RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 GNAI3P08754 354 aa24.78■■□□□ 1.56
CXCL16-201ENST00000293778 SNX21Q969T3 373 aa24.78■■□□□ 1.56
CXCL16-201ENST00000293778 EIF5BO60841 1220 aaKnown RBP24.78■■□□□ 1.56
CXCL16-201ENST00000293778 LMOD2Q6P5Q4 547 aa24.78■■□□□ 1.56
CXCL16-201ENST00000293778 LGR6Q9HBX8 967 aa24.78■■□□□ 1.56
CXCL16-201ENST00000293778 PLEKHG5O94827 1062 aa24.77■■□□□ 1.56
CXCL16-201ENST00000293778 PXDNLA1KZ92 1463 aa24.76■■□□□ 1.55
CXCL16-201ENST00000293778 PLEKHO1Q53GL0 409 aaPredicted RBP24.76■■□□□ 1.55
CXCL16-201ENST00000293778 ZNF530Q6P9A1 599 aaPredicted RBP24.76■■□□□ 1.55
CXCL16-201ENST00000293778 KIF2CQ99661 725 aa24.76■■□□□ 1.55
CXCL16-201ENST00000293778 AKAP4Q5JQC9 854 aa24.76■■□□□ 1.55
CXCL16-201ENST00000293778 LMO7Q8WWI1 1683 aa24.75■■□□□ 1.55
CXCL16-201ENST00000293778 TRPM3Q9HCF6 1732 aaPredicted RBP24.75■■□□□ 1.55
CXCL16-201ENST00000293778 N4BP2Q86UW6 1770 aaPredicted RBP24.75■■□□□ 1.55
CXCL16-201ENST00000293778 EIF4A1P60842 406 aaKnown RBP24.74■■□□□ 1.55
CXCL16-201ENST00000293778 KRT28Q7Z3Y7 464 aa24.74■■□□□ 1.55
CXCL16-201ENST00000293778 AMOTQ4VCS5 1084 aa24.74■■□□□ 1.55
CXCL16-201ENST00000293778 CHMP5Q9NZZ3 219 aa24.74■■□□□ 1.55
CXCL16-201ENST00000293778 NCAPD2Q15021 1401 aa24.73■■□□□ 1.55
CXCL16-201ENST00000293778 ANKRD24Q8TF21 1146 aa24.73■■□□□ 1.55
CXCL16-201ENST00000293778 C1orf167Q5SNV9 1468 aa24.73■■□□□ 1.55
CXCL16-201ENST00000293778 KIF1AQ12756 1690 aa24.73■■□□□ 1.55
CXCL16-201ENST00000293778 KDM3BQ7LBC6 1761 aa24.73■■□□□ 1.55
CXCL16-201ENST00000293778 TEFQ10587 303 aa24.73■■□□□ 1.55
CXCL16-201ENST00000293778 HOXB7P09629 217 aa24.72■■□□□ 1.55
CXCL16-201ENST00000293778 SDSP20132 328 aa24.72■■□□□ 1.55
CXCL16-201ENST00000293778 C19orf44Q9H6X5 657 aa24.71■■□□□ 1.55
CXCL16-201ENST00000293778 PHAXQ9H814 394 aaKnown RBP24.71■■□□□ 1.55
CXCL16-201ENST00000293778 NCOA3Q9Y6Q9 1424 aa24.71■■□□□ 1.55
CXCL16-201ENST00000293778 ATP8B2P98198 1209 aa24.71■■□□□ 1.55
CXCL16-201ENST00000293778 EIF2S2P20042 333 aaKnown RBP24.7■■□□□ 1.55
CXCL16-201ENST00000293778 MPRIPQ6WCQ1 1025 aa24.7■■□□□ 1.55
CXCL16-201ENST00000293778 CHMP4AQ9BY43 222 aa24.7■■□□□ 1.55
CXCL16-201ENST00000293778 C1orf141Q5JVX7 400 aa24.7■■□□□ 1.54
CXCL16-201ENST00000293778 EXOC6BQ9Y2D4 811 aa24.7■■□□□ 1.54
CXCL16-201ENST00000293778 BTBD11A6QL63 1104 aa24.69■■□□□ 1.54
CXCL16-201ENST00000293778 PNMA6EA0A0J9YXQ4 647 aa24.69■■□□□ 1.54
CXCL16-201ENST00000293778 CASC1Q6TDU7 716 aa24.69■■□□□ 1.54
CXCL16-201ENST00000293778 USP44Q9H0E7 712 aa24.69■■□□□ 1.54
CXCL16-201ENST00000293778 OSBPL3Q9H4L5 887 aa24.69■■□□□ 1.54
CXCL16-201ENST00000293778 LRRFIP2Q9Y608 721 aaKnown RBP24.69■■□□□ 1.54
CXCL16-201ENST00000293778 PXDNQ92626 1479 aa24.68■■□□□ 1.54
CXCL16-201ENST00000293778 KCNQ3O43525 872 aa24.68■■□□□ 1.54
CXCL16-201ENST00000293778 HSP90AB1P08238 724 aaKnown RBP24.68■■□□□ 1.54
CXCL16-201ENST00000293778 UBTFL1P0CB47 393 aaPredicted RBP24.67■■□□□ 1.54
CXCL16-201ENST00000293778 CAMTA1Q9Y6Y1 1673 aa24.67■■□□□ 1.54
CXCL16-201ENST00000293778 RNMTO43148 476 aaKnown RBP24.67■■□□□ 1.54
CXCL16-201ENST00000293778 PDE1AP54750 535 aa24.67■■□□□ 1.54
CXCL16-201ENST00000293778 LRRCC1Q9C099 1032 aa24.67■■□□□ 1.54
CXCL16-201ENST00000293778 AXIN2Q9Y2T1 843 aa24.67■■□□□ 1.54
CXCL16-201ENST00000293778 CHPF2Q9P2E5 772 aa24.66■■□□□ 1.54
CXCL16-201ENST00000293778 OVOS2A0A0G2JMS6 1433 aa24.66■■□□□ 1.54
CXCL16-201ENST00000293778 MST1RQ04912 1400 aa24.66■■□□□ 1.54
CXCL16-201ENST00000293778 SRCIN1Q9C0H9 1055 aa24.65■■□□□ 1.54
CXCL16-201ENST00000293778 IBTKQ9P2D0 1353 aaPredicted RBP24.64■■□□□ 1.54
CXCL16-201ENST00000293778 DDIT3P35638 169 aa24.64■■□□□ 1.54
CXCL16-201ENST00000293778 RBM42Q9BTD8 480 aaKnown RBP24.64■■□□□ 1.54
CXCL16-201ENST00000293778 USP26Q9BXU7 913 aa24.64■■□□□ 1.54
CXCL16-201ENST00000293778 CD2BP2O95400 341 aaKnown RBP24.63■■□□□ 1.53
CXCL16-201ENST00000293778 SALL3Q9BXA9 1300 aa24.63■■□□□ 1.53
CXCL16-201ENST00000293778 K7ELQ4 463 aaPredicted RBP24.62■■□□□ 1.53
CXCL16-201ENST00000293778 ALS2Q96Q42 1657 aa24.62■■□□□ 1.53
CXCL16-201ENST00000293778 PRKCSHP14314 528 aaPredicted RBP24.62■■□□□ 1.53
CXCL16-201ENST00000293778 ATF3P18847 181 aa24.62■■□□□ 1.53
CXCL16-201ENST00000293778 MCM4P33991 863 aa24.61■■□□□ 1.53
CXCL16-201ENST00000293778 DNAAF4Q8WXU2 420 aa24.61■■□□□ 1.53
CXCL16-201ENST00000293778 ZC3H6P61129 1189 aaKnown RBP24.61■■□□□ 1.53
CXCL16-201ENST00000293778 ERBB3P21860 1342 aa24.6■■□□□ 1.53
CXCL16-201ENST00000293778 RABEP1Q15276 862 aa24.6■■□□□ 1.53
CXCL16-201ENST00000293778 TMEM94Q12767 1356 aa24.6■■□□□ 1.53
CXCL16-201ENST00000293778 PI4KAP2A4QPH2 592 aa24.59■■□□□ 1.53
CXCL16-201ENST00000293778 MX1P20591 662 aa24.59■■□□□ 1.53
CXCL16-201ENST00000293778 PI4KAP1Q8N8J0 262 aa24.59■■□□□ 1.53
CXCL16-201ENST00000293778 SSH3Q8TE77 659 aa24.59■■□□□ 1.53
CXCL16-201ENST00000293778 CIZ1Q9ULV3 898 aaPredicted RBP24.59■■□□□ 1.53
CXCL16-201ENST00000293778 RGPD5Q99666 1765 aa24.59■■□□□ 1.53
CXCL16-201ENST00000293778 REC8O95072 547 aa24.59■■□□□ 1.53
CXCL16-201ENST00000293778 HSP90AA1P07900 732 aaKnown RBP24.58■■□□□ 1.53
CXCL16-201ENST00000293778 BEND3Q5T5X7 828 aa24.58■■□□□ 1.53
CXCL16-201ENST00000293778 DBF4Q9UBU7 674 aaPredicted RBP24.58■■□□□ 1.53
CXCL16-201ENST00000293778 ANXA1P04083 346 aa24.58■■□□□ 1.52
CXCL16-201ENST00000293778 ERC2O15083 957 aa24.57■■□□□ 1.52
CXCL16-201ENST00000293778 TSHZ3Q63HK5 1081 aa24.57■■□□□ 1.52
CXCL16-201ENST00000293778 LMTK3Q96Q04 1460 aa24.57■■□□□ 1.52
CXCL16-201ENST00000293778 GIGYF1O75420 1035 aaPredicted RBP24.57■■□□□ 1.52
CXCL16-201ENST00000293778 DCCP43146 1447 aa24.56■■□□□ 1.52
CXCL16-201ENST00000293778 PPP1R42Q7Z4L9 355 aa24.56■■□□□ 1.52
CXCL16-201ENST00000293778 ADCY9O60503 1353 aa24.56■■□□□ 1.52
CXCL16-201ENST00000293778 HEG1Q9ULI3 1381 aa24.56■■□□□ 1.52
CXCL16-201ENST00000293778 POLA2Q14181 598 aa24.55■■□□□ 1.52
CXCL16-201ENST00000293778 STAP2Q9UGK3 403 aa24.55■■□□□ 1.52
CXCL16-201ENST00000293778 NBPF7P0C2Y1 421 aaPredicted RBP24.55■■□□□ 1.52
CXCL16-201ENST00000293778 SIPA1L3O60292 1781 aaPredicted RBP24.54■■□□□ 1.52
CXCL16-201ENST00000293778 DDX17Q92841 729 aaKnown RBP24.54■■□□□ 1.52
CXCL16-201ENST00000293778 ADAMTS7Q9UKP4 1686 aa24.54■■□□□ 1.52
CXCL16-201ENST00000293778 RAB11FIP3O75154 756 aa24.54■■□□□ 1.52
CXCL16-201ENST00000293778 RAPGEF4Q8WZA2 1011 aa24.54■■□□□ 1.52
CXCL16-201ENST00000293778 TUBGCP6Q96RT7 1819 aa24.53■■□□□ 1.52
CXCL16-201ENST00000293778 NLRP2Q9NX02 1062 aa24.53■■□□□ 1.52
CXCL16-201ENST00000293778 STRCP1A6NGW2 1772 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms