIDR-201ENST00000297423 NPHP4O75161 1426 aaPredicted RBP17.9■□□□□ 0.46
SPIDR-201ENST00000297423 CPSF1Q10570 1443 aaKnown RBP17.9■□□□□ 0.46
SPIDR-201ENST00000297423 PTCH1Q13635 1447 aa17.9■□□□□ 0.46
SPIDR-201ENST00000297423 SETD1AO15047 1707 aaKnown RBP17.9■□□□□ 0.46
SPIDR-201ENST00000297423 USP26Q9BXU7 913 aa17.9■□□□□ 0.46
SPIDR-201ENST00000297423 MED14O60244 1454 aa17.9■□□□□ 0.46
SPIDR-201ENST00000297423 CAMK4Q16566 473 aa17.89■□□□□ 0.46
SPIDR-201ENST00000297423 ABTB2Q8N961 1025 aa17.89■□□□□ 0.46
SPIDR-201ENST00000297423 PHF8Q9UPP1 1060 aa17.89■□□□□ 0.46
SPIDR-201ENST00000297423 ERC2O15083 957 aa17.89■□□□□ 0.45
SPIDR-201ENST00000297423 USP48Q86UV5 1035 aa17.89■□□□□ 0.45
SPIDR-201ENST00000297423 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
SPIDR-201ENST00000297423 FCHSD2O94868 740 aa17.89■□□□□ 0.45
SPIDR-201ENST00000297423 KCNJ4P48050 445 aa17.88■□□□□ 0.45
SPIDR-201ENST00000297423 EXOC6BQ9Y2D4 811 aa17.88■□□□□ 0.45
SPIDR-201ENST00000297423 RIOK3O14730 519 aaKnown RBP17.88■□□□□ 0.45
SPIDR-201ENST00000297423 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
SPIDR-201ENST00000297423 TRIM35Q9UPQ4 493 aa17.88■□□□□ 0.45
SPIDR-201ENST00000297423 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
SPIDR-201ENST00000297423 GOLGA6L6A8MZA4 724 aa17.88■□□□□ 0.45
SPIDR-201ENST00000297423 DIP2AQ14689 1571 aa17.87■□□□□ 0.45
SPIDR-201ENST00000297423 ZBTB7BO15156 539 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-201ENST00000297423 TTC22Q5TAA0 569 aa17.87■□□□□ 0.45
SPIDR-201ENST00000297423 ZSCAN20P17040 1043 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-201ENST00000297423 CNPY2Q9Y2B0 182 aa17.87■□□□□ 0.45
SPIDR-201ENST00000297423 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
SPIDR-201ENST00000297423 CT47B1P0C2W7 299 aaPredicted RBP17.86■□□□□ 0.45
SPIDR-201ENST00000297423 HSPA2P54652 639 aa17.86■□□□□ 0.45
SPIDR-201ENST00000297423 PRIMPOLQ96LW4 560 aa17.86■□□□□ 0.45
SPIDR-201ENST00000297423 FAM83GA6ND36 823 aa17.85■□□□□ 0.45
SPIDR-201ENST00000297423 ZBTB9Q96C00 473 aa17.85■□□□□ 0.45
SPIDR-201ENST00000297423 PDLIM2Q96JY6 352 aa17.85■□□□□ 0.45
SPIDR-201ENST00000297423 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
SPIDR-201ENST00000297423 TPD52L1Q16890 204 aaPredicted RBP17.85■□□□□ 0.45
SPIDR-201ENST00000297423 API5Q9BZZ5 524 aaKnown RBP17.85■□□□□ 0.45
SPIDR-201ENST00000297423 TRIM5Q9C035 493 aa17.85■□□□□ 0.45
SPIDR-201ENST00000297423 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
SPIDR-201ENST00000297423 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
SPIDR-201ENST00000297423 ATF3P18847 181 aa17.84■□□□□ 0.45
SPIDR-201ENST00000297423 ZDHHC9Q9Y397 364 aa17.84■□□□□ 0.45
SPIDR-201ENST00000297423 USP6P35125 1406 aa17.84■□□□□ 0.45
SPIDR-201ENST00000297423 KRT24Q2M2I5 525 aa17.84■□□□□ 0.45
SPIDR-201ENST00000297423 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.45
SPIDR-201ENST00000297423 PIBF1Q8WXW3 757 aa17.83■□□□□ 0.44
SPIDR-201ENST00000297423 SIRT2Q8IXJ6 389 aa17.83■□□□□ 0.44
SPIDR-201ENST00000297423 CKAP2LQ8IYA6 745 aa17.82■□□□□ 0.44
SPIDR-201ENST00000297423 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms