RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 SRGAP3O43295 1099 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 ALS2CR12Q96Q35 445 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 RAI14Q9P0K7 980 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 USP25Q9UHP3 1055 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 GIGYF2Q6Y7W6 1299 aaKnown RBP15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 CCDC175P0C221 793 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 PLEKHO1Q53GL0 409 aaPredicted RBP15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 RPAP2Q8IXW5 612 aaPredicted RBP15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 CNNM1Q9NRU3 951 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 DDX19AQ9NUU7 478 aaKnown RBP15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 ATF3P18847 181 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 CCDC150Q8NCX0 1101 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 NUP88Q99567 741 aaPredicted RBP15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 RAB11FIP3O75154 756 aa15.85■□□□□ 0.13
NOTCH1-201ENST00000277541 MX1P20591 662 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 LMAN1P49257 510 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 NUP133Q8WUM0 1156 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 UBAC1Q9BSL1 405 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 SIL1Q9H173 461 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 KLHL40Q2TBA0 621 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 TMEM57Q8N5G2 664 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 ZHX3Q9H4I2 956 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 NAA15Q9BXJ9 866 aaKnown RBP15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 PHAXQ9H814 394 aaKnown RBP15.84■□□□□ 0.13
NOTCH1-201ENST00000277541 SOGA3Q5TF21 947 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 SPECC1LQ69YQ0 1117 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 CCDC113Q9H0I3 377 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 EHBP1Q8NDI1 1231 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 SPDYE4A6NLX3 237 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 GTPBP4Q9BZE4 634 aaKnown RBP15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 FGFR1OPO95684 399 aaKnown RBP15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 MNAT1P51948 309 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 GTF2A1P52655 376 aaPredicted RBP15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 ZSCAN23Q3MJ62 389 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 USO1O60763 962 aaKnown RBP15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 PCF11O94913 1555 aaKnown RBP15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 UBE2HP62256 183 aa15.83■□□□□ 0.12
NOTCH1-201ENST00000277541 SSFA2P28290 1259 aa15.82■□□□□ 0.12
NOTCH1-201ENST00000277541 CETN2P41208 172 aa15.82■□□□□ 0.12
NOTCH1-201ENST00000277541 NF2P35240 595 aa15.82■□□□□ 0.12
NOTCH1-201ENST00000277541 HMGB1P09429 215 aaKnown RBP15.82■□□□□ 0.12
NOTCH1-201ENST00000277541 ALDH1L2Q3SY69 923 aa15.82■□□□□ 0.12
NOTCH1-201ENST00000277541 TAOK3Q9H2K8 898 aa15.82■□□□□ 0.12
NOTCH1-201ENST00000277541 YEATS4O95619 227 aa15.82■□□□□ 0.12
NOTCH1-201ENST00000277541 CUL7Q14999 1698 aa15.82■□□□□ 0.12
NOTCH1-201ENST00000277541 POTEJP0CG39 1038 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 SPATA24Q86W54 205 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 IPO4Q8TEX9 1081 aaKnown RBP15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 DNAAF4Q8WXU2 420 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 PAFAH1B1P43034 410 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 GOPCQ9HD26 462 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 NLRP6P59044 892 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 FKBP4Q02790 459 aaKnown RBP eCLIP15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 ABTB2Q8N961 1025 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 IGF1RP08069 1367 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 STAMBPO95630 424 aa15.81■□□□□ 0.12
NOTCH1-201ENST00000277541 LIMCH1Q9UPQ0 1083 aa15.8■□□□□ 0.12
NOTCH1-201ENST00000277541 TRMT1Q9NXH9 659 aaKnown RBP15.8■□□□□ 0.12
NOTCH1-201ENST00000277541 ABCC11Q96J66 1382 aa15.8■□□□□ 0.12
NOTCH1-201ENST00000277541 CCDC94Q9BW85 323 aaPredicted RBP15.8■□□□□ 0.12
NOTCH1-201ENST00000277541 TDO2P48775 406 aa15.8■□□□□ 0.12
NOTCH1-201ENST00000277541 DAPK1P53355 1430 aa15.8■□□□□ 0.12
NOTCH1-201ENST00000277541 CEP63Q96MT8 703 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 TSG101Q99816 390 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 NSD3Q9BZ95 1437 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 GLRX3O76003 335 aaKnown RBP15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 CKAP2LQ8IYA6 745 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 TRERF1Q96PN7 1200 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 ARFGAP3Q9NP61 516 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 HS1BP3Q53T59 392 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 LRSAM1Q6UWE0 723 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 TMC6Q7Z403 805 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 KIF1BPQ96EK5 621 aa15.79■□□□□ 0.12
NOTCH1-201ENST00000277541 FCHSD2O94868 740 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 MEX3CQ5U5Q3 659 aaKnown RBP15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 TMEM132EQ6IEE7 984 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 CACNA2D4Q7Z3S7 1137 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 BAG4O95429 457 aaKnown RBP15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 TBC1D32Q96NH3 1257 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 C8orf76Q96K31 380 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 KIF14Q15058 1648 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 CEP112Q8N8E3 955 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 KLHL10Q6JEL2 608 aa15.78■□□□□ 0.12
NOTCH1-201ENST00000277541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.78■□□□□ 0.122e-6■■■■■ 40.6
NOTCH1-201ENST00000277541 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
NOTCH1-201ENST00000277541 BCCIPQ9P287 314 aaKnown RBP eCLIP15.77■□□□□ 0.12
NOTCH1-201ENST00000277541 PAF1Q8N7H5 531 aa15.77■□□□□ 0.12
NOTCH1-201ENST00000277541 HSPA4P34932 840 aa15.77■□□□□ 0.12
NOTCH1-201ENST00000277541 ITSN2Q9NZM3 1697 aa15.77■□□□□ 0.12
NOTCH1-201ENST00000277541 STX6O43752 255 aa15.77■□□□□ 0.12
NOTCH1-201ENST00000277541 BBXQ8WY36 941 aaPredicted RBP15.77■□□□□ 0.11
NOTCH1-201ENST00000277541 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
NOTCH1-201ENST00000277541 GSTTP1A0A1W2PQM5 241 aa15.77■□□□□ 0.11
NOTCH1-201ENST00000277541 PRPF40BQ6NWY9 871 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms