RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 CDK13Q14004 1512 aaKnown RBP13.93□□□□□ -0.18
SHPRH-201ENST00000275233 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
SHPRH-201ENST00000275233 LIG1P18858 919 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 EIF5P55010 431 aaKnown RBP13.93□□□□□ -0.18
SHPRH-201ENST00000275233 FILIP1Q7Z7B0 1213 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 RPGRQ92834 1020 aaKnown RBP13.93□□□□□ -0.18
SHPRH-201ENST00000275233 NGLY1Q96IV0 654 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 DAPK1P53355 1430 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 CCDC191Q8NCU4 936 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 GOLGA6L10A6NI86 522 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 TAF7Q15545 349 aaPredicted RBP13.93□□□□□ -0.18
SHPRH-201ENST00000275233 JARID2Q92833 1246 aaPredicted RBP13.93□□□□□ -0.18
SHPRH-201ENST00000275233 NUP62CLQ9H1M0 184 aa13.93□□□□□ -0.18
SHPRH-201ENST00000275233 LUC7LQ9NQ29 371 aaKnown RBP13.93□□□□□ -0.18
SHPRH-201ENST00000275233 KLHL10Q6JEL2 608 aa13.92□□□□□ -0.18
SHPRH-201ENST00000275233 KIAA1328Q86T90 577 aa13.92□□□□□ -0.18
SHPRH-201ENST00000275233 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
SHPRH-201ENST00000275233 UPF3BQ9BZI7 483 aaKnown RBP13.92□□□□□ -0.18
SHPRH-201ENST00000275233 NAPBQ9H115 298 aa13.92□□□□□ -0.18
SHPRH-201ENST00000275233 ZBTB3Q9H5J0 574 aa13.92□□□□□ -0.18
SHPRH-201ENST00000275233 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
SHPRH-201ENST00000275233 SUPT6HQ7KZ85 1726 aaKnown RBP13.92□□□□□ -0.18
SHPRH-201ENST00000275233 EMILIN1Q9Y6C2 1016 aa13.91□□□□□ -0.18
SHPRH-201ENST00000275233 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
SHPRH-201ENST00000275233 IFIT5Q13325 482 aaKnown RBP13.91□□□□□ -0.18
SHPRH-201ENST00000275233 CBFA2T2O43439 604 aa13.91□□□□□ -0.18
SHPRH-201ENST00000275233 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
SHPRH-201ENST00000275233 KRT32Q14532 448 aa13.91□□□□□ -0.18
SHPRH-201ENST00000275233 FBXO31Q5XUX0 539 aaPredicted RBP13.91□□□□□ -0.18
SHPRH-201ENST00000275233 WASF1Q92558 559 aa13.91□□□□□ -0.18
SHPRH-201ENST00000275233 LARP1Q6PKG0 1096 aaKnown RBP13.9□□□□□ -0.18
SHPRH-201ENST00000275233 MX1P20591 662 aa13.9□□□□□ -0.18
SHPRH-201ENST00000275233 TAF3Q5VWG9 929 aa13.9□□□□□ -0.18
SHPRH-201ENST00000275233 CCDC97Q96F63 343 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-201ENST00000275233 TROQ12816 1431 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-201ENST00000275233 ZSCAN31Q96LW9 406 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-201ENST00000275233 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
SHPRH-201ENST00000275233 ZNF444Q8N0Y2 327 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-201ENST00000275233 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
SHPRH-201ENST00000275233 C6orf229H3BNL8 230 aa13.9□□□□□ -0.19
SHPRH-201ENST00000275233 AMOTL2Q9Y2J4 779 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 RPGRIP1LQ68CZ1 1315 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 PPM1FP49593 454 aaPredicted RBP13.89□□□□□ -0.19
SHPRH-201ENST00000275233 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 IFT140Q96RY7 1462 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 CFAP100Q494V2 611 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 LEKR1Q6ZMV7 388 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 BACH2Q9BYV9 841 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 TMX1Q9H3N1 280 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
SHPRH-201ENST00000275233 ATP5J2-PTCD1G3V325 749 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 CCT2P78371 535 aaKnown RBP13.89□□□□□ -0.19
SHPRH-201ENST00000275233 TNIP1Q15025 636 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 VAT1LQ9HCJ6 419 aa13.89□□□□□ -0.19
SHPRH-201ENST00000275233 SLC5A1P13866 664 aa13.88□□□□□ -0.19
SHPRH-201ENST00000275233 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
SHPRH-201ENST00000275233 RPAP2Q8IXW5 612 aaPredicted RBP13.88□□□□□ -0.19
SHPRH-201ENST00000275233 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
SHPRH-201ENST00000275233 RAB11FIP4Q86YS3 637 aa13.88□□□□□ -0.19
SHPRH-201ENST00000275233 GRPEL1Q9HAV7 217 aa13.88□□□□□ -0.19
SHPRH-201ENST00000275233 SYCE3A1L190 88 aa13.88□□□□□ -0.19
SHPRH-201ENST00000275233 DNA2P51530 1060 aa13.88□□□□□ -0.19
SHPRH-201ENST00000275233 CWC15Q9P013 229 aaKnown RBP13.88□□□□□ -0.19
SHPRH-201ENST00000275233 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
SHPRH-201ENST00000275233 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 MAP3K12Q12852 859 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 ZRSR2Q15696 482 aaKnown RBP13.87□□□□□ -0.19
SHPRH-201ENST00000275233 CCDC112Q8NEF3 446 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 ZNF287Q9HBT7 754 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 WWC3Q9ULE0 1092 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 PHF8Q9UPP1 1060 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 EPRSP07814 1512 aaKnown RBP13.87□□□□□ -0.19
SHPRH-201ENST00000275233 A0A087WZG4 1122 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 ANKRD18BA2A2Z9 1011 aa13.87□□□□□ -0.19
SHPRH-201ENST00000275233 ZNF622Q969S3 477 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■□□□□ 11.3
SHPRH-201ENST00000275233 C11orf95C9JLR9 678 aaPredicted RBP13.86□□□□□ -0.19
SHPRH-201ENST00000275233 MAP3K2Q9Y2U5 619 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 ZNF213O14771 459 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 C20orf194Q5TEA3 1177 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 SNRKQ9NRH2 765 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 ANKRD18AQ8IVF6 992 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 SLC12A7Q9Y666 1083 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 CC2D2AQ9P2K1 1620 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 EXOC5O00471 708 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 GLRX3O76003 335 aaKnown RBP13.86□□□□□ -0.19
SHPRH-201ENST00000275233 DESP17661 470 aa13.86□□□□□ -0.19
SHPRH-201ENST00000275233 RAB11FIP3O75154 756 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 TNNT1P13805 278 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 KRT28Q7Z3Y7 464 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 TSHZ3Q63HK5 1081 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 SMTNL1A8MU46 457 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 GBP2P32456 591 aaPredicted RBP13.85□□□□□ -0.19
SHPRH-201ENST00000275233 NLRP5P59047 1200 aa13.85□□□□□ -0.19
SHPRH-201ENST00000275233 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
SHPRH-201ENST00000275233 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms