RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ELOAQ14241 798 aaKnown RBP3.59□□□□□ -1.84
CHD1-201ENST00000284049 C8orf34Q49A92 452 aa3.59□□□□□ -1.84
CHD1-201ENST00000284049 ALG1LQ6GMV1 187 aa3.59□□□□□ -1.84
CHD1-201ENST00000284049 CRBNQ96SW2 442 aa3.59□□□□□ -1.84
CHD1-201ENST00000284049 CXXC1Q9P0U4 656 aaPredicted RBP3.59□□□□□ -1.84
CHD1-201ENST00000284049 SEPT9Q9UHD8 586 aaPredicted RBP3.59□□□□□ -1.84
CHD1-201ENST00000284049 MPSTP25325 297 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 HDLBPQ00341 1268 aaKnown RBP3.58□□□□□ -1.84
CHD1-201ENST00000284049 PUS10Q3MIT2 529 aaKnown RBP3.58□□□□□ -1.84
CHD1-201ENST00000284049 KCNB2Q92953 911 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 DCBLD2Q96PD2 775 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 ZC3H4Q9UPT8 1303 aaKnown RBP3.58□□□□□ -1.84
CHD1-201ENST00000284049 TNNI2P48788 182 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 PLEKHM2Q8IWE5 1019 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 ANAPC16Q96DE5 110 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 PCGF6Q9BYE7 350 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 ADAM33Q9BZ11 813 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 ACBD3Q9H3P7 528 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 CHPF2Q9P2E5 772 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 ZNF654Q8IZM8 581 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 CRELD1Q96HD1 420 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 PLCD4Q9BRC7 762 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 DMGDHQ9UI17 866 aaKnown RBP3.58□□□□□ -1.84
CHD1-201ENST00000284049 PCDHGC3Q9UN70 934 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 PPP4R3BQ5MIZ7 849 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 SWT1Q5T5J6 900 aaKnown RBP3.58□□□□□ -1.84
CHD1-201ENST00000284049 TRIM63Q969Q1 353 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 TGIF2Q9GZN2 237 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 PDS5BQ9NTI5 1447 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 FAM174AQ8TBP5 190 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 ADAM32Q8TC27 787 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 NBPF3Q9H094 633 aa3.58□□□□□ -1.84
CHD1-201ENST00000284049 METTL5Q9NRN9 209 aaKnown RBP3.58□□□□□ -1.84
CHD1-201ENST00000284049 PPP1R3GB7ZBB8 358 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 NUDT7P0C024 238 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 CCDC24Q8N4L8 307 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.57□□□□□ -1.84
CHD1-201ENST00000284049 MRPL42Q9Y6G3 142 aaKnown RBP3.57□□□□□ -1.84
CHD1-201ENST00000284049 GOLGA8CPA6NN73 597 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 SFI1A8K8P3 1242 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 GNA15P30679 374 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 SETQ01105 290 aaPredicted RBP3.57□□□□□ -1.84
CHD1-201ENST00000284049 TRERF1Q96PN7 1200 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 SPOCK3Q9BQ16 436 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 SPON2Q9BUD6 331 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 RBCK1Q9BYM8 510 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 CEP126Q9P2H0 1117 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 SHROOM2Q13796 1616 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 BACH1O14867 736 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 CFHP08603 1231 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 CHRDL2Q6WN34 429 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 GABBR1Q9UBS5 961 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 PSDA5PKW4 1024 aaPredicted RBP3.57□□□□□ -1.84
CHD1-201ENST00000284049 CCDC146Q8IYE0 955 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 JDP2Q8WYK2 163 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 PPP4R2Q9NY27 417 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 PCDHGA4Q9Y5G9 962 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 CENPBP07199 599 aaPredicted RBP3.57□□□□□ -1.84
CHD1-201ENST00000284049 EIF1AXP47813 144 aaKnown RBP3.57□□□□□ -1.84
CHD1-201ENST00000284049 FAM50AQ14320 339 aaKnown RBP3.57□□□□□ -1.84
CHD1-201ENST00000284049 NOM1Q5C9Z4 860 aaKnown RBP3.57□□□□□ -1.84
CHD1-201ENST00000284049 ODR4Q5SWX8 454 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 DMRTB1Q96MA1 342 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 STAC3Q96MF2 364 aa3.57□□□□□ -1.84
CHD1-201ENST00000284049 MRC2Q9UBG0 1479 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 MCCD1P59942 119 aaPredicted RBP3.56□□□□□ -1.84
CHD1-201ENST00000284049 RALBP1Q15311 655 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 IFT57Q9NWB7 429 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 CUEDC1Q9NWM3 386 aaPredicted RBP3.56□□□□□ -1.84
CHD1-201ENST00000284049 CFAP99D6REC4 459 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 USP5P45974 858 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 PDCD7Q8N8D1 485 aaKnown RBP3.56□□□□□ -1.84
CHD1-201ENST00000284049 TMX1Q9H3N1 280 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 PCDHB11Q9Y5F2 797 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 PRR14Q9BWN1 585 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 FAN1Q9Y2M0 1017 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 PNMA6FA0A0J9YX94 578 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 WDHD1O75717 1129 aaPredicted RBP3.56□□□□□ -1.84
CHD1-201ENST00000284049 HDAC1Q13547 482 aaPredicted RBP3.56□□□□□ -1.84
CHD1-201ENST00000284049 TMC7Q7Z402 723 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 FBXO33Q7Z6M2 555 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 ABTB2Q8N961 1025 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 MRVI1Q9Y6F6 885 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 SCG3Q8WXD2 468 aaKnown RBP3.56□□□□□ -1.84
CHD1-201ENST00000284049 CITED4Q96RK1 184 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 ZNF232Q9UNY5 417 aa3.56□□□□□ -1.84
CHD1-201ENST00000284049 HAX1O00165 279 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 L1TD1Q5T7N2 865 aaKnown RBP3.55□□□□□ -1.84
CHD1-201ENST00000284049 IER5LQ5T953 404 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 TSEN2Q8NCE0 465 aaKnown RBP3.55□□□□□ -1.84
CHD1-201ENST00000284049 DNMT3AQ9Y6K1 912 aaPredicted RBP3.55□□□□□ -1.84
CHD1-201ENST00000284049 NEFMP07197 916 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 CDC45O75419 566 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 HSD3B2P26439 372 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 EHHADHQ08426 723 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 FBXO31Q5XUX0 539 aaPredicted RBP3.55□□□□□ -1.84
CHD1-201ENST00000284049 C16orf46Q6P387 395 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 TRIM52Q96A61 297 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 TOPBP1Q92547 1522 aa3.55□□□□□ -1.84
CHD1-201ENST00000284049 SLC34A2O95436 690 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms