RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 C5P01031 1676 aa27.39■■□□□ 1.98
RAB28-201ENST00000288723 ITPK1Q13572 414 aa27.39■■□□□ 1.97
RAB28-201ENST00000288723 MTFR1LQ9H019 292 aa27.38■■□□□ 1.97
RAB28-201ENST00000288723 LINC00116Q8NCU8 138 aa27.37■■□□□ 1.97
RAB28-201ENST00000288723 SLC4A9Q96Q91 983 aa27.37■■□□□ 1.97
RAB28-201ENST00000288723 PPP1R1BQ9UD71 204 aaPredicted RBP27.37■■□□□ 1.97
RAB28-201ENST00000288723 SCN11AQ9UI33 1791 aa27.37■■□□□ 1.97
RAB28-201ENST00000288723 TAF1LQ8IZX4 1826 aa27.37■■□□□ 1.97
RAB28-201ENST00000288723 TUBGCP6Q96RT7 1819 aa27.37■■□□□ 1.97
RAB28-201ENST00000288723 SLC52A2Q9HAB3 445 aa27.37■■□□□ 1.97
RAB28-201ENST00000288723 PTGER2P43116 358 aa27.36■■□□□ 1.97
RAB28-201ENST00000288723 SMIM5Q71RC9 77 aa27.36■■□□□ 1.97
RAB28-201ENST00000288723 GAS2L2Q8NHY3 880 aa27.36■■□□□ 1.97
RAB28-201ENST00000288723 MSH5O43196 834 aa27.35■■□□□ 1.97
RAB28-201ENST00000288723 PTCD1O75127 700 aaKnown RBP27.35■■□□□ 1.97
RAB28-201ENST00000288723 FCHSD2O94868 740 aa27.34■■□□□ 1.97
RAB28-201ENST00000288723 AMIGO3Q86WK7 504 aa27.34■■□□□ 1.97
RAB28-201ENST00000288723 COL23A1Q86Y22 540 aaPredicted RBP27.34■■□□□ 1.97
RAB28-201ENST00000288723 AK7Q96M32 723 aa27.34■■□□□ 1.97
RAB28-201ENST00000288723 C4BP0C0L5 1744 aa27.33■■□□□ 1.97
RAB28-201ENST00000288723 MAP3K5Q99683 1374 aa27.33■■□□□ 1.97
RAB28-201ENST00000288723 GNAT3A8MTJ3 354 aa27.33■■□□□ 1.97
RAB28-201ENST00000288723 QSER1Q2KHR3 1735 aa27.32■■□□□ 1.96
RAB28-201ENST00000288723 IL17REQ8NFR9 667 aa27.32■■□□□ 1.96
RAB28-201ENST00000288723 HMGB2P26583 209 aaKnown RBP27.31■■□□□ 1.96
RAB28-201ENST00000288723 SLC39A6Q13433 755 aa27.31■■□□□ 1.96
RAB28-201ENST00000288723 PHF14O94880 888 aa27.3■■□□□ 1.96
RAB28-201ENST00000288723 SGIP1Q9BQI5 828 aa27.3■■□□□ 1.96
RAB28-201ENST00000288723 SLC16A10Q8TF71 515 aa27.3■■□□□ 1.96
RAB28-201ENST00000288723 MYBBP1AQ9BQG0 1328 aaKnown RBP27.29■■□□□ 1.96
RAB28-201ENST00000288723 MRC1P22897 1456 aa27.28■■□□□ 1.96
RAB28-201ENST00000288723 VIRMAQ69YN4 1812 aaKnown RBP27.28■■□□□ 1.96
RAB28-201ENST00000288723 ADAMTS7Q9UKP4 1686 aa27.28■■□□□ 1.96
RAB28-201ENST00000288723 GNPATO15228 680 aa27.27■■□□□ 1.96
RAB28-201ENST00000288723 ZNF316A6NFI3 1004 aaPredicted RBP27.26■■□□□ 1.95
RAB28-201ENST00000288723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.25■■□□□ 1.95
RAB28-201ENST00000288723 PRKRIP1Q9H875 184 aaPredicted RBP27.25■■□□□ 1.95
RAB28-201ENST00000288723 TEFQ10587 303 aa27.25■■□□□ 1.95
RAB28-201ENST00000288723 MSL1Q68DK7 614 aa27.25■■□□□ 1.95
RAB28-201ENST00000288723 FLAD1Q8NFF5 587 aa27.25■■□□□ 1.95
RAB28-201ENST00000288723 ARXQ96QS3 562 aa27.23■■□□□ 1.95
RAB28-201ENST00000288723 UBR3Q6ZT12 1888 aa27.23■■□□□ 1.95
RAB28-201ENST00000288723 MCM10Q7L590 875 aa27.23■■□□□ 1.95
RAB28-201ENST00000288723 PLEKHF1Q96S99 279 aa27.23■■□□□ 1.95
RAB28-201ENST00000288723 ZNF831Q5JPB2 1677 aa27.21■■□□□ 1.95
RAB28-201ENST00000288723 SSFA2P28290 1259 aa27.21■■□□□ 1.95
RAB28-201ENST00000288723 DCTN1Q14203 1278 aa27.21■■□□□ 1.95
RAB28-201ENST00000288723 CEMIPQ8WUJ3 1361 aa27.21■■□□□ 1.95
RAB28-201ENST00000288723 NEFMP07197 916 aa27.2■■□□□ 1.94
RAB28-201ENST00000288723 POLD1P28340 1107 aa27.2■■□□□ 1.94
RAB28-201ENST00000288723 DNAJC10Q8IXB1 793 aa27.2■■□□□ 1.94
RAB28-201ENST00000288723 RTF1Q92541 710 aaKnown RBP27.2■■□□□ 1.94
RAB28-201ENST00000288723 FHDC1Q9C0D6 1143 aaPredicted RBP27.2■■□□□ 1.94
RAB28-201ENST00000288723 CNTNAP4Q9C0A0 1308 aa27.19■■□□□ 1.94
RAB28-201ENST00000288723 CRKLP46109 303 aaKnown RBP27.18■■□□□ 1.94
RAB28-201ENST00000288723 RC3H1Q5TC82 1133 aaKnown RBP27.18■■□□□ 1.94
RAB28-201ENST00000288723 RTCBQ9Y3I0 505 aaKnown RBP27.18■■□□□ 1.94
RAB28-201ENST00000288723 COL5A3P25940 1745 aaPredicted RBP27.18■■□□□ 1.94
RAB28-201ENST00000288723 KCPQ6ZWJ8 1503 aa27.18■■□□□ 1.94
RAB28-201ENST00000288723 TTC5Q8N0Z6 440 aa27.17■■□□□ 1.94
RAB28-201ENST00000288723 TJP1Q07157 1748 aa27.17■■□□□ 1.94
RAB28-201ENST00000288723 TRAPPC3LQ5T215 181 aa27.16■■□□□ 1.94
RAB28-201ENST00000288723 ZNF790Q6PG37 636 aa27.16■■□□□ 1.94
RAB28-201ENST00000288723 SYT17Q9BSW7 474 aa27.16■■□□□ 1.94
RAB28-201ENST00000288723 RPS6KA4O75676 772 aa27.15■■□□□ 1.94
RAB28-201ENST00000288723 KLHL34Q8N239 644 aa27.15■■□□□ 1.94
RAB28-201ENST00000288723 PNNQ9H307 717 aaKnown RBP27.15■■□□□ 1.94
RAB28-201ENST00000288723 MYH14Q7Z406 1995 aaKnown RBP27.15■■□□□ 1.94
RAB28-201ENST00000288723 MAPK8IP3Q9UPT6 1336 aa27.15■■□□□ 1.94
RAB28-201ENST00000288723 BTBD11A6QL63 1104 aa27.14■■□□□ 1.94
RAB28-201ENST00000288723 KCNQ3O43525 872 aa27.14■■□□□ 1.94
RAB28-201ENST00000288723 ZNF496Q96IT1 587 aaPredicted RBP27.14■■□□□ 1.94
RAB28-201ENST00000288723 COL24A1Q17RW2 1714 aa27.14■■□□□ 1.93
RAB28-201ENST00000288723 INTS5Q6P9B9 1019 aaKnown RBP27.13■■□□□ 1.93
RAB28-201ENST00000288723 ARHGEF1Q92888 912 aaKnown RBP27.13■■□□□ 1.93
RAB28-201ENST00000288723 SIPA1L3O60292 1781 aaPredicted RBP27.13■■□□□ 1.93
RAB28-201ENST00000288723 HTATSF1O43719 755 aaKnown RBP27.13■■□□□ 1.93
RAB28-201ENST00000288723 NFE2L2Q16236 605 aa27.13■■□□□ 1.93
RAB28-201ENST00000288723 CYP19A1P11511 503 aaPredicted RBP27.12■■□□□ 1.93
RAB28-201ENST00000288723 CCDC146Q8IYE0 955 aa27.11■■□□□ 1.93
RAB28-201ENST00000288723 VSIG10Q8N0Z9 540 aa27.11■■□□□ 1.93
RAB28-201ENST00000288723 WDR43Q15061 677 aaKnown RBP eCLIP27.1■■□□□ 1.93
RAB28-201ENST00000288723 CCDC87Q9NVE4 849 aa27.1■■□□□ 1.93
RAB28-201ENST00000288723 UBR2Q8IWV8 1755 aa27.1■■□□□ 1.93
RAB28-201ENST00000288723 CICQ96RK0 1608 aaPredicted RBP27.1■■□□□ 1.93
RAB28-201ENST00000288723 THUMPD2Q9BTF0 503 aaKnown RBP27.09■■□□□ 1.93
RAB28-201ENST00000288723 ADRA2BP18089 450 aa27.09■■□□□ 1.93
RAB28-201ENST00000288723 RFC4P35249 363 aa27.09■■□□□ 1.93
RAB28-201ENST00000288723 ADAMTS8Q9UP79 889 aa27.09■■□□□ 1.93
RAB28-201ENST00000288723 MIS18AQ9NYP9 233 aa27.08■■□□□ 1.93
RAB28-201ENST00000288723 DLG5Q8TDM6 1919 aa27.07■■□□□ 1.92
RAB28-201ENST00000288723 HEG1Q9ULI3 1381 aa27.07■■□□□ 1.92
RAB28-201ENST00000288723 FMNL2Q96PY5 1086 aa27.07■■□□□ 1.92
RAB28-201ENST00000288723 ZBTB1Q9Y2K1 713 aa27.06■■□□□ 1.92
RAB28-201ENST00000288723 TAF7Q15545 349 aaPredicted RBP27.05■■□□□ 1.92
RAB28-201ENST00000288723 SRP68Q9UHB9 627 aaKnown RBP27.05■■□□□ 1.92
RAB28-201ENST00000288723 RIPK4P57078 832 aa27.04■■□□□ 1.92
RAB28-201ENST00000288723 RRP7AQ9Y3A4 280 aaKnown RBP27.04■■□□□ 1.92
RAB28-201ENST00000288723 GYS1P13807 737 aa27.04■■□□□ 1.92
RAB28-201ENST00000288723 CCDC184Q52MB2 194 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms