RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 IFNL2Q8IZJ0 200 aa12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 FNBP4Q8N3X1 1017 aaPredicted RBP12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 USP21Q9UK80 565 aa12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
LRTOMT-201ENST00000289488 KCNQ3O43525 872 aa12.38□□□□□ -0.43
LRTOMT-201ENST00000289488 SCN11AQ9UI33 1791 aa12.38□□□□□ -0.43
LRTOMT-201ENST00000289488 TEFQ10587 303 aa12.38□□□□□ -0.43
LRTOMT-201ENST00000289488 NFATC2IPQ8NCF5 419 aa12.38□□□□□ -0.43
LRTOMT-201ENST00000289488 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
LRTOMT-201ENST00000289488 DISP2A7MBM2 1401 aa12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 TAF7Q15545 349 aaPredicted RBP12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 FAM98CQ17RN3 349 aaKnown RBP12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 AFF2P51816 1311 aa12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 PCDH11XQ9BZA7 1347 aa12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 PCDH11YQ9BZA8 1340 aa12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 WNK3Q9BYP7 1800 aa12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 GSE1Q14687 1217 aa12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 C20orf194Q5TEA3 1177 aa12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 EXOC6Q8TAG9 804 aa12.37□□□□□ -0.43
LRTOMT-201ENST00000289488 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
LRTOMT-201ENST00000289488 VAMP4O75379 141 aa12.36□□□□□ -0.43
LRTOMT-201ENST00000289488 SLC39A6Q13433 755 aa12.36□□□□□ -0.43
LRTOMT-201ENST00000289488 TWISTNBQ3B726 338 aaPredicted RBP12.36□□□□□ -0.43
LRTOMT-201ENST00000289488 SSH1Q8WYL5 1049 aa12.36□□□□□ -0.43
LRTOMT-201ENST00000289488 SIPA1L3O60292 1781 aaPredicted RBP12.35□□□□□ -0.43
LRTOMT-201ENST00000289488 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
LRTOMT-201ENST00000289488 FRAT1Q92837 279 aaPredicted RBP12.35□□□□□ -0.43
LRTOMT-201ENST00000289488 DCAF5Q96JK2 942 aa12.35□□□□□ -0.43
LRTOMT-201ENST00000289488 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
LRTOMT-201ENST00000289488 VPS72Q15906 364 aa12.34□□□□□ -0.43
LRTOMT-201ENST00000289488 TNNQ9UQP3 1299 aa12.34□□□□□ -0.43
LRTOMT-201ENST00000289488 EXOC5O00471 708 aa12.34□□□□□ -0.43
LRTOMT-201ENST00000289488 NECTIN2Q92692 538 aa12.34□□□□□ -0.43
LRTOMT-201ENST00000289488 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
LRTOMT-201ENST00000289488 TOGARAM1Q9Y4F4 1720 aa12.33□□□□□ -0.43
LRTOMT-201ENST00000289488 A0A0G2JS52 829 aa12.33□□□□□ -0.44
LRTOMT-201ENST00000289488 SMC4Q9NTJ3 1288 aa12.33□□□□□ -0.44
LRTOMT-201ENST00000289488 KDM3BQ7LBC6 1761 aa12.33□□□□□ -0.44
LRTOMT-201ENST00000289488 DDB1Q16531 1140 aa12.33□□□□□ -0.44
LRTOMT-201ENST00000289488 PRAMEF22A3QJZ6 481 aa12.32□□□□□ -0.44
LRTOMT-201ENST00000289488 THRAP3Q9Y2W1 955 aaKnown RBP12.32□□□□□ -0.44
LRTOMT-201ENST00000289488 FAM182BQ5T319 152 aa12.32□□□□□ -0.44
LRTOMT-201ENST00000289488 CABP4P57796 275 aa12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 MARCH10Q8NA82 808 aaPredicted RBP12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 GLI3P10071 1580 aa12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 NFKBIBQ15653 356 aa12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 TNS2Q63HR2 1409 aa12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 PLEKHG2Q9H7P9 1386 aa12.31□□□□□ -0.44
LRTOMT-201ENST00000289488 ITGB4P16144 1822 aa12.3□□□□□ -0.44
LRTOMT-201ENST00000289488 HSP90AB1P08238 724 aaKnown RBP12.3□□□□□ -0.44
LRTOMT-201ENST00000289488 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
LRTOMT-201ENST00000289488 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
LRTOMT-201ENST00000289488 GJD4Q96KN9 370 aaPredicted RBP12.3□□□□□ -0.44
LRTOMT-201ENST00000289488 QTRT2Q9H974 415 aaKnown RBP12.3□□□□□ -0.44
LRTOMT-201ENST00000289488 CT47B1P0C2W7 299 aaPredicted RBP12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 CANXP27824 592 aaKnown RBP12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 PANK1Q8TE04 598 aa12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 FBXO41Q8TF61 875 aa12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 NOB1Q9ULX3 412 aaKnown RBP12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 RLBP1P12271 317 aa12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 EIF2S2P20042 333 aaKnown RBP12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 MRC1P22897 1456 aa12.29□□□□□ -0.44
LRTOMT-201ENST00000289488 ZNF496Q96IT1 587 aaPredicted RBP12.28□□□□□ -0.44
LRTOMT-201ENST00000289488 PIGBQ92521 554 aa12.28□□□□□ -0.44
LRTOMT-201ENST00000289488 CDCA7Q9BWT1 371 aaPredicted RBP12.28□□□□□ -0.44
LRTOMT-201ENST00000289488 BABAM1Q9NWV8 329 aa12.28□□□□□ -0.44
LRTOMT-201ENST00000289488 DOT1LQ8TEK3 1739 aa12.27□□□□□ -0.44
LRTOMT-201ENST00000289488 ERVV-2B6SEH9 535 aa12.27□□□□□ -0.44
LRTOMT-201ENST00000289488 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.44
LRTOMT-201ENST00000289488 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.44
LRTOMT-201ENST00000289488 CRBNQ96SW2 442 aa12.27□□□□□ -0.44
LRTOMT-201ENST00000289488 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.44
LRTOMT-201ENST00000289488 PTCD1O75127 700 aaKnown RBP12.27□□□□□ -0.45
LRTOMT-201ENST00000289488 ANXA1P04083 346 aa12.27□□□□□ -0.45
LRTOMT-201ENST00000289488 SLC4A2P04920 1241 aa12.27□□□□□ -0.45
LRTOMT-201ENST00000289488 TRIM27P14373 513 aa12.27□□□□□ -0.45
LRTOMT-201ENST00000289488 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
LRTOMT-201ENST00000289488 ATRNO75882 1429 aa12.27□□□□□ -0.45
LRTOMT-201ENST00000289488 KCNQ2O43526 872 aa12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 GIGYF1O75420 1035 aaPredicted RBP12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 ALDH1L2Q3SY69 923 aa12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 G2E3Q7L622 706 aa12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 PTF1AQ7RTS3 328 aa12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 TMOD3Q9NYL9 352 aa12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 C5P01031 1676 aa12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
LRTOMT-201ENST00000289488 PIP4K2AP48426 406 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms