RNA–Protein interactions for RNA: ENST00000290417.6

GFRA4-201, Transcript of GDNF family receptor alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA4, Length 1,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-201ENST00000290417 TUBGCP6Q96RT7 1819 aa30.15■■■□□ 2.42
GFRA4-201ENST00000290417 PDGFDQ9GZP0 370 aaPredicted RBP30.15■■■□□ 2.42
GFRA4-201ENST00000290417 MAP3K5Q99683 1374 aa30.15■■■□□ 2.42
GFRA4-201ENST00000290417 LOC102724428A0A0B4J2F2 783 aa30.14■■■□□ 2.42
GFRA4-201ENST00000290417 SIK1P57059 783 aa30.14■■■□□ 2.42
GFRA4-201ENST00000290417 GNAT3A8MTJ3 354 aa30.13■■■□□ 2.41
GFRA4-201ENST00000290417 QSER1Q2KHR3 1735 aa30.13■■■□□ 2.41
GFRA4-201ENST00000290417 SLC52A2Q9HAB3 445 aa30.13■■■□□ 2.41
GFRA4-201ENST00000290417 TFCP2L1Q9NZI6 479 aa30.12■■■□□ 2.41
GFRA4-201ENST00000290417 MRC1P22897 1456 aa30.11■■■□□ 2.41
GFRA4-201ENST00000290417 HMGB2P26583 209 aaKnown RBP30.1■■■□□ 2.41
GFRA4-201ENST00000290417 RBM42Q9BTD8 480 aaKnown RBP30.1■■■□□ 2.41
GFRA4-201ENST00000290417 C4BP0C0L5 1744 aa30.1■■■□□ 2.41
GFRA4-201ENST00000290417 ATP6V1AP38606 617 aa30.09■■■□□ 2.41
GFRA4-201ENST00000290417 NEFMP07197 916 aa30.08■■■□□ 2.41
GFRA4-201ENST00000290417 ZBTB7AO95365 584 aa30.06■■■□□ 2.4
GFRA4-201ENST00000290417 IL17REQ8NFR9 667 aa30.06■■■□□ 2.4
GFRA4-201ENST00000290417 ZNF831Q5JPB2 1677 aa30.06■■■□□ 2.4
GFRA4-201ENST00000290417 ITPK1Q13572 414 aa30.05■■■□□ 2.4
GFRA4-201ENST00000290417 SPON1Q9HCB6 807 aa30.05■■■□□ 2.4
GFRA4-201ENST00000290417 PNPLA7Q6ZV29 1317 aa30.05■■■□□ 2.4
GFRA4-201ENST00000290417 PTCD1O75127 700 aaKnown RBP30.05■■■□□ 2.4
GFRA4-201ENST00000290417 LINC00116Q8NCU8 138 aa30.05■■■□□ 2.4
GFRA4-201ENST00000290417 PNNQ9H307 717 aaKnown RBP30.05■■■□□ 2.4
GFRA4-201ENST00000290417 DLG5Q8TDM6 1919 aa30.04■■■□□ 2.4
GFRA4-201ENST00000290417 SLC4A9Q96Q91 983 aa30.04■■■□□ 2.4
GFRA4-201ENST00000290417 PLEKHF1Q96S99 279 aa30.04■■■□□ 2.4
GFRA4-201ENST00000290417 SIPA1L3O60292 1781 aaPredicted RBP30.03■■■□□ 2.4
GFRA4-201ENST00000290417 TEFQ10587 303 aa30.03■■■□□ 2.4
GFRA4-201ENST00000290417 AK7Q96M32 723 aa30.03■■■□□ 2.4
GFRA4-201ENST00000290417 SLC39A6Q13433 755 aa30.02■■■□□ 2.4
GFRA4-201ENST00000290417 ATF5Q9Y2D1 282 aaPredicted RBP30.02■■■□□ 2.4
GFRA4-201ENST00000290417 RTF1Q92541 710 aaKnown RBP30.01■■■□□ 2.39
GFRA4-201ENST00000290417 MAPK8IP3Q9UPT6 1336 aa30■■■□□ 2.39
GFRA4-201ENST00000290417 COL5A3P25940 1745 aaPredicted RBP30■■■□□ 2.39
GFRA4-201ENST00000290417 UBR3Q6ZT12 1888 aa30■■■□□ 2.39
GFRA4-201ENST00000290417 CEMIPQ8WUJ3 1361 aa29.99■■■□□ 2.39
GFRA4-201ENST00000290417 WDR43Q15061 677 aaKnown RBP eCLIP29.99■■■□□ 2.39
GFRA4-201ENST00000290417 MTFR1LQ9H019 292 aa29.99■■■□□ 2.39
GFRA4-201ENST00000290417 MSH5O43196 834 aa29.98■■■□□ 2.39
GFRA4-201ENST00000290417 TJP1Q07157 1748 aa29.98■■■□□ 2.39
GFRA4-201ENST00000290417 MCM10Q7L590 875 aa29.97■■■□□ 2.39
GFRA4-201ENST00000290417 COL23A1Q86Y22 540 aaPredicted RBP29.96■■■□□ 2.39
GFRA4-201ENST00000290417 UBR2Q8IWV8 1755 aa29.96■■■□□ 2.39
GFRA4-201ENST00000290417 DCTN1Q14203 1278 aa29.96■■■□□ 2.39
GFRA4-201ENST00000290417 KCPQ6ZWJ8 1503 aa29.95■■■□□ 2.39
GFRA4-201ENST00000290417 GNPATO15228 680 aa29.95■■■□□ 2.38
GFRA4-201ENST00000290417 ANP32CO43423 234 aa29.95■■■□□ 2.38
GFRA4-201ENST00000290417 HTATSF1O43719 755 aaKnown RBP29.95■■■□□ 2.38
GFRA4-201ENST00000290417 NFE2L2Q16236 605 aa29.95■■■□□ 2.38
GFRA4-201ENST00000290417 SLC16A10Q8TF71 515 aa29.95■■■□□ 2.38
GFRA4-201ENST00000290417 PPP1R1BQ9UD71 204 aaPredicted RBP29.95■■■□□ 2.38
GFRA4-201ENST00000290417 CICQ96RK0 1608 aaPredicted RBP29.94■■■□□ 2.38
GFRA4-201ENST00000290417 PHF14O94880 888 aa29.94■■■□□ 2.38
GFRA4-201ENST00000290417 AMIGO3Q86WK7 504 aa29.94■■■□□ 2.38
GFRA4-201ENST00000290417 TTC5Q8N0Z6 440 aa29.94■■■□□ 2.38
GFRA4-201ENST00000290417 FLAD1Q8NFF5 587 aa29.94■■■□□ 2.38
GFRA4-201ENST00000290417 SMIM5Q71RC9 77 aa29.93■■■□□ 2.38
GFRA4-201ENST00000290417 PTGER2P43116 358 aa29.92■■■□□ 2.38
GFRA4-201ENST00000290417 CCDC146Q8IYE0 955 aa29.92■■■□□ 2.38
GFRA4-201ENST00000290417 ADAMTS8Q9UP79 889 aa29.92■■■□□ 2.38
GFRA4-201ENST00000290417 MYH14Q7Z406 1995 aaKnown RBP29.91■■■□□ 2.38
GFRA4-201ENST00000290417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.9■■■□□ 2.38
GFRA4-201ENST00000290417 BTBD11A6QL63 1104 aa29.9■■■□□ 2.38
GFRA4-201ENST00000290417 ZNF790Q6PG37 636 aa29.9■■■□□ 2.38
GFRA4-201ENST00000290417 CNTNAP4Q9C0A0 1308 aa29.9■■■□□ 2.38
GFRA4-201ENST00000290417 SSFA2P28290 1259 aa29.89■■■□□ 2.38
GFRA4-201ENST00000290417 RC3H1Q5TC82 1133 aaKnown RBP29.89■■■□□ 2.38
GFRA4-201ENST00000290417 DNAJC10Q8IXB1 793 aa29.88■■■□□ 2.37
GFRA4-201ENST00000290417 COL24A1Q17RW2 1714 aa29.88■■■□□ 2.37
GFRA4-201ENST00000290417 CRKLP46109 303 aaKnown RBP29.88■■■□□ 2.37
GFRA4-201ENST00000290417 RTCBQ9Y3I0 505 aaKnown RBP29.88■■■□□ 2.37
GFRA4-201ENST00000290417 CCDC184Q52MB2 194 aa29.87■■■□□ 2.37
GFRA4-201ENST00000290417 SGIP1Q9BQI5 828 aa29.87■■■□□ 2.37
GFRA4-201ENST00000290417 RIPK4P57078 832 aa29.86■■■□□ 2.37
GFRA4-201ENST00000290417 RUNDC1Q96C34 613 aa29.86■■■□□ 2.37
GFRA4-201ENST00000290417 KCNQ3O43525 872 aa29.85■■■□□ 2.37
GFRA4-201ENST00000290417 MSL1Q68DK7 614 aa29.85■■■□□ 2.37
GFRA4-201ENST00000290417 VSIG10Q8N0Z9 540 aa29.85■■■□□ 2.37
GFRA4-201ENST00000290417 ZNF496Q96IT1 587 aaPredicted RBP29.85■■■□□ 2.37
GFRA4-201ENST00000290417 TMPOP42166 694 aaKnown RBP29.84■■■□□ 2.37
GFRA4-201ENST00000290417 THUMPD2Q9BTF0 503 aaKnown RBP29.84■■■□□ 2.37
GFRA4-201ENST00000290417 RPS6KA4O75676 772 aa29.83■■■□□ 2.37
GFRA4-201ENST00000290417 TAF7Q15545 349 aaPredicted RBP29.83■■■□□ 2.37
GFRA4-201ENST00000290417 HEG1Q9ULI3 1381 aa29.83■■■□□ 2.37
GFRA4-201ENST00000290417 POLD1P28340 1107 aa29.82■■■□□ 2.36
GFRA4-201ENST00000290417 TRAPPC3LQ5T215 181 aa29.82■■■□□ 2.36
GFRA4-201ENST00000290417 FMNL2Q96PY5 1086 aa29.82■■■□□ 2.36
GFRA4-201ENST00000290417 RRP7AQ9Y3A4 280 aaKnown RBP29.82■■■□□ 2.36
GFRA4-201ENST00000290417 CYP19A1P11511 503 aaPredicted RBP29.81■■■□□ 2.36
GFRA4-201ENST00000290417 NEUROD2Q15784 382 aa29.81■■■□□ 2.36
GFRA4-201ENST00000290417 INTS5Q6P9B9 1019 aaKnown RBP29.8■■■□□ 2.36
GFRA4-201ENST00000290417 ARXQ96QS3 562 aa29.8■■■□□ 2.36
GFRA4-201ENST00000290417 CCDC87Q9NVE4 849 aa29.8■■■□□ 2.36
GFRA4-201ENST00000290417 MIS18AQ9NYP9 233 aa29.79■■■□□ 2.36
GFRA4-201ENST00000290417 C4AP0C0L4 1744 aa29.79■■■□□ 2.36
GFRA4-201ENST00000290417 ADRA2BP18089 450 aa29.79■■■□□ 2.36
GFRA4-201ENST00000290417 MRS2Q9HD23 443 aa29.79■■■□□ 2.36
GFRA4-201ENST00000290417 LMOD3Q0VAK6 560 aa29.78■■■□□ 2.36
GFRA4-201ENST00000290417 ARHGEF1Q92888 912 aaKnown RBP29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms