RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 SMARCA5O60264 1052 aaPredicted RBP18.69■□□□□ 0.58
CCDC116-201ENST00000292779 CD2BP2O95400 341 aaKnown RBP18.69■□□□□ 0.58
CCDC116-201ENST00000292779 LTN1O94822 1766 aa18.68■□□□□ 0.58
CCDC116-201ENST00000292779 PXDNQ92626 1479 aa18.68■□□□□ 0.58
CCDC116-201ENST00000292779 HTATSF1O43719 755 aaKnown RBP18.68■□□□□ 0.58
CCDC116-201ENST00000292779 RBM42Q9BTD8 480 aaKnown RBP18.68■□□□□ 0.58
CCDC116-201ENST00000292779 NFAT5O94916 1531 aa18.67■□□□□ 0.58
CCDC116-201ENST00000292779 CCT4P50991 539 aaKnown RBP18.67■□□□□ 0.58
CCDC116-201ENST00000292779 FAM208AQ9UK61 1670 aaKnown RBP18.66■□□□□ 0.58
CCDC116-201ENST00000292779 STK31Q9BXU1 1019 aa18.66■□□□□ 0.58
CCDC116-201ENST00000292779 MED1Q15648 1581 aaPredicted RBP18.66■□□□□ 0.58
CCDC116-201ENST00000292779 USHBP1Q8N6Y0 703 aa18.65■□□□□ 0.58
CCDC116-201ENST00000292779 IL17REQ8NFR9 667 aa18.65■□□□□ 0.58
CCDC116-201ENST00000292779 HMMRO75330 724 aa18.65■□□□□ 0.58
CCDC116-201ENST00000292779 K7ELQ4 463 aaPredicted RBP18.64■□□□□ 0.57
CCDC116-201ENST00000292779 CABLES1Q8TDN4 633 aa18.64■□□□□ 0.57
CCDC116-201ENST00000292779 CACNA1FO60840 1977 aa18.64■□□□□ 0.57
CCDC116-201ENST00000292779 MAP3K5Q99683 1374 aa18.64■□□□□ 0.57
CCDC116-201ENST00000292779 SDSP20132 328 aa18.63■□□□□ 0.57
CCDC116-201ENST00000292779 EIF5BO60841 1220 aaKnown RBP18.63■□□□□ 0.57
CCDC116-201ENST00000292779 CIZ1Q9ULV3 898 aaPredicted RBP18.63■□□□□ 0.57
CCDC116-201ENST00000292779 FLIIQ13045 1269 aa18.62■□□□□ 0.57
CCDC116-201ENST00000292779 CCDC30Q5VVM6 783 aa18.62■□□□□ 0.57
CCDC116-201ENST00000292779 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
CCDC116-201ENST00000292779 TRAK2O60296 914 aa18.62■□□□□ 0.57
CCDC116-201ENST00000292779 HSP90AA1P07900 732 aaKnown RBP18.62■□□□□ 0.57
CCDC116-201ENST00000292779 FOXD4L1Q9NU39 408 aa18.62■□□□□ 0.57
CCDC116-201ENST00000292779 GNAI2P04899 355 aa18.61■□□□□ 0.57
CCDC116-201ENST00000292779 FKBP5Q13451 457 aaPredicted RBP18.61■□□□□ 0.57
CCDC116-201ENST00000292779 TNPO1Q92973 898 aaKnown RBP18.61■□□□□ 0.57
CCDC116-201ENST00000292779 USP26Q9BXU7 913 aa18.61■□□□□ 0.57
CCDC116-201ENST00000292779 GZF1Q9H116 711 aaPredicted RBP18.61■□□□□ 0.57
CCDC116-201ENST00000292779 SLIT3O75094 1523 aa18.61■□□□□ 0.57
CCDC116-201ENST00000292779 NPHP3Q7Z494 1330 aa18.61■□□□□ 0.57
CCDC116-201ENST00000292779 RGPD5Q99666 1765 aa18.61■□□□□ 0.57
CCDC116-201ENST00000292779 ZBTB7CA1YPR0 619 aa18.61■□□□□ 0.57
CCDC116-201ENST00000292779 GCP02774 474 aa18.61■□□□□ 0.57
CCDC116-201ENST00000292779 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
CCDC116-201ENST00000292779 IP6K1Q92551 441 aa18.61■□□□□ 0.57
CCDC116-201ENST00000292779 RGPD2P0DJD1 1756 aa18.6■□□□□ 0.57
CCDC116-201ENST00000292779 DDX11L8A8MPP1 907 aa18.6■□□□□ 0.57
CCDC116-201ENST00000292779 CRYBG1Q9Y4K1 1723 aa18.6■□□□□ 0.57
CCDC116-201ENST00000292779 RAB3GAP1Q15042 981 aa18.59■□□□□ 0.57
CCDC116-201ENST00000292779 L1TD1Q5T7N2 865 aaKnown RBP18.59■□□□□ 0.57
CCDC116-201ENST00000292779 NBPF6Q5VWK0 638 aa18.58■□□□□ 0.57
CCDC116-201ENST00000292779 CASC1Q6TDU7 716 aa18.58■□□□□ 0.57
CCDC116-201ENST00000292779 NBPF4Q96M43 638 aa18.58■□□□□ 0.57
CCDC116-201ENST00000292779 SPATA31A3Q5VYP0 1347 aa18.58■□□□□ 0.57
CCDC116-201ENST00000292779 RABEP1Q15276 862 aa18.58■□□□□ 0.56
CCDC116-201ENST00000292779 NHSL1Q5SYE7 1610 aa18.58■□□□□ 0.56
CCDC116-201ENST00000292779 TNS3Q68CZ2 1445 aa18.58■□□□□ 0.56
CCDC116-201ENST00000292779 EXOC6BQ9Y2D4 811 aa18.58■□□□□ 0.56
CCDC116-201ENST00000292779 N4BP2Q86UW6 1770 aaPredicted RBP18.57■□□□□ 0.56
CCDC116-201ENST00000292779 ROBO1Q9Y6N7 1651 aa18.57■□□□□ 0.56
CCDC116-201ENST00000292779 PHRF1Q9P1Y6 1649 aaKnown RBP18.57■□□□□ 0.56
CCDC116-201ENST00000292779 BABAM1Q9NWV8 329 aa18.57■□□□□ 0.56
CCDC116-201ENST00000292779 SOS1Q07889 1333 aaPredicted RBP18.57■□□□□ 0.56
CCDC116-201ENST00000292779 GNAI3P08754 354 aa18.57■□□□□ 0.56
CCDC116-201ENST00000292779 PDE1AP54750 535 aa18.57■□□□□ 0.56
CCDC116-201ENST00000292779 ZC3H6P61129 1189 aaKnown RBP18.57■□□□□ 0.56
CCDC116-201ENST00000292779 OSBPL3Q9H4L5 887 aa18.57■□□□□ 0.56
CCDC116-201ENST00000292779 SOS2Q07890 1332 aaPredicted RBP18.56■□□□□ 0.56
CCDC116-201ENST00000292779 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
CCDC116-201ENST00000292779 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
CCDC116-201ENST00000292779 PNMA6EA0A0J9YXQ4 647 aa18.55■□□□□ 0.56
CCDC116-201ENST00000292779 FSD2A1L4K1 749 aa18.55■□□□□ 0.56
CCDC116-201ENST00000292779 ARHGEF25Q86VW2 580 aa18.55■□□□□ 0.56
CCDC116-201ENST00000292779 KCNH5Q8NCM2 988 aa18.55■□□□□ 0.56
CCDC116-201ENST00000292779 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
CCDC116-201ENST00000292779 ARXQ96QS3 562 aa18.55■□□□□ 0.56
CCDC116-201ENST00000292779 AK9Q5TCS8 1911 aa18.55■□□□□ 0.56
CCDC116-201ENST00000292779 GOLGA6L3A6NEY3 463 aa18.54■□□□□ 0.56
CCDC116-201ENST00000292779 CEMIPQ8WUJ3 1361 aa18.54■□□□□ 0.56
CCDC116-201ENST00000292779 TUBGCP6Q96RT7 1819 aa18.54■□□□□ 0.56
CCDC116-201ENST00000292779 ATP8B2P98198 1209 aa18.54■□□□□ 0.56
CCDC116-201ENST00000292779 LRRC59Q96AG4 307 aaKnown RBP18.53■□□□□ 0.56
CCDC116-201ENST00000292779 LRRCC1Q9C099 1032 aa18.53■□□□□ 0.56
CCDC116-201ENST00000292779 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
CCDC116-201ENST00000292779 REC8O95072 547 aa18.53■□□□□ 0.56
CCDC116-201ENST00000292779 HDGFL1Q5TGJ6 251 aa18.53■□□□□ 0.56
CCDC116-201ENST00000292779 LRRFIP2Q9Y608 721 aaKnown RBP18.53■□□□□ 0.56
CCDC116-201ENST00000292779 PXDNLA1KZ92 1463 aa18.53■□□□□ 0.56
CCDC116-201ENST00000292779 SALL3Q9BXA9 1300 aa18.52■□□□□ 0.56
CCDC116-201ENST00000292779 ERC2O15083 957 aa18.52■□□□□ 0.56
CCDC116-201ENST00000292779 TSHZ3Q63HK5 1081 aa18.52■□□□□ 0.56
CCDC116-201ENST00000292779 PHAXQ9H814 394 aaKnown RBP18.52■□□□□ 0.55
CCDC116-201ENST00000292779 COL18A1P39060 1754 aa18.51■□□□□ 0.55
CCDC116-201ENST00000292779 XRCC6P12956 609 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCDC116-201ENST00000292779 SSFA2P28290 1259 aa18.51■□□□□ 0.55
CCDC116-201ENST00000292779 USP44Q9H0E7 712 aa18.51■□□□□ 0.55
CCDC116-201ENST00000292779 IBTKQ9P2D0 1353 aaPredicted RBP18.51■□□□□ 0.55
CCDC116-201ENST00000292779 ABCA3Q99758 1704 aa18.5■□□□□ 0.55
CCDC116-201ENST00000292779 CHRNA2Q15822 529 aa18.5■□□□□ 0.55
CCDC116-201ENST00000292779 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
CCDC116-201ENST00000292779 UBTFL1P0CB47 393 aaPredicted RBP18.49■□□□□ 0.55
CCDC116-201ENST00000292779 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
CCDC116-201ENST00000292779 MX1P20591 662 aa18.49■□□□□ 0.55
CCDC116-201ENST00000292779 EIF4A1P60842 406 aaKnown RBP18.49■□□□□ 0.55
CCDC116-201ENST00000292779 KCNQ3O43525 872 aa18.47■□□□□ 0.55
CCDC116-201ENST00000292779 ST18O60284 1047 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms