RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 MTHFSDQ2M296 383 aaKnown RBP9.6□□□□□ -0.87
EPHA4-201ENST00000281821 BCL11AQ9H165 835 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 PPLO60437 1756 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 LRRC7Q96NW7 1537 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 GCC1Q96CN9 775 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 UBR1Q8IWV7 1749 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 RFC4P35249 363 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 NBPF6Q5VWK0 638 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 KRT27Q7Z3Y8 459 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 NBPF4Q96M43 638 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 SLC52A2Q9HAB3 445 aa9.6□□□□□ -0.87
EPHA4-201ENST00000281821 CLASRPQ8N2M8 674 aaKnown RBP9.59□□□□□ -0.87
EPHA4-201ENST00000281821 IL27Q8NEV9 243 aa9.59□□□□□ -0.87
EPHA4-201ENST00000281821 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
EPHA4-201ENST00000281821 MCM10Q7L590 875 aa9.59□□□□□ -0.87
EPHA4-201ENST00000281821 DNAAF4Q8WXU2 420 aa9.59□□□□□ -0.87
EPHA4-201ENST00000281821 AFF2P51816 1311 aa9.59□□□□□ -0.87
EPHA4-201ENST00000281821 TCERG1O14776 1098 aaKnown RBP9.59□□□□□ -0.87
EPHA4-201ENST00000281821 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
EPHA4-201ENST00000281821 ZRANB1Q9UGI0 708 aa9.59□□□□□ -0.87
EPHA4-201ENST00000281821 IGHMBP2P38935 993 aaKnown RBP9.59□□□□□ -0.87
EPHA4-201ENST00000281821 VPS37DQ86XT2 251 aa9.59□□□□□ -0.87
EPHA4-201ENST00000281821 IFIT2P09913 472 aaKnown RBP9.59□□□□□ -0.88
EPHA4-201ENST00000281821 AIMP1Q12904 312 aaKnown RBP9.59□□□□□ -0.88
EPHA4-201ENST00000281821 DDX21Q9NR30 783 aaKnown RBP eCLIP9.59□□□□□ -0.88
EPHA4-201ENST00000281821 FANCIQ9NVI1 1328 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 HIP1O00291 1037 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 PHKG2P15735 406 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 CLUAP1Q96AJ1 413 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 CDC5LQ99459 802 aaKnown RBP9.58□□□□□ -0.88
EPHA4-201ENST00000281821 KIF1AQ12756 1690 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 ATP6V1AP38606 617 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 CCDC57Q2TAC2 916 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 ST5P78524 1137 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 FAM98CQ17RN3 349 aaKnown RBP9.58□□□□□ -0.88
EPHA4-201ENST00000281821 CCNL1Q9UK58 526 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-201ENST00000281821 AKAP2Q9Y2D5 859 aa9.58□□□□□ -0.88
EPHA4-201ENST00000281821 CHL1O00533 1208 aa9.57□□□□□ -0.88
EPHA4-201ENST00000281821 TPTE2Q6XPS3 522 aa9.57□□□□□ -0.88
EPHA4-201ENST00000281821 ZNF142P52746 1687 aaPredicted RBP9.57□□□□□ -0.88
EPHA4-201ENST00000281821 ZNF790Q6PG37 636 aa9.57□□□□□ -0.88
EPHA4-201ENST00000281821 MPHOSPH8Q99549 860 aa9.57□□□□□ -0.88
EPHA4-201ENST00000281821 PNPLA6Q8IY17 1366 aa9.57□□□□□ -0.88
EPHA4-201ENST00000281821 ADRA2BP18089 450 aa9.57□□□□□ -0.88
EPHA4-201ENST00000281821 LINS1Q8NG48 757 aa9.57□□□□□ -0.88
EPHA4-201ENST00000281821 GJD4Q96KN9 370 aaPredicted RBP9.57□□□□□ -0.88
EPHA4-201ENST00000281821 ADGRB2O60241 1585 aa9.56□□□□□ -0.88
EPHA4-201ENST00000281821 FLIIQ13045 1269 aa9.56□□□□□ -0.88
EPHA4-201ENST00000281821 HSPA1LP34931 641 aa9.56□□□□□ -0.88
EPHA4-201ENST00000281821 CEP126Q9P2H0 1117 aa9.56□□□□□ -0.88
EPHA4-201ENST00000281821 KSR2Q6VAB6 950 aa9.56□□□□□ -0.88
EPHA4-201ENST00000281821 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
EPHA4-201ENST00000281821 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
EPHA4-201ENST00000281821 ZSCAN25Q6NSZ9 544 aa9.56□□□□□ -0.88
EPHA4-201ENST00000281821 CWC25Q9NXE8 425 aaPredicted RBP9.56□□□□□ -0.88
EPHA4-201ENST00000281821 RAB11FIP3O75154 756 aa9.55□□□□□ -0.88
EPHA4-201ENST00000281821 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
EPHA4-201ENST00000281821 MBIPQ9NS73 344 aa9.55□□□□□ -0.88
EPHA4-201ENST00000281821 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
EPHA4-201ENST00000281821 TBC1D2BQ9UPU7 963 aa9.55□□□□□ -0.88
EPHA4-201ENST00000281821 SEPT12Q8IYM1 358 aa9.55□□□□□ -0.88
EPHA4-201ENST00000281821 SLC27A3Q5K4L6 730 aa9.55□□□□□ -0.88
EPHA4-201ENST00000281821 NLGN1Q8N2Q7 840 aa9.55□□□□□ -0.88
EPHA4-201ENST00000281821 FGD1P98174 961 aa9.54□□□□□ -0.88
EPHA4-201ENST00000281821 KIF3AQ9Y496 699 aa9.54□□□□□ -0.88
EPHA4-201ENST00000281821 QRICH2Q9H0J4 1663 aa9.54□□□□□ -0.88
EPHA4-201ENST00000281821 MVPQ14764 893 aaKnown RBP9.54□□□□□ -0.88
EPHA4-201ENST00000281821 SETDB2Q96T68 719 aa9.54□□□□□ -0.88
EPHA4-201ENST00000281821 TSR2Q969E8 191 aaKnown RBP9.54□□□□□ -0.88
EPHA4-201ENST00000281821 TMC4Q7Z404 712 aa9.54□□□□□ -0.88
EPHA4-201ENST00000281821 NFATC2IPQ8NCF5 419 aa9.54□□□□□ -0.88
EPHA4-201ENST00000281821 COG6Q9Y2V7 657 aa9.54□□□□□ -0.88
EPHA4-201ENST00000281821 RARSP54136 660 aaKnown RBP9.53□□□□□ -0.88
EPHA4-201ENST00000281821 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 TFCP2L1Q9NZI6 479 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 SLF2Q8IX21 1173 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 PPP1R1BQ9UD71 204 aaPredicted RBP9.53□□□□□ -0.88
EPHA4-201ENST00000281821 TRMT112Q9UI30 125 aaKnown RBP9.53□□□□□ -0.88
EPHA4-201ENST00000281821 NLRP3Q96P20 1036 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 BCL2L13Q9BXK5 485 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 FAM83GA6ND36 823 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 REC8O95072 547 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
EPHA4-201ENST00000281821 CNNM1Q9NRU3 951 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 RNF123Q5XPI4 1314 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 RGL2O15211 777 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 IFIT1P09914 478 aaKnown RBP9.53□□□□□ -0.88
EPHA4-201ENST00000281821 CCDC152Q4G0S7 254 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 SSH2Q76I76 1423 aa9.53□□□□□ -0.88
EPHA4-201ENST00000281821 DDX46Q7L014 1031 aaKnown RBP9.53□□□□□ -0.88
EPHA4-201ENST00000281821 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.52□□□□□ -0.89
EPHA4-201ENST00000281821 ANKRD18BA2A2Z9 1011 aa9.52□□□□□ -0.89
EPHA4-201ENST00000281821 IFIT5Q13325 482 aaKnown RBP9.52□□□□□ -0.89
EPHA4-201ENST00000281821 NBPF5PQ86XG9 351 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-201ENST00000281821 MYL6BP14649 208 aa9.52□□□□□ -0.89
EPHA4-201ENST00000281821 IL6STP40189 918 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-201ENST00000281821 NECTIN2Q92692 538 aa9.52□□□□□ -0.89
EPHA4-201ENST00000281821 DDX17Q92841 729 aaKnown RBP9.52□□□□□ -0.89
EPHA4-201ENST00000281821 SOGA3Q5TF21 947 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms