RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 USP26Q9BXU7 913 aa12.33□□□□□ -0.43
TNFRSF11B-201ENST00000297350 TRPM3Q9HCF6 1732 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF11B-201ENST00000297350 LMO7Q8WWI1 1683 aa12.33□□□□□ -0.44
TNFRSF11B-201ENST00000297350 NFAT5O94916 1531 aa12.33□□□□□ -0.44
TNFRSF11B-201ENST00000297350 SRCIN1Q9C0H9 1055 aa12.33□□□□□ -0.44
TNFRSF11B-201ENST00000297350 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
TNFRSF11B-201ENST00000297350 MRE11P49959 708 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 STRCP1A6NGW2 1772 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 DCCP43146 1447 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 KDM3BQ7LBC6 1761 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 NUTM2FA1L443 756 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 ST18O60284 1047 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 NUCB2P80303 420 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 TNPO1Q92973 898 aaKnown RBP12.32□□□□□ -0.44
TNFRSF11B-201ENST00000297350 ERC2O15083 957 aa12.31□□□□□ -0.44
TNFRSF11B-201ENST00000297350 SDSP20132 328 aa12.31□□□□□ -0.44
TNFRSF11B-201ENST00000297350 FLIIQ13045 1269 aa12.31□□□□□ -0.44
TNFRSF11B-201ENST00000297350 CEMIPQ8WUJ3 1361 aa12.31□□□□□ -0.44
TNFRSF11B-201ENST00000297350 IBTKQ9P2D0 1353 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF11B-201ENST00000297350 MST1RQ04912 1400 aa12.31□□□□□ -0.44
TNFRSF11B-201ENST00000297350 FOXO3O43524 673 aa12.3□□□□□ -0.44
TNFRSF11B-201ENST00000297350 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
TNFRSF11B-201ENST00000297350 MCM2P49736 904 aa12.3□□□□□ -0.44
TNFRSF11B-201ENST00000297350 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
TNFRSF11B-201ENST00000297350 LRRCC1Q9C099 1032 aa12.3□□□□□ -0.44
TNFRSF11B-201ENST00000297350 SLIT3O75094 1523 aa12.3□□□□□ -0.44
TNFRSF11B-201ENST00000297350 SALL3Q9BXA9 1300 aa12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 PDE1AP54750 535 aa12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 IP6K1Q92551 441 aa12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 STAP2Q9UGK3 403 aa12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 SOX12O15370 315 aa12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 FKBP5Q13451 457 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 ABTB2Q8N961 1025 aa12.29□□□□□ -0.44
TNFRSF11B-201ENST00000297350 CAMTA1Q9Y6Y1 1673 aa12.28□□□□□ -0.44
TNFRSF11B-201ENST00000297350 MCCP23508 829 aa12.28□□□□□ -0.44
TNFRSF11B-201ENST00000297350 ANAPC15P60006 121 aa12.28□□□□□ -0.44
TNFRSF11B-201ENST00000297350 SLC4A10Q6U841 1118 aa12.28□□□□□ -0.44
TNFRSF11B-201ENST00000297350 G2E3Q7L622 706 aa12.28□□□□□ -0.44
TNFRSF11B-201ENST00000297350 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
TNFRSF11B-201ENST00000297350 ALS2Q96Q42 1657 aa12.27□□□□□ -0.44
TNFRSF11B-201ENST00000297350 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.44
TNFRSF11B-201ENST00000297350 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.44
TNFRSF11B-201ENST00000297350 IL17REQ8NFR9 667 aa12.27□□□□□ -0.45
TNFRSF11B-201ENST00000297350 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
TNFRSF11B-201ENST00000297350 STRCQ7RTU9 1775 aa12.26□□□□□ -0.45
TNFRSF11B-201ENST00000297350 CD2BP2O95400 341 aaKnown RBP12.26□□□□□ -0.45
TNFRSF11B-201ENST00000297350 MX1P20591 662 aa12.26□□□□□ -0.45
TNFRSF11B-201ENST00000297350 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
TNFRSF11B-201ENST00000297350 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
TNFRSF11B-201ENST00000297350 F6X3S4 739 aa12.26□□□□□ -0.45
TNFRSF11B-201ENST00000297350 OTUD7AQ8TE49 926 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF11B-201ENST00000297350 SMARCA5O60264 1052 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 UBTFL1P0CB47 393 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 XRCC6P12956 609 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 AMOTQ4VCS5 1084 aa12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 HSP90AB4PQ58FF6 505 aa12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 SSH3Q8TE77 659 aa12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 C1orf167Q5SNV9 1468 aa12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 CYP2E1P05181 493 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 KLHL40Q2TBA0 621 aa12.25□□□□□ -0.45
TNFRSF11B-201ENST00000297350 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
TNFRSF11B-201ENST00000297350 ABCC6O95255 1503 aa12.24□□□□□ -0.45
TNFRSF11B-201ENST00000297350 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
TNFRSF11B-201ENST00000297350 ESYT1Q9BSJ8 1104 aa12.23□□□□□ -0.45
TNFRSF11B-201ENST00000297350 GRPEL1Q9HAV7 217 aa12.23□□□□□ -0.45
TNFRSF11B-201ENST00000297350 ADAMTS7Q9UKP4 1686 aa12.23□□□□□ -0.45
TNFRSF11B-201ENST00000297350 AK9Q5TCS8 1911 aa12.23□□□□□ -0.45
TNFRSF11B-201ENST00000297350 CRYBG1Q9Y4K1 1723 aa12.23□□□□□ -0.45
TNFRSF11B-201ENST00000297350 POLA2Q14181 598 aa12.23□□□□□ -0.45
TNFRSF11B-201ENST00000297350 BAG4O95429 457 aaKnown RBP12.22□□□□□ -0.45
TNFRSF11B-201ENST00000297350 PLEKHO1Q53GL0 409 aaPredicted RBP12.22□□□□□ -0.45
TNFRSF11B-201ENST00000297350 USP44Q9H0E7 712 aa12.22□□□□□ -0.45
TNFRSF11B-201ENST00000297350 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
TNFRSF11B-201ENST00000297350 SIPA1L3O60292 1781 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF11B-201ENST00000297350 SSFA2P28290 1259 aa12.21□□□□□ -0.45
TNFRSF11B-201ENST00000297350 INTS4Q96HW7 963 aaKnown RBP12.21□□□□□ -0.45
TNFRSF11B-201ENST00000297350 GZF1Q9H116 711 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF11B-201ENST00000297350 EXOC6BQ9Y2D4 811 aa12.21□□□□□ -0.45
TNFRSF11B-201ENST00000297350 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.45
TNFRSF11B-201ENST00000297350 APBB1O00213 710 aa12.21□□□□□ -0.46
TNFRSF11B-201ENST00000297350 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 CHMLP26374 656 aa12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 KIF1BPQ96EK5 621 aa12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 USP42Q9H9J4 1324 aaKnown RBP12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 ALDH1L1O75891 902 aa12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 PSME1Q06323 249 aa12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 MTX1Q13505 466 aa12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 C19orf44Q9H6X5 657 aa12.2□□□□□ -0.46
TNFRSF11B-201ENST00000297350 TEFQ10587 303 aa12.19□□□□□ -0.46
TNFRSF11B-201ENST00000297350 CUL4AQ13619 759 aa12.19□□□□□ -0.46
TNFRSF11B-201ENST00000297350 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
TNFRSF11B-201ENST00000297350 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
TNFRSF11B-201ENST00000297350 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms