RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 LTN1O94822 1766 aa18.9■□□□□ 0.62
LRRTM1-201ENST00000295057 CCDC173Q0VFZ6 552 aa18.89■□□□□ 0.62
LRRTM1-201ENST00000295057 CABLES1Q8TDN4 633 aa18.89■□□□□ 0.62
LRRTM1-201ENST00000295057 MST1RQ04912 1400 aa18.89■□□□□ 0.61
LRRTM1-201ENST00000295057 ARHGEF25Q86VW2 580 aa18.89■□□□□ 0.61
LRRTM1-201ENST00000295057 GAS2L2Q8NHY3 880 aa18.89■□□□□ 0.61
LRRTM1-201ENST00000295057 PRDM4Q9UKN5 801 aa18.89■□□□□ 0.61
LRRTM1-201ENST00000295057 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
LRRTM1-201ENST00000295057 PPP1R9BQ96SB3 815 aa18.88■□□□□ 0.61
LRRTM1-201ENST00000295057 KIF24Q5T7B8 1368 aa18.88■□□□□ 0.61
LRRTM1-201ENST00000295057 USP54Q70EL1 1684 aa18.88■□□□□ 0.61
LRRTM1-201ENST00000295057 ZSCAN30Q86W11 494 aa18.88■□□□□ 0.61
LRRTM1-201ENST00000295057 IL17REQ8NFR9 667 aa18.88■□□□□ 0.61
LRRTM1-201ENST00000295057 TSPYL4Q9UJ04 414 aa18.88■□□□□ 0.61
LRRTM1-201ENST00000295057 NUCB1Q02818 461 aa18.87■□□□□ 0.61
LRRTM1-201ENST00000295057 GNAT3A8MTJ3 354 aa18.87■□□□□ 0.61
LRRTM1-201ENST00000295057 C1orf115Q9H7X2 142 aa18.87■□□□□ 0.61
LRRTM1-201ENST00000295057 ZBTB40Q9NUA8 1239 aa18.87■□□□□ 0.61
LRRTM1-201ENST00000295057 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
LRRTM1-201ENST00000295057 ZNF428Q96B54 188 aa18.86■□□□□ 0.61
LRRTM1-201ENST00000295057 ZNF335Q9H4Z2 1342 aaPredicted RBP18.86■□□□□ 0.61
LRRTM1-201ENST00000295057 MSH6P52701 1360 aa18.85■□□□□ 0.61
LRRTM1-201ENST00000295057 OFD1O75665 1012 aa18.85■□□□□ 0.61
LRRTM1-201ENST00000295057 BRPF1P55201 1214 aaPredicted RBP18.85■□□□□ 0.61
LRRTM1-201ENST00000295057 K7ELQ4 463 aaPredicted RBP18.85■□□□□ 0.61
LRRTM1-201ENST00000295057 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
LRRTM1-201ENST00000295057 AK9Q5TCS8 1911 aa18.84■□□□□ 0.61
LRRTM1-201ENST00000295057 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
LRRTM1-201ENST00000295057 ANKRD24Q8TF21 1146 aa18.84■□□□□ 0.61
LRRTM1-201ENST00000295057 NECTIN2Q92692 538 aa18.84■□□□□ 0.61
LRRTM1-201ENST00000295057 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.6
LRRTM1-201ENST00000295057 LGR6Q9HBX8 967 aa18.83■□□□□ 0.6
LRRTM1-201ENST00000295057 TRPM3Q9HCF6 1732 aaPredicted RBP18.83■□□□□ 0.6
LRRTM1-201ENST00000295057 MSNP26038 577 aaKnown RBP18.83■□□□□ 0.6
LRRTM1-201ENST00000295057 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
LRRTM1-201ENST00000295057 BAG4O95429 457 aaKnown RBP18.82■□□□□ 0.6
LRRTM1-201ENST00000295057 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
LRRTM1-201ENST00000295057 ZBTB7BO15156 539 aaPredicted RBP18.81■□□□□ 0.6
LRRTM1-201ENST00000295057 SLC4A2P04920 1241 aa18.81■□□□□ 0.6
LRRTM1-201ENST00000295057 PTMSP20962 102 aa18.81■□□□□ 0.6
LRRTM1-201ENST00000295057 CHRNA2Q15822 529 aa18.81■□□□□ 0.6
LRRTM1-201ENST00000295057 KLHL40Q2TBA0 621 aa18.81■□□□□ 0.6
LRRTM1-201ENST00000295057 BMP2KLQ5H9B9 411 aa18.81■□□□□ 0.6
LRRTM1-201ENST00000295057 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
LRRTM1-201ENST00000295057 SLIT3O75094 1523 aa18.8■□□□□ 0.6
LRRTM1-201ENST00000295057 A0A0U1RQG5 324 aaPredicted RBP18.8■□□□□ 0.6
LRRTM1-201ENST00000295057 TBC1D9Q6ZT07 1266 aa18.8■□□□□ 0.6
LRRTM1-201ENST00000295057 G2E3Q7L622 706 aa18.8■□□□□ 0.6
LRRTM1-201ENST00000295057 ARHGAP45Q92619 1136 aa18.8■□□□□ 0.6
LRRTM1-201ENST00000295057 R3HCC1Q9Y3T6 440 aaKnown RBP18.8■□□□□ 0.6
LRRTM1-201ENST00000295057 ABCC4O15439 1325 aa18.8■□□□□ 0.6
LRRTM1-201ENST00000295057 ANKRD45Q5TZF3 282 aa18.8■□□□□ 0.6
LRRTM1-201ENST00000295057 DCCP43146 1447 aa18.79■□□□□ 0.6
LRRTM1-201ENST00000295057 MED1Q15648 1581 aaPredicted RBP18.79■□□□□ 0.6
LRRTM1-201ENST00000295057 FAM13BQ9NYF5 915 aa18.79■□□□□ 0.6
LRRTM1-201ENST00000295057 GOLGA6L22H0YM25 854 aa18.79■□□□□ 0.6
LRRTM1-201ENST00000295057 MPRIPQ6WCQ1 1025 aa18.79■□□□□ 0.6
LRRTM1-201ENST00000295057 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.79■□□□□ 0.6
LRRTM1-201ENST00000295057 KIAA0232Q92628 1395 aa18.78■□□□□ 0.6
LRRTM1-201ENST00000295057 NCLP19338 710 aaKnown RBP18.78■□□□□ 0.6
LRRTM1-201ENST00000295057 BRINP3Q76B58 766 aa18.78■□□□□ 0.6
LRRTM1-201ENST00000295057 MCTP1Q6DN14 999 aa18.78■□□□□ 0.6
LRRTM1-201ENST00000295057 CAVIN1Q6NZI2 390 aaKnown RBP18.78■□□□□ 0.6
LRRTM1-201ENST00000295057 ZNF530Q6P9A1 599 aaPredicted RBP18.78■□□□□ 0.6
LRRTM1-201ENST00000295057 HTATSF1O43719 755 aaKnown RBP18.77■□□□□ 0.6
LRRTM1-201ENST00000295057 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.77■□□□□ 0.59
LRRTM1-201ENST00000295057 KIF1AQ12756 1690 aa18.77■□□□□ 0.59
LRRTM1-201ENST00000295057 NPHP3Q7Z494 1330 aa18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 KCNQ3O43525 872 aa18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 TAF7Q15545 349 aaPredicted RBP18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 API5Q9BZZ5 524 aaKnown RBP18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 RBSNQ9H1K0 784 aa18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 IBTKQ9P2D0 1353 aaPredicted RBP18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 F6X3S4 739 aa18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 CLEC17AQ6ZS10 378 aa18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 MAP7D2Q96T17 732 aa18.76■□□□□ 0.59
LRRTM1-201ENST00000295057 PKP1Q13835 747 aa18.75■□□□□ 0.59
LRRTM1-201ENST00000295057 ZSCAN23Q3MJ62 389 aa18.75■□□□□ 0.59
LRRTM1-201ENST00000295057 ARID3AQ99856 593 aa18.75■□□□□ 0.59
LRRTM1-201ENST00000295057 NLRP2Q9NX02 1062 aa18.75■□□□□ 0.59
LRRTM1-201ENST00000295057 RGS12O14924 1447 aa18.74■□□□□ 0.59
LRRTM1-201ENST00000295057 PXDNQ92626 1479 aa18.74■□□□□ 0.59
LRRTM1-201ENST00000295057 ERBB3P21860 1342 aa18.74■□□□□ 0.59
LRRTM1-201ENST00000295057 ZNF445P59923 1031 aa18.74■□□□□ 0.59
LRRTM1-201ENST00000295057 SIRT2Q8IXJ6 389 aa18.74■□□□□ 0.59
LRRTM1-201ENST00000295057 ALS2Q96Q42 1657 aa18.74■□□□□ 0.59
LRRTM1-201ENST00000295057 XIRP1Q702N8 1843 aaKnown RBP18.73■□□□□ 0.59
LRRTM1-201ENST00000295057 TERF1P54274 439 aa18.73■□□□□ 0.59
LRRTM1-201ENST00000295057 PLEKHO1Q53GL0 409 aaPredicted RBP18.73■□□□□ 0.59
LRRTM1-201ENST00000295057 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
LRRTM1-201ENST00000295057 RGPD5Q99666 1765 aa18.72■□□□□ 0.59
LRRTM1-201ENST00000295057 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
LRRTM1-201ENST00000295057 SLC4A10Q6U841 1118 aa18.72■□□□□ 0.59
LRRTM1-201ENST00000295057 LMBRD1Q9NUN5 540 aa18.72■□□□□ 0.59
LRRTM1-201ENST00000295057 NOL7Q9UMY1 257 aaKnown RBP18.72■□□□□ 0.59
LRRTM1-201ENST00000295057 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
LRRTM1-201ENST00000295057 RBM27Q9P2N5 1060 aaKnown RBP18.71■□□□□ 0.59
LRRTM1-201ENST00000295057 TNS3Q68CZ2 1445 aa18.71■□□□□ 0.59
LRRTM1-201ENST00000295057 UQCRHLA0A096LP55 91 aa18.71■□□□□ 0.59
LRRTM1-201ENST00000295057 UQCRHP07919 91 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms