RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 EXOC6BQ9Y2D4 811 aa12.4□□□□□ -0.42
CCDC36-201ENST00000296449 AKAP12Q02952 1782 aa12.4□□□□□ -0.43
CCDC36-201ENST00000296449 CCT4P50991 539 aaKnown RBP12.4□□□□□ -0.43
CCDC36-201ENST00000296449 INTS4Q96HW7 963 aaKnown RBP12.4□□□□□ -0.43
CCDC36-201ENST00000296449 MIS18AQ9NYP9 233 aa12.4□□□□□ -0.43
CCDC36-201ENST00000296449 METP08581 1390 aa12.39□□□□□ -0.43
CCDC36-201ENST00000296449 UQCRHLA0A096LP55 91 aa12.39□□□□□ -0.43
CCDC36-201ENST00000296449 UQCRHP07919 91 aa12.39□□□□□ -0.43
CCDC36-201ENST00000296449 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
CCDC36-201ENST00000296449 MCCP23508 829 aa12.39□□□□□ -0.43
CCDC36-201ENST00000296449 ANAPC15P60006 121 aa12.39□□□□□ -0.43
CCDC36-201ENST00000296449 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
CCDC36-201ENST00000296449 IL17RAQ96F46 866 aa12.39□□□□□ -0.43
CCDC36-201ENST00000296449 GNAI2P04899 355 aa12.38□□□□□ -0.43
CCDC36-201ENST00000296449 CHMLP26374 656 aa12.38□□□□□ -0.43
CCDC36-201ENST00000296449 NOL8Q76FK4 1167 aaKnown RBP12.38□□□□□ -0.43
CCDC36-201ENST00000296449 TSPY26PQ9H489 355 aa12.38□□□□□ -0.43
CCDC36-201ENST00000296449 NRXN3Q9Y4C0 1643 aa12.38□□□□□ -0.43
CCDC36-201ENST00000296449 PRR36Q9H6K5 1346 aa12.38□□□□□ -0.43
CCDC36-201ENST00000296449 TRHP20396 242 aaPredicted RBP12.38□□□□□ -0.43
CCDC36-201ENST00000296449 MX1P20591 662 aa12.38□□□□□ -0.43
CCDC36-201ENST00000296449 ANO2Q9NQ90 1003 aa12.38□□□□□ -0.43
CCDC36-201ENST00000296449 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
CCDC36-201ENST00000296449 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
CCDC36-201ENST00000296449 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
CCDC36-201ENST00000296449 HSP90AB2PQ58FF8 381 aa12.37□□□□□ -0.43
CCDC36-201ENST00000296449 MTERF4Q7Z6M4 381 aaKnown RBP12.36□□□□□ -0.43
CCDC36-201ENST00000296449 SYAP1Q96A49 352 aaPredicted RBP12.36□□□□□ -0.43
CCDC36-201ENST00000296449 PNMA6EA0A0J9YXQ4 647 aa12.36□□□□□ -0.43
CCDC36-201ENST00000296449 DYNC1I1O14576 645 aa12.36□□□□□ -0.43
CCDC36-201ENST00000296449 FOXO3O43524 673 aa12.36□□□□□ -0.43
CCDC36-201ENST00000296449 GADD45BO75293 160 aaPredicted RBP12.36□□□□□ -0.43
CCDC36-201ENST00000296449 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
CCDC36-201ENST00000296449 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
CCDC36-201ENST00000296449 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
CCDC36-201ENST00000296449 RGPD1P0DJD0 1748 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 TTC21BQ7Z4L5 1316 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 TRIM6-TRIM34B2RNG4 842 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 SASS6Q6UVJ0 657 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 GDPD2Q9HCC8 539 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
CCDC36-201ENST00000296449 FOXD4L6Q3SYB3 417 aaPredicted RBP12.35□□□□□ -0.43
CCDC36-201ENST00000296449 FOXD4L3Q6VB84 417 aaPredicted RBP12.35□□□□□ -0.43
CCDC36-201ENST00000296449 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 STAP2Q9UGK3 403 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 SPATA31D1Q6ZQQ2 1576 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
CCDC36-201ENST00000296449 PTMAP06454 111 aaKnown RBP12.34□□□□□ -0.43
CCDC36-201ENST00000296449 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC36-201ENST00000296449 ARHGEF10O15013 1369 aa12.34□□□□□ -0.43
CCDC36-201ENST00000296449 TECPR2O15040 1411 aa12.34□□□□□ -0.43
CCDC36-201ENST00000296449 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
CCDC36-201ENST00000296449 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
CCDC36-201ENST00000296449 SIRT1Q96EB6 747 aa12.34□□□□□ -0.43
CCDC36-201ENST00000296449 MAP3K19Q56UN5 1328 aa12.33□□□□□ -0.43
CCDC36-201ENST00000296449 WDR33Q9C0J8 1336 aaKnown RBP12.33□□□□□ -0.43
CCDC36-201ENST00000296449 PHF14O94880 888 aa12.33□□□□□ -0.44
CCDC36-201ENST00000296449 GNAI3P08754 354 aa12.33□□□□□ -0.44
CCDC36-201ENST00000296449 KIAA2012Q0VF49 1180 aa12.33□□□□□ -0.44
CCDC36-201ENST00000296449 MTHFSDQ2M296 383 aaKnown RBP12.33□□□□□ -0.44
CCDC36-201ENST00000296449 IL25Q9H293 177 aa12.33□□□□□ -0.44
CCDC36-201ENST00000296449 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
CCDC36-201ENST00000296449 SRCIN1Q9C0H9 1055 aa12.33□□□□□ -0.44
CCDC36-201ENST00000296449 FLIIQ13045 1269 aa12.32□□□□□ -0.44
CCDC36-201ENST00000296449 UVSSAQ2YD98 709 aa12.32□□□□□ -0.44
CCDC36-201ENST00000296449 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
CCDC36-201ENST00000296449 STK31Q9BXU1 1019 aa12.32□□□□□ -0.44
CCDC36-201ENST00000296449 PPP6R1Q9UPN7 881 aa12.32□□□□□ -0.44
CCDC36-201ENST00000296449 ACEP12821 1306 aa12.32□□□□□ -0.44
CCDC36-201ENST00000296449 HSPA4P34932 840 aa12.31□□□□□ -0.44
CCDC36-201ENST00000296449 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
CCDC36-201ENST00000296449 TMEM87AQ8NBN3 555 aa12.31□□□□□ -0.44
CCDC36-201ENST00000296449 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
CCDC36-201ENST00000296449 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
CCDC36-201ENST00000296449 LRRFIP2Q9Y608 721 aaKnown RBP12.31□□□□□ -0.44
CCDC36-201ENST00000296449 AOX1Q06278 1338 aa12.31□□□□□ -0.44
CCDC36-201ENST00000296449 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
CCDC36-201ENST00000296449 SOX12O15370 315 aa12.3□□□□□ -0.44
CCDC36-201ENST00000296449 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
CCDC36-201ENST00000296449 RIMS1Q86UR5 1692 aaKnown RBP12.3□□□□□ -0.44
CCDC36-201ENST00000296449 USP25Q9UHP3 1055 aa12.3□□□□□ -0.44
CCDC36-201ENST00000296449 AGLP35573 1532 aa12.3□□□□□ -0.44
CCDC36-201ENST00000296449 XRN1Q8IZH2 1706 aaKnown RBP12.3□□□□□ -0.44
CCDC36-201ENST00000296449 CCDC183Q5T5S1 534 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 MPNDQ8N594 471 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 TCHHQ07283 1943 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 ROBO2Q9HCK4 1378 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 USP6P35125 1406 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 ZNF830Q96NB3 372 aaPredicted RBP12.29□□□□□ -0.44
CCDC36-201ENST00000296449 IL1RAPL2Q9NP60 686 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 CNPY2Q9Y2B0 182 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 KDRP35968 1356 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
CCDC36-201ENST00000296449 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
CCDC36-201ENST00000296449 PIBF1Q8WXW3 757 aa12.28□□□□□ -0.44
CCDC36-201ENST00000296449 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
CCDC36-201ENST00000296449 USP44Q9H0E7 712 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms