RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 BRD1O95696 1058 aa17.79■□□□□ 0.44
CCNF-201ENST00000293968 TSC1Q92574 1164 aa17.79■□□□□ 0.44
CCNF-201ENST00000293968 ATP10DQ9P241 1426 aa17.79■□□□□ 0.44
CCNF-201ENST00000293968 PNMA6EA0A0J9YXQ4 647 aa17.79■□□□□ 0.44
CCNF-201ENST00000293968 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
CCNF-201ENST00000293968 SASS6Q6UVJ0 657 aa17.79■□□□□ 0.44
CCNF-201ENST00000293968 LRRFIP2Q9Y608 721 aaKnown RBP17.79■□□□□ 0.44
CCNF-201ENST00000293968 LTV1Q96GA3 475 aaPredicted RBP17.78■□□□□ 0.44
CCNF-201ENST00000293968 CHMLP26374 656 aa17.78■□□□□ 0.44
CCNF-201ENST00000293968 FAM177BA6PVY3 158 aa17.78■□□□□ 0.44
CCNF-201ENST00000293968 PLEKHG5O94827 1062 aa17.78■□□□□ 0.44
CCNF-201ENST00000293968 TTC12Q9H892 705 aaPredicted RBP17.78■□□□□ 0.44
CCNF-201ENST00000293968 UNC5CLQ8IV45 518 aa17.77■□□□□ 0.44
CCNF-201ENST00000293968 CNPY2Q9Y2B0 182 aa17.77■□□□□ 0.44
CCNF-201ENST00000293968 JARID2Q92833 1246 aaPredicted RBP17.77■□□□□ 0.44
CCNF-201ENST00000293968 HECW2Q9P2P5 1572 aa17.77■□□□□ 0.44
CCNF-201ENST00000293968 SURF6O75683 361 aaKnown RBP17.77■□□□□ 0.43
CCNF-201ENST00000293968 HCLS1P14317 486 aaPredicted RBP17.77■□□□□ 0.43
CCNF-201ENST00000293968 AMPHP49418 695 aa17.77■□□□□ 0.43
CCNF-201ENST00000293968 WDR33Q9C0J8 1336 aaKnown RBP17.77■□□□□ 0.43
CCNF-201ENST00000293968 KIF24Q5T7B8 1368 aa17.77■□□□□ 0.43
CCNF-201ENST00000293968 YEATS2Q9ULM3 1422 aa17.77■□□□□ 0.43
CCNF-201ENST00000293968 DDX54Q8TDD1 881 aaKnown RBP17.76■□□□□ 0.43
CCNF-201ENST00000293968 MAP7D2Q96T17 732 aa17.76■□□□□ 0.43
CCNF-201ENST00000293968 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
CCNF-201ENST00000293968 GNAI3P08754 354 aa17.76■□□□□ 0.43
CCNF-201ENST00000293968 EDC4Q6P2E9 1401 aaKnown RBP17.76■□□□□ 0.43
CCNF-201ENST00000293968 MCM5P33992 734 aa17.75■□□□□ 0.43
CCNF-201ENST00000293968 FLIIQ13045 1269 aa17.75■□□□□ 0.43
CCNF-201ENST00000293968 UBTFL1P0CB47 393 aaPredicted RBP17.75■□□□□ 0.43
CCNF-201ENST00000293968 EIF2S2P20042 333 aaKnown RBP17.75■□□□□ 0.43
CCNF-201ENST00000293968 MTHFSDQ2M296 383 aaKnown RBP17.75■□□□□ 0.43
CCNF-201ENST00000293968 ADCY5O95622 1261 aa17.74■□□□□ 0.43
CCNF-201ENST00000293968 SMC3Q9UQE7 1217 aa17.74■□□□□ 0.43
CCNF-201ENST00000293968 SPC24Q8NBT2 197 aa17.74■□□□□ 0.43
CCNF-201ENST00000293968 PIK3C2BO00750 1634 aa17.74■□□□□ 0.43
CCNF-201ENST00000293968 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
CCNF-201ENST00000293968 DYNC1I1O14576 645 aa17.73■□□□□ 0.43
CCNF-201ENST00000293968 CPA1P15085 419 aa17.73■□□□□ 0.43
CCNF-201ENST00000293968 VPS37CA5D8V6 355 aaPredicted RBP17.73■□□□□ 0.43
CCNF-201ENST00000293968 NUTM2GQ5VZR2 741 aa17.73■□□□□ 0.43
CCNF-201ENST00000293968 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
CCNF-201ENST00000293968 SRCIN1Q9C0H9 1055 aa17.73■□□□□ 0.43
CCNF-201ENST00000293968 KCNJ4P48050 445 aa17.72■□□□□ 0.43
CCNF-201ENST00000293968 TERF1P54274 439 aa17.72■□□□□ 0.43
CCNF-201ENST00000293968 SPG7Q9UQ90 795 aa17.72■□□□□ 0.43
CCNF-201ENST00000293968 SIGLEC1Q9BZZ2 1709 aa17.72■□□□□ 0.43
CCNF-201ENST00000293968 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
CCNF-201ENST00000293968 GIMAP6Q6P9H5 292 aa17.71■□□□□ 0.43
CCNF-201ENST00000293968 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
CCNF-201ENST00000293968 CCDC183Q5T5S1 534 aa17.7■□□□□ 0.42
CCNF-201ENST00000293968 INTS4Q96HW7 963 aaKnown RBP17.7■□□□□ 0.42
CCNF-201ENST00000293968 OSBPL3Q9H4L5 887 aa17.7■□□□□ 0.42
CCNF-201ENST00000293968 ATP8B2P98198 1209 aa17.7■□□□□ 0.42
CCNF-201ENST00000293968 CUL4AQ13619 759 aa17.7■□□□□ 0.42
CCNF-201ENST00000293968 ATP7BP35670 1465 aa17.7■□□□□ 0.42
CCNF-201ENST00000293968 ACEP12821 1306 aa17.7■□□□□ 0.42
CCNF-201ENST00000293968 TTC21BQ7Z4L5 1316 aa17.7■□□□□ 0.42
CCNF-201ENST00000293968 ALKQ9UM73 1620 aa17.7■□□□□ 0.42
CCNF-201ENST00000293968 ANAPC15P60006 121 aa17.69■□□□□ 0.42
CCNF-201ENST00000293968 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
CCNF-201ENST00000293968 BCL11BQ9C0K0 894 aaPredicted RBP17.69■□□□□ 0.42
CCNF-201ENST00000293968 IL25Q9H293 177 aa17.69■□□□□ 0.42
CCNF-201ENST00000293968 RGS12O14924 1447 aa17.69■□□□□ 0.42
CCNF-201ENST00000293968 NOLC1Q14978 699 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCNF-201ENST00000293968 CCDC83Q8IWF9 413 aa17.69■□□□□ 0.42
CCNF-201ENST00000293968 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
CCNF-201ENST00000293968 AATKQ6ZMQ8 1374 aa17.69■□□□□ 0.42
CCNF-201ENST00000293968 SRGAP3O43295 1099 aa17.69■□□□□ 0.42
CCNF-201ENST00000293968 CASTP20810 708 aaKnown RBP17.69■□□□□ 0.42
CCNF-201ENST00000293968 DIAPH3Q9NSV4 1193 aa17.69■□□□□ 0.42
CCNF-201ENST00000293968 MAP3K19Q56UN5 1328 aa17.68■□□□□ 0.42
CCNF-201ENST00000293968 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
CCNF-201ENST00000293968 DRC7Q8IY82 874 aa17.68■□□□□ 0.42
CCNF-201ENST00000293968 KIAA0232Q92628 1395 aa17.68■□□□□ 0.42
CCNF-201ENST00000293968 STX6O43752 255 aa17.68■□□□□ 0.42
CCNF-201ENST00000293968 AK2P54819 239 aa17.68■□□□□ 0.42
CCNF-201ENST00000293968 METP08581 1390 aa17.67■□□□□ 0.42
CCNF-201ENST00000293968 PPP1R42Q7Z4L9 355 aa17.67■□□□□ 0.42
CCNF-201ENST00000293968 ZSCAN22P10073 491 aaPredicted RBP17.67■□□□□ 0.42
CCNF-201ENST00000293968 FAM184AQ8NB25 1140 aa17.67■□□□□ 0.42
CCNF-201ENST00000293968 KNDC1Q76NI1 1749 aa17.67■□□□□ 0.42
CCNF-201ENST00000293968 CHAF1AQ13111 956 aaPredicted RBP17.67■□□□□ 0.42
CCNF-201ENST00000293968 MTERF4Q7Z6M4 381 aaKnown RBP17.67■□□□□ 0.42
CCNF-201ENST00000293968 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.67■□□□□ 0.42
CCNF-201ENST00000293968 CPSF1Q10570 1443 aaKnown RBP17.67■□□□□ 0.42
CCNF-201ENST00000293968 HDGFL1Q5TGJ6 251 aa17.66■□□□□ 0.42
CCNF-201ENST00000293968 FERMT3Q86UX7 667 aa17.66■□□□□ 0.42
CCNF-201ENST00000293968 ARHGAP31Q2M1Z3 1444 aa17.66■□□□□ 0.42
CCNF-201ENST00000293968 PRR36Q9H6K5 1346 aa17.66■□□□□ 0.42
CCNF-201ENST00000293968 SYT1P21579 422 aa17.66■□□□□ 0.42
CCNF-201ENST00000293968 ATP6V1DQ9Y5K8 247 aa17.66■□□□□ 0.42
CCNF-201ENST00000293968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.66■□□□□ 0.42
CCNF-201ENST00000293968 CBX1P83916 185 aa17.65■□□□□ 0.42
CCNF-201ENST00000293968 CAMK4Q16566 473 aa17.65■□□□□ 0.42
CCNF-201ENST00000293968 CNTROBQ8N137 903 aa17.65■□□□□ 0.42
CCNF-201ENST00000293968 REREQ9P2R6 1566 aa17.65■□□□□ 0.42
CCNF-201ENST00000293968 CPS1P31327 1500 aa17.65■□□□□ 0.42
CCNF-201ENST00000293968 GOLGA6L4A6NEF3 574 aa17.65■□□□□ 0.42
CCNF-201ENST00000293968 DNM1Q05193 864 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms