RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 GPATCH8Q9UKJ3 1502 aaKnown RBP5.12□□□□□ -1.59
NCOA1-201ENST00000288599 KCNG4Q8TDN1 519 aa5.12□□□□□ -1.59
NCOA1-201ENST00000288599 SEPT8Q92599 483 aa5.12□□□□□ -1.59
NCOA1-201ENST00000288599 GRIN2AQ12879 1464 aa5.12□□□□□ -1.59
NCOA1-201ENST00000288599 PLA2R1Q13018 1463 aa5.12□□□□□ -1.59
NCOA1-201ENST00000288599 PLIN1O60240 522 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 GADD45BO75293 160 aaPredicted RBP5.11□□□□□ -1.59
NCOA1-201ENST00000288599 PYGBP11216 843 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 PDE6AP16499 860 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 RDH13Q8NBN7 331 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 NBPF3Q9H094 633 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 LUC7LQ9NQ29 371 aaKnown RBP5.11□□□□□ -1.59
NCOA1-201ENST00000288599 PDS5BQ9NTI5 1447 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 RELL1Q8IUW5 271 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 GPATCH11Q8N954 259 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 SART1O43290 800 aaKnown RBP5.11□□□□□ -1.59
NCOA1-201ENST00000288599 ARHGAP25P42331 645 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 STRN4Q9NRL3 753 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 DAPK1P53355 1430 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 APBB1IPQ7Z5R6 666 aaPredicted RBP5.11□□□□□ -1.59
NCOA1-201ENST00000288599 FAM193AP78312 1265 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 HSP90B2PQ58FF3 399 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 IFNLR1Q8IU57 520 aaPredicted RBP5.11□□□□□ -1.59
NCOA1-201ENST00000288599 DZIP1LQ8IYY4 767 aaKnown RBP5.11□□□□□ -1.59
NCOA1-201ENST00000288599 CLUAP1Q96AJ1 413 aa5.11□□□□□ -1.59
NCOA1-201ENST00000288599 BMP2KQ9NSY1 1161 aaPredicted RBP5.11□□□□□ -1.59
NCOA1-201ENST00000288599 RNF123Q5XPI4 1314 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 RABEP1Q15276 862 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 SIRT1Q96EB6 747 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 DNAJC2Q99543 621 aaKnown RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 V9GYY5 206 aaPredicted RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 MRC2Q9UBG0 1479 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 TCERG1O14776 1098 aaKnown RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 SMARCA5O60264 1052 aaPredicted RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 ECM2O94769 699 aaPredicted RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 TXLNBQ8N3L3 684 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 SREK1Q8WXA9 508 aaKnown RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 RILPL2Q969X0 211 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 CARD11Q9BXL7 1154 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 SLC7A5P2Q9GIP4 190 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 ZNF408Q9H9D4 720 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 KDM5CP41229 1560 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 KIF5AQ12840 1032 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 CFAP58Q5T655 872 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 KIAA1524Q8TCG1 905 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 ANKFY1Q9P2R3 1169 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 UHRF1BP1Q6BDS2 1440 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 RAPGEF6Q8TEU7 1601 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 DIAPH1O60610 1272 aaKnown RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 LMAN1P49257 510 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 SEMA3FQ13275 785 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 RALYLQ86SE5 291 aaKnown RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 NACA2Q9H009 215 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 C9orf78Q9NZ63 289 aaPredicted RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 NAA30Q147X3 362 aaPredicted RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 C1orf228Q6PIY5 440 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 TAX1BP1Q86VP1 789 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 MPNDQ8N594 471 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 GIMAP7Q8NHV1 300 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 RBM46Q8TBY0 533 aaKnown RBP5.1□□□□□ -1.59
NCOA1-201ENST00000288599 GOLGA1Q92805 767 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 TRERF1Q96PN7 1200 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 DMRT2Q9Y5R5 561 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 ARHGEF12Q9NZN5 1544 aa5.1□□□□□ -1.59
NCOA1-201ENST00000288599 ZPR1O75312 459 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 TTC30AQ86WT1 665 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 TERF2IPQ9NYB0 399 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 MAGI2Q86UL8 1455 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 PPP1R12BO60237 982 aaPredicted RBP5.09□□□□□ -1.59
NCOA1-201ENST00000288599 CNGA1P29973 690 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 ZNF165P49910 485 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 RALBP1Q15311 655 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 CCDC152Q4G0S7 254 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 IPO4Q8TEX9 1081 aaKnown RBP5.09□□□□□ -1.59
NCOA1-201ENST00000288599 HAUS2Q9NVX0 235 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 PNMA2Q9UL42 364 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 DAPK3O43293 454 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 KIF5CO60282 957 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 PRDM10Q9NQV6 1147 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 NUTM2FA1L443 756 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 KHDRBS2Q5VWX1 349 aaKnown RBP5.09□□□□□ -1.59
NCOA1-201ENST00000288599 LARP1Q6PKG0 1096 aaKnown RBP5.09□□□□□ -1.59
NCOA1-201ENST00000288599 OPTNQ96CV9 577 aa5.09□□□□□ -1.59
NCOA1-201ENST00000288599 SRRTQ9BXP5 876 aaKnown RBP5.09□□□□□ -1.59
NCOA1-201ENST00000288599 TAF3Q5VWG9 929 aa5.09□□□□□ -1.6
NCOA1-201ENST00000288599 CWC15Q9P013 229 aaKnown RBP5.09□□□□□ -1.6
NCOA1-201ENST00000288599 CEP83Q9Y592 693 aa5.09□□□□□ -1.6
NCOA1-201ENST00000288599 PLB1Q6P1J6 1458 aa5.09□□□□□ -1.6
NCOA1-201ENST00000288599 SHROOM2Q13796 1616 aa5.09□□□□□ -1.6
NCOA1-201ENST00000288599 GOLGA6L10A0A0M3HER8 536 aa5.09□□□□□ -1.6
NCOA1-201ENST00000288599 NLRP6P59044 892 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 SERPINA10Q9UK55 444 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 FNDC3AQ9Y2H6 1198 aaKnown RBP5.08□□□□□ -1.6
NCOA1-201ENST00000288599 CEP57L1Q8IYX8 460 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 PIK3R5Q8WYR1 880 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 NGLY1Q96IV0 654 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 IFT140Q96RY7 1462 aa5.08□□□□□ -1.6
NCOA1-201ENST00000288599 WASHC4Q2M389 1173 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms