RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 CEMIPQ8WUJ3 1361 aa13.94□□□□□ -0.18
GGPS1-201ENST00000282841 PHKG2P15735 406 aa13.94□□□□□ -0.18
GGPS1-201ENST00000282841 WDR17Q8IZU2 1322 aa13.94□□□□□ -0.18
GGPS1-201ENST00000282841 HDGFL1Q5TGJ6 251 aa13.93□□□□□ -0.18
GGPS1-201ENST00000282841 DDX19BQ9UMR2 479 aa13.93□□□□□ -0.18
GGPS1-201ENST00000282841 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
GGPS1-201ENST00000282841 EIF4A1P60842 406 aaKnown RBP13.93□□□□□ -0.18
GGPS1-201ENST00000282841 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
GGPS1-201ENST00000282841 AEBP2Q6ZN18 517 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-201ENST00000282841 ZBTB40Q9NUA8 1239 aa13.92□□□□□ -0.18
GGPS1-201ENST00000282841 SPG7Q9UQ90 795 aa13.92□□□□□ -0.18
GGPS1-201ENST00000282841 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-201ENST00000282841 FKBP5Q13451 457 aaPredicted RBP13.92□□□□□ -0.18
GGPS1-201ENST00000282841 STK31Q9BXU1 1019 aa13.92□□□□□ -0.18
GGPS1-201ENST00000282841 CHPF2Q9P2E5 772 aa13.92□□□□□ -0.18
GGPS1-201ENST00000282841 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
GGPS1-201ENST00000282841 IFNL2Q8IZJ0 200 aa13.91□□□□□ -0.18
GGPS1-201ENST00000282841 MS4A1P11836 297 aa13.9□□□□□ -0.18
GGPS1-201ENST00000282841 PROSER3Q2NL68 480 aa13.9□□□□□ -0.18
GGPS1-201ENST00000282841 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
GGPS1-201ENST00000282841 KDM6AO15550 1401 aaPredicted RBP13.9□□□□□ -0.18
GGPS1-201ENST00000282841 NCAPD2Q15021 1401 aa13.9□□□□□ -0.18
GGPS1-201ENST00000282841 ABCC4O15439 1325 aa13.89□□□□□ -0.19
GGPS1-201ENST00000282841 BRPF1P55201 1214 aaPredicted RBP13.89□□□□□ -0.19
GGPS1-201ENST00000282841 FLIIQ13045 1269 aa13.89□□□□□ -0.19
GGPS1-201ENST00000282841 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
GGPS1-201ENST00000282841 ZCRB1Q8TBF4 217 aaKnown RBP13.89□□□□□ -0.19
GGPS1-201ENST00000282841 API5Q9BZZ5 524 aaKnown RBP13.89□□□□□ -0.19
GGPS1-201ENST00000282841 NHSL1Q5SYE7 1610 aa13.89□□□□□ -0.19
GGPS1-201ENST00000282841 FAM208AQ9UK61 1670 aaKnown RBP13.89□□□□□ -0.19
GGPS1-201ENST00000282841 A0A0G2JS52 829 aa13.89□□□□□ -0.19
GGPS1-201ENST00000282841 MEIS3Q99687 375 aa13.89□□□□□ -0.19
GGPS1-201ENST00000282841 SLC52A2Q9HAB3 445 aa13.89□□□□□ -0.19
GGPS1-201ENST00000282841 TOM1O60784 492 aa13.88□□□□□ -0.19
GGPS1-201ENST00000282841 IL2RBP14784 551 aa13.88□□□□□ -0.19
GGPS1-201ENST00000282841 ARHGAP45Q92619 1136 aa13.88□□□□□ -0.19
GGPS1-201ENST00000282841 RGS12O14924 1447 aa13.88□□□□□ -0.19
GGPS1-201ENST00000282841 APBB1O00213 710 aa13.88□□□□□ -0.19
GGPS1-201ENST00000282841 AIMP1Q12904 312 aaKnown RBP13.88□□□□□ -0.19
GGPS1-201ENST00000282841 PDZRN3Q9UPQ7 1066 aa13.88□□□□□ -0.19
GGPS1-201ENST00000282841 LRRC37A3O60309 1634 aa13.87□□□□□ -0.19
GGPS1-201ENST00000282841 NPM2Q86SE8 214 aaKnown RBP13.87□□□□□ -0.19
GGPS1-201ENST00000282841 ZNF496Q96IT1 587 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-201ENST00000282841 MYL6BP14649 208 aa13.87□□□□□ -0.19
GGPS1-201ENST00000282841 CABP4P57796 275 aa13.87□□□□□ -0.19
GGPS1-201ENST00000282841 ZNF790Q6PG37 636 aa13.87□□□□□ -0.19
GGPS1-201ENST00000282841 SIRT2Q8IXJ6 389 aa13.87□□□□□ -0.19
GGPS1-201ENST00000282841 CARD10Q9BWT7 1032 aa13.87□□□□□ -0.19
GGPS1-201ENST00000282841 RWDD1Q9H446 243 aaPredicted RBP13.87□□□□□ -0.19
GGPS1-201ENST00000282841 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
GGPS1-201ENST00000282841 PTCD1O75127 700 aaKnown RBP13.86□□□□□ -0.19
GGPS1-201ENST00000282841 GIGYF1O75420 1035 aaPredicted RBP13.86□□□□□ -0.19
GGPS1-201ENST00000282841 ABCA3Q99758 1704 aa13.86□□□□□ -0.19
GGPS1-201ENST00000282841 LMO7Q8WWI1 1683 aa13.86□□□□□ -0.19
GGPS1-201ENST00000282841 PDE4AP27815 886 aa13.85□□□□□ -0.19
GGPS1-201ENST00000282841 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
GGPS1-201ENST00000282841 VIRMAQ69YN4 1812 aaKnown RBP13.85□□□□□ -0.19
GGPS1-201ENST00000282841 DCAF5Q96JK2 942 aa13.85□□□□□ -0.19
GGPS1-201ENST00000282841 EP400Q96L91 3159 aa13.84□□□□□ -0.19
GGPS1-201ENST00000282841 PI4KAP2A4QPH2 592 aa13.84□□□□□ -0.19
GGPS1-201ENST00000282841 PI4KAP1Q8N8J0 262 aa13.84□□□□□ -0.19
GGPS1-201ENST00000282841 SYTL4Q96C24 671 aaPredicted RBP13.84□□□□□ -0.19
GGPS1-201ENST00000282841 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
GGPS1-201ENST00000282841 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.2
GGPS1-201ENST00000282841 INTS3Q68E01 1043 aaKnown RBP13.83□□□□□ -0.2
GGPS1-201ENST00000282841 TTC5Q8N0Z6 440 aa13.83□□□□□ -0.2
GGPS1-201ENST00000282841 C8orf37Q96NL8 207 aa13.83□□□□□ -0.2
GGPS1-201ENST00000282841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.21e-6■□□□□ 8.4
GGPS1-201ENST00000282841 PTPRCP08575 1304 aa13.83□□□□□ -0.2
GGPS1-201ENST00000282841 PCDH11XQ9BZA7 1347 aa13.81□□□□□ -0.2
GGPS1-201ENST00000282841 PCDH11YQ9BZA8 1340 aa13.81□□□□□ -0.2
GGPS1-201ENST00000282841 PHLPP1O60346 1717 aa13.81□□□□□ -0.2
GGPS1-201ENST00000282841 ANKRD45Q5TZF3 282 aa13.81□□□□□ -0.2
GGPS1-201ENST00000282841 BABAM1Q9NWV8 329 aa13.81□□□□□ -0.2
GGPS1-201ENST00000282841 HDAC1Q13547 482 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-201ENST00000282841 JARID2Q92833 1246 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-201ENST00000282841 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
GGPS1-201ENST00000282841 CWF19L2Q2TBE0 894 aaKnown RBP13.79□□□□□ -0.2
GGPS1-201ENST00000282841 ASAP1Q9ULH1 1129 aa13.79□□□□□ -0.2
GGPS1-201ENST00000282841 KDM3BQ7LBC6 1761 aa13.79□□□□□ -0.2
GGPS1-201ENST00000282841 PDIA6Q15084 440 aa13.79□□□□□ -0.2
GGPS1-201ENST00000282841 BACH2Q9BYV9 841 aa13.79□□□□□ -0.2
GGPS1-201ENST00000282841 DBF4Q9UBU7 674 aaPredicted RBP13.79□□□□□ -0.2
GGPS1-201ENST00000282841 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
GGPS1-201ENST00000282841 SMARCA5O60264 1052 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-201ENST00000282841 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
GGPS1-201ENST00000282841 NGLY1Q96IV0 654 aa13.78□□□□□ -0.2
GGPS1-201ENST00000282841 AHDC1Q5TGY3 1603 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-201ENST00000282841 COL16A1Q07092 1604 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-201ENST00000282841 NBPF7P0C2Y1 421 aaPredicted RBP13.77□□□□□ -0.2
GGPS1-201ENST00000282841 CEP85Q6P2H3 762 aa13.77□□□□□ -0.2
GGPS1-201ENST00000282841 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.2
GGPS1-201ENST00000282841 LRRFIP2Q9Y608 721 aaKnown RBP13.77□□□□□ -0.2
GGPS1-201ENST00000282841 SCN11AQ9UI33 1791 aa13.77□□□□□ -0.2
GGPS1-201ENST00000282841 A1BGP04217 495 aa13.77□□□□□ -0.21
GGPS1-201ENST00000282841 HSP90AB1P08238 724 aaKnown RBP13.77□□□□□ -0.21
GGPS1-201ENST00000282841 AAMPQ13685 434 aa13.77□□□□□ -0.21
GGPS1-201ENST00000282841 FAM182BQ5T319 152 aa13.77□□□□□ -0.21
GGPS1-201ENST00000282841 USP44Q9H0E7 712 aa13.77□□□□□ -0.21
GGPS1-201ENST00000282841 CCT4P50991 539 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8731 ms