RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 MRC1P22897 1456 aa18.21■□□□□ 0.51
CT55-201ENST00000276241 RBM42Q9BTD8 480 aaKnown RBP18.2■□□□□ 0.5
CT55-201ENST00000276241 VIRMAQ69YN4 1812 aaKnown RBP18.2■□□□□ 0.5
CT55-201ENST00000276241 MAP3K5Q99683 1374 aa18.19■□□□□ 0.5
CT55-201ENST00000276241 SRCAPQ6ZRS2 3230 aa18.19■□□□□ 0.5
CT55-201ENST00000276241 ADAMTS7Q9UKP4 1686 aa18.19■□□□□ 0.5
CT55-201ENST00000276241 RALBP1Q15311 655 aa18.19■□□□□ 0.5
CT55-201ENST00000276241 NFATC2IPQ8NCF5 419 aa18.19■□□□□ 0.5
CT55-201ENST00000276241 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
CT55-201ENST00000276241 RNMTO43148 476 aaKnown RBP18.18■□□□□ 0.5
CT55-201ENST00000276241 MSH5O43196 834 aa18.18■□□□□ 0.5
CT55-201ENST00000276241 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
CT55-201ENST00000276241 GAS2L2Q8NHY3 880 aa18.18■□□□□ 0.5
CT55-201ENST00000276241 AK7Q96M32 723 aa18.18■□□□□ 0.5
CT55-201ENST00000276241 MTFR1LQ9H019 292 aa18.18■□□□□ 0.5
CT55-201ENST00000276241 LINC00116Q8NCU8 138 aa18.17■□□□□ 0.5
CT55-201ENST00000276241 ITPK1Q13572 414 aa18.16■□□□□ 0.5
CT55-201ENST00000276241 PHACTR3Q96KR7 559 aa18.16■□□□□ 0.5
CT55-201ENST00000276241 SLC52A2Q9HAB3 445 aa18.16■□□□□ 0.5
CT55-201ENST00000276241 MYBBP1AQ9BQG0 1328 aaKnown RBP18.16■□□□□ 0.5
CT55-201ENST00000276241 PHF14O94880 888 aa18.15■□□□□ 0.5
CT55-201ENST00000276241 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
CT55-201ENST00000276241 PTCD1O75127 700 aaKnown RBP18.15■□□□□ 0.5
CT55-201ENST00000276241 ZNF831Q5JPB2 1677 aa18.14■□□□□ 0.5
CT55-201ENST00000276241 COL5A3P25940 1745 aaPredicted RBP18.14■□□□□ 0.49
CT55-201ENST00000276241 FCHSD2O94868 740 aa18.14■□□□□ 0.49
CT55-201ENST00000276241 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
CT55-201ENST00000276241 PTGER2P43116 358 aa18.14■□□□□ 0.49
CT55-201ENST00000276241 COL23A1Q86Y22 540 aaPredicted RBP18.14■□□□□ 0.49
CT55-201ENST00000276241 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.49
CT55-201ENST00000276241 TJP1Q07157 1748 aa18.13■□□□□ 0.49
CT55-201ENST00000276241 UBR3Q6ZT12 1888 aa18.13■□□□□ 0.49
CT55-201ENST00000276241 GNPATO15228 680 aa18.13■□□□□ 0.49
CT55-201ENST00000276241 SMIM5Q71RC9 77 aa18.13■□□□□ 0.49
CT55-201ENST00000276241 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
CT55-201ENST00000276241 AMIGO3Q86WK7 504 aa18.12■□□□□ 0.49
CT55-201ENST00000276241 KCPQ6ZWJ8 1503 aa18.11■□□□□ 0.49
CT55-201ENST00000276241 TEFQ10587 303 aa18.11■□□□□ 0.49
CT55-201ENST00000276241 MSL1Q68DK7 614 aa18.11■□□□□ 0.49
CT55-201ENST00000276241 SLC16A10Q8TF71 515 aa18.11■□□□□ 0.49
CT55-201ENST00000276241 CICQ96RK0 1608 aaPredicted RBP18.11■□□□□ 0.49
CT55-201ENST00000276241 NEFMP07197 916 aa18.1■□□□□ 0.49
CT55-201ENST00000276241 SGIP1Q9BQI5 828 aa18.1■□□□□ 0.49
CT55-201ENST00000276241 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
CT55-201ENST00000276241 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.09■□□□□ 0.49
CT55-201ENST00000276241 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
CT55-201ENST00000276241 IL17REQ8NFR9 667 aa18.09■□□□□ 0.49
CT55-201ENST00000276241 PRKRIP1Q9H875 184 aaPredicted RBP18.09■□□□□ 0.49
CT55-201ENST00000276241 POLD1P28340 1107 aa18.08■□□□□ 0.49
CT55-201ENST00000276241 FLAD1Q8NFF5 587 aa18.08■□□□□ 0.49
CT55-201ENST00000276241 RTF1Q92541 710 aaKnown RBP18.08■□□□□ 0.49
CT55-201ENST00000276241 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.48
CT55-201ENST00000276241 UBR2Q8IWV8 1755 aa18.08■□□□□ 0.48
CT55-201ENST00000276241 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.48
CT55-201ENST00000276241 COL24A1Q17RW2 1714 aa18.07■□□□□ 0.48
CT55-201ENST00000276241 SSFA2P28290 1259 aa18.07■□□□□ 0.48
CT55-201ENST00000276241 MCM10Q7L590 875 aa18.07■□□□□ 0.48
CT55-201ENST00000276241 TTC5Q8N0Z6 440 aa18.07■□□□□ 0.48
CT55-201ENST00000276241 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
CT55-201ENST00000276241 ARXQ96QS3 562 aa18.07■□□□□ 0.48
CT55-201ENST00000276241 CNTNAP4Q9C0A0 1308 aa18.07■□□□□ 0.48
CT55-201ENST00000276241 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
CT55-201ENST00000276241 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
CT55-201ENST00000276241 FHDC1Q9C0D6 1143 aaPredicted RBP18.06■□□□□ 0.48
CT55-201ENST00000276241 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
CT55-201ENST00000276241 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
CT55-201ENST00000276241 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
CT55-201ENST00000276241 PNNQ9H307 717 aaKnown RBP18.04■□□□□ 0.48
CT55-201ENST00000276241 C4AP0C0L4 1744 aa18.03■□□□□ 0.48
CT55-201ENST00000276241 DLG5Q8TDM6 1919 aa18.03■□□□□ 0.48
CT55-201ENST00000276241 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
CT55-201ENST00000276241 BTBD11A6QL63 1104 aa18.02■□□□□ 0.48
CT55-201ENST00000276241 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.48
CT55-201ENST00000276241 ZNF790Q6PG37 636 aa18.02■□□□□ 0.48
CT55-201ENST00000276241 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
CT55-201ENST00000276241 TRAPPC3LQ5T215 181 aa18.01■□□□□ 0.47
CT55-201ENST00000276241 CCDC146Q8IYE0 955 aa18.01■□□□□ 0.47
CT55-201ENST00000276241 RPS6KA4O75676 772 aa18■□□□□ 0.47
CT55-201ENST00000276241 ZNF496Q96IT1 587 aaPredicted RBP18■□□□□ 0.47
CT55-201ENST00000276241 SYT17Q9BSW7 474 aa18■□□□□ 0.47
CT55-201ENST00000276241 CCDC87Q9NVE4 849 aa18■□□□□ 0.47
CT55-201ENST00000276241 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
CT55-201ENST00000276241 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
CT55-201ENST00000276241 KCNQ3O43525 872 aa17.99■□□□□ 0.47
CT55-201ENST00000276241 HTATSF1O43719 755 aaKnown RBP17.99■□□□□ 0.47
CT55-201ENST00000276241 ADRA2BP18089 450 aa17.99■□□□□ 0.47
CT55-201ENST00000276241 ARHGEF1Q92888 912 aaKnown RBP17.99■□□□□ 0.47
CT55-201ENST00000276241 CYP19A1P11511 503 aaPredicted RBP17.98■□□□□ 0.47
CT55-201ENST00000276241 RFC4P35249 363 aa17.98■□□□□ 0.47
CT55-201ENST00000276241 INTS5Q6P9B9 1019 aaKnown RBP17.98■□□□□ 0.47
CT55-201ENST00000276241 VSIG10Q8N0Z9 540 aa17.98■□□□□ 0.47
CT55-201ENST00000276241 FMNL2Q96PY5 1086 aa17.98■□□□□ 0.47
CT55-201ENST00000276241 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
CT55-201ENST00000276241 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
CT55-201ENST00000276241 COL15A1P39059 1388 aa17.96■□□□□ 0.47
CT55-201ENST00000276241 SOS1Q07889 1333 aaPredicted RBP17.96■□□□□ 0.47
CT55-201ENST00000276241 SRP68Q9UHB9 627 aaKnown RBP17.96■□□□□ 0.47
CT55-201ENST00000276241 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.47
CT55-201ENST00000276241 KDM3BQ7LBC6 1761 aa17.95■□□□□ 0.46
CT55-201ENST00000276241 CANXP27824 592 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms