RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 U2SURPO15042 1029 aaKnown RBP9.18□□□□□ -0.94
SSX2B-201ENST00000288839 CASZ1Q86V15 1759 aa9.18□□□□□ -0.94
SSX2B-201ENST00000288839 TOGARAM1Q9Y4F4 1720 aa9.18□□□□□ -0.94
SSX2B-201ENST00000288839 MYBBP1AQ9BQG0 1328 aaKnown RBP9.17□□□□□ -0.94
SSX2B-201ENST00000288839 BCL11BQ9C0K0 894 aaPredicted RBP9.17□□□□□ -0.94
SSX2B-201ENST00000288839 PRKRIP1Q9H875 184 aaPredicted RBP9.17□□□□□ -0.94
SSX2B-201ENST00000288839 FBXO3Q9UK99 471 aa9.17□□□□□ -0.94
SSX2B-201ENST00000288839 KAT6BQ8WYB5 2073 aa9.17□□□□□ -0.94
SSX2B-201ENST00000288839 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
SSX2B-201ENST00000288839 CYP27B1O15528 508 aa9.16□□□□□ -0.94
SSX2B-201ENST00000288839 SPG7Q9UQ90 795 aa9.16□□□□□ -0.94
SSX2B-201ENST00000288839 KDRP35968 1356 aa9.15□□□□□ -0.94
SSX2B-201ENST00000288839 PCDH11XQ9BZA7 1347 aa9.15□□□□□ -0.94
SSX2B-201ENST00000288839 PCDH11YQ9BZA8 1340 aa9.15□□□□□ -0.94
SSX2B-201ENST00000288839 PKD1L3Q7Z443 1732 aa9.15□□□□□ -0.94
SSX2B-201ENST00000288839 U2AF1L5P0DN76 240 aaPredicted RBP9.15□□□□□ -0.94
SSX2B-201ENST00000288839 KCNQ4P56696 695 aa9.15□□□□□ -0.94
SSX2B-201ENST00000288839 U2AF1Q01081 240 aaKnown RBP eCLIP9.15□□□□□ -0.94
SSX2B-201ENST00000288839 NUDCQ9Y266 331 aa9.15□□□□□ -0.94
SSX2B-201ENST00000288839 TUBGCP6Q96RT7 1819 aa9.15□□□□□ -0.95
SSX2B-201ENST00000288839 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
SSX2B-201ENST00000288839 PLEKHO1Q53GL0 409 aaPredicted RBP9.14□□□□□ -0.95
SSX2B-201ENST00000288839 ZNF530Q6P9A1 599 aaPredicted RBP9.14□□□□□ -0.95
SSX2B-201ENST00000288839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.14□□□□□ -0.95
SSX2B-201ENST00000288839 ANP32CO43423 234 aa9.13□□□□□ -0.95
SSX2B-201ENST00000288839 PHKG2P15735 406 aa9.13□□□□□ -0.95
SSX2B-201ENST00000288839 PRKAR2BP31323 418 aa9.13□□□□□ -0.95
SSX2B-201ENST00000288839 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
SSX2B-201ENST00000288839 TXNRD1Q16881 649 aa9.13□□□□□ -0.95
SSX2B-201ENST00000288839 ZNF827Q17R98 1081 aa9.13□□□□□ -0.95
SSX2B-201ENST00000288839 SYTL4Q96C24 671 aaPredicted RBP9.13□□□□□ -0.95
SSX2B-201ENST00000288839 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
SSX2B-201ENST00000288839 TSPYL2Q9H2G4 693 aaPredicted RBP9.13□□□□□ -0.95
SSX2B-201ENST00000288839 PLSCR1O15162 318 aa9.12□□□□□ -0.95
SSX2B-201ENST00000288839 AMOTQ4VCS5 1084 aa9.12□□□□□ -0.95
SSX2B-201ENST00000288839 IFNL2Q8IZJ0 200 aa9.12□□□□□ -0.95
SSX2B-201ENST00000288839 ZNF579Q8NAF0 562 aaKnown RBP9.12□□□□□ -0.95
SSX2B-201ENST00000288839 LRRC4BQ9NT99 713 aa9.12□□□□□ -0.95
SSX2B-201ENST00000288839 LY75O60449 1722 aa9.11□□□□□ -0.95
SSX2B-201ENST00000288839 ZBTB7AO95365 584 aa9.11□□□□□ -0.95
SSX2B-201ENST00000288839 NKX1-1Q15270 411 aaPredicted RBP9.11□□□□□ -0.95
SSX2B-201ENST00000288839 MTHFSDQ2M296 383 aaKnown RBP9.11□□□□□ -0.95
SSX2B-201ENST00000288839 CCDC184Q52MB2 194 aa9.11□□□□□ -0.95
SSX2B-201ENST00000288839 C1orf141Q5JVX7 400 aa9.11□□□□□ -0.95
SSX2B-201ENST00000288839 RASEFQ8IZ41 740 aa9.11□□□□□ -0.95
SSX2B-201ENST00000288839 PHACTR3Q96KR7 559 aa9.11□□□□□ -0.95
SSX2B-201ENST00000288839 PHF12Q96QT6 1004 aa9.11□□□□□ -0.95
SSX2B-201ENST00000288839 FCHSD2O94868 740 aa9.1□□□□□ -0.95
SSX2B-201ENST00000288839 NBPF14Q5TI25 921 aa9.1□□□□□ -0.95
SSX2B-201ENST00000288839 MPRIPQ6WCQ1 1025 aa9.1□□□□□ -0.95
SSX2B-201ENST00000288839 KDM6AO15550 1401 aaPredicted RBP9.1□□□□□ -0.95
SSX2B-201ENST00000288839 PLEKHG2Q9H7P9 1386 aa9.1□□□□□ -0.95
SSX2B-201ENST00000288839 AKAP4Q5JQC9 854 aa9.09□□□□□ -0.95
SSX2B-201ENST00000288839 PIGBQ92521 554 aa9.09□□□□□ -0.95
SSX2B-201ENST00000288839 ITGB4P16144 1822 aa9.09□□□□□ -0.95
SSX2B-201ENST00000288839 C5P01031 1676 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 HSP90AB1P08238 724 aaKnown RBP9.08□□□□□ -0.96
SSX2B-201ENST00000288839 WDR43Q15061 677 aaKnown RBP eCLIP9.08□□□□□ -0.96
SSX2B-201ENST00000288839 SLC15A2Q16348 729 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 CCDC146Q8IYE0 955 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 GAS2L2Q8NHY3 880 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 DCAF5Q96JK2 942 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 DCBLD2Q96PD2 775 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 PLEKHF1Q96S99 279 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 LGR6Q9HBX8 967 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 STK32BQ9NY57 414 aa9.08□□□□□ -0.96
SSX2B-201ENST00000288839 RNMTO43148 476 aaKnown RBP9.07□□□□□ -0.96
SSX2B-201ENST00000288839 NUBP1P53384 320 aa9.07□□□□□ -0.96
SSX2B-201ENST00000288839 MRS2Q9HD23 443 aa9.07□□□□□ -0.96
SSX2B-201ENST00000288839 TMOD3Q9NYL9 352 aa9.07□□□□□ -0.96
SSX2B-201ENST00000288839 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
SSX2B-201ENST00000288839 MAP3K5Q99683 1374 aa9.07□□□□□ -0.96
SSX2B-201ENST00000288839 GNAT3A8MTJ3 354 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 ERVV-2B6SEH9 535 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 NEFMP07197 916 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 PTGER2P43116 358 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 CABP4P57796 275 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 SMIM5Q71RC9 77 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 AMIGO3Q86WK7 504 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 ASAP1Q9ULH1 1129 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 PALLDQ8WX93 1383 aa9.06□□□□□ -0.96
SSX2B-201ENST00000288839 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
SSX2B-201ENST00000288839 MAPK8IP3Q9UPT6 1336 aa9.05□□□□□ -0.96
SSX2B-201ENST00000288839 TAF1LQ8IZX4 1826 aa9.05□□□□□ -0.96
SSX2B-201ENST00000288839 DCTN1Q14203 1278 aa9.05□□□□□ -0.96
SSX2B-201ENST00000288839 NFATC2IPQ8NCF5 419 aa9.05□□□□□ -0.96
SSX2B-201ENST00000288839 IL17REQ8NFR9 667 aa9.05□□□□□ -0.96
SSX2B-201ENST00000288839 SPON1Q9HCB6 807 aa9.05□□□□□ -0.96
SSX2B-201ENST00000288839 CCNL1Q9UK58 526 aaPredicted RBP9.05□□□□□ -0.96
SSX2B-201ENST00000288839 QSER1Q2KHR3 1735 aa9.05□□□□□ -0.96
SSX2B-201ENST00000288839 GALR2O43603 387 aaPredicted RBP9.04□□□□□ -0.96
SSX2B-201ENST00000288839 NFE2L2Q16236 605 aa9.04□□□□□ -0.96
SSX2B-201ENST00000288839 DIEXFQ68CQ4 756 aaKnown RBP9.04□□□□□ -0.96
SSX2B-201ENST00000288839 MCM10Q7L590 875 aa9.04□□□□□ -0.96
SSX2B-201ENST00000288839 IFNLR1Q8IU57 520 aaPredicted RBP9.04□□□□□ -0.96
SSX2B-201ENST00000288839 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
SSX2B-201ENST00000288839 PNNQ9H307 717 aaKnown RBP9.04□□□□□ -0.96
SSX2B-201ENST00000288839 SLC52A2Q9HAB3 445 aa9.04□□□□□ -0.96
SSX2B-201ENST00000288839 ATG3Q9NT62 314 aa9.04□□□□□ -0.96
SSX2B-201ENST00000288839 PPP1R1BQ9UD71 204 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms