RNA–Protein interactions for RNA: ENST00000274456.6

TNFAIP8-201, Transcript of TNF alpha induced protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP8, Length 795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP8-201ENST00000274456 GOLGA2Q08379 1002 aa12.08□□□□□ -0.48
TNFAIP8-201ENST00000274456 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP8-201ENST00000274456 PTF1AQ7RTS3 328 aa12.08□□□□□ -0.48
TNFAIP8-201ENST00000274456 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP8-201ENST00000274456 CEMIPQ8WUJ3 1361 aa12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 TRIM37O94972 964 aa12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 CCDC27Q2M243 656 aa12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 TOGARAM1Q9Y4F4 1720 aa12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 SCN11AQ9UI33 1791 aa12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 ZNF521Q96K83 1311 aa12.07□□□□□ -0.48
TNFAIP8-201ENST00000274456 DCTN1Q14203 1278 aa12.06□□□□□ -0.48
TNFAIP8-201ENST00000274456 MCM10Q7L590 875 aa12.06□□□□□ -0.48
TNFAIP8-201ENST00000274456 WWC1Q8IX03 1113 aa12.06□□□□□ -0.48
TNFAIP8-201ENST00000274456 PIGBQ92521 554 aa12.06□□□□□ -0.48
TNFAIP8-201ENST00000274456 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
TNFAIP8-201ENST00000274456 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFAIP8-201ENST00000274456 DOT1LQ8TEK3 1739 aa12.06□□□□□ -0.48
TNFAIP8-201ENST00000274456 ITGB4P16144 1822 aa12.05□□□□□ -0.48
TNFAIP8-201ENST00000274456 E9PSI1 815 aa12.05□□□□□ -0.48
TNFAIP8-201ENST00000274456 CCDC125Q86Z20 511 aa12.05□□□□□ -0.48
TNFAIP8-201ENST00000274456 NFATC2IPQ8NCF5 419 aa12.05□□□□□ -0.48
TNFAIP8-201ENST00000274456 SLC52A2Q9HAB3 445 aa12.05□□□□□ -0.48
TNFAIP8-201ENST00000274456 NHSQ6T4R5 1651 aa12.05□□□□□ -0.48
TNFAIP8-201ENST00000274456 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
TNFAIP8-201ENST00000274456 MRC1P22897 1456 aa12.04□□□□□ -0.48
TNFAIP8-201ENST00000274456 CABP4P57796 275 aa12.04□□□□□ -0.48
TNFAIP8-201ENST00000274456 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
TNFAIP8-201ENST00000274456 WDR63Q8IWG1 891 aa12.04□□□□□ -0.48
TNFAIP8-201ENST00000274456 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP8-201ENST00000274456 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
TNFAIP8-201ENST00000274456 THUMPD2Q9BTF0 503 aaKnown RBP12.03□□□□□ -0.48
TNFAIP8-201ENST00000274456 TMOD3Q9NYL9 352 aa12.03□□□□□ -0.48
TNFAIP8-201ENST00000274456 PLSCR1O15162 318 aa12.02□□□□□ -0.49
TNFAIP8-201ENST00000274456 APBA3O96018 575 aa12.02□□□□□ -0.49
TNFAIP8-201ENST00000274456 CALD1Q05682 793 aaKnown RBP12.02□□□□□ -0.49
TNFAIP8-201ENST00000274456 SLFN5Q08AF3 891 aa12.02□□□□□ -0.49
TNFAIP8-201ENST00000274456 TEFQ10587 303 aa12.02□□□□□ -0.49
TNFAIP8-201ENST00000274456 ATG3Q9NT62 314 aa12.02□□□□□ -0.49
TNFAIP8-201ENST00000274456 TNS1Q9HBL0 1735 aaKnown RBP12.02□□□□□ -0.49
TNFAIP8-201ENST00000274456 BTAF1O14981 1849 aa12.02□□□□□ -0.49
TNFAIP8-201ENST00000274456 SIPA1L3O60292 1781 aaPredicted RBP12.01□□□□□ -0.49
TNFAIP8-201ENST00000274456 NEFLP07196 543 aa12.01□□□□□ -0.49
TNFAIP8-201ENST00000274456 TAF7Q15545 349 aaPredicted RBP12.01□□□□□ -0.49
TNFAIP8-201ENST00000274456 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
TNFAIP8-201ENST00000274456 SF3B2Q13435 895 aaKnown RBP12□□□□□ -0.49
TNFAIP8-201ENST00000274456 MYH16Q9H6N6 1097 aa12□□□□□ -0.49
TNFAIP8-201ENST00000274456 IL16Q14005 1332 aa12□□□□□ -0.49
TNFAIP8-201ENST00000274456 BTBD11A6QL63 1104 aa11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 SLC39A6Q13433 755 aa11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 DUSP27Q5VZP5 1158 aa11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 DEFB132Q7Z7B7 95 aa11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 PROM2Q8N271 834 aa11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 SMARCC1Q92922 1105 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 CAMKK2Q96RR4 588 aa11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 BABAM1Q9NWV8 329 aa11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 SUPT16HQ9Y5B9 1047 aaKnown RBP11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 GTF3C3Q9Y5Q9 886 aa11.99□□□□□ -0.49
TNFAIP8-201ENST00000274456 CHL1O00533 1208 aa11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 SOCS7O14512 581 aa11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 KCNQ3O43525 872 aa11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 ZNF853P0CG23 659 aa11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 BAG6P46379 1132 aa11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 ZNF790Q6PG37 636 aa11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 MIS18AQ9NYP9 233 aa11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 RCAN3Q9UKA8 241 aa11.98□□□□□ -0.49
TNFAIP8-201ENST00000274456 PALLDQ8WX93 1383 aa11.97□□□□□ -0.49
TNFAIP8-201ENST00000274456 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
TNFAIP8-201ENST00000274456 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
TNFAIP8-201ENST00000274456 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
TNFAIP8-201ENST00000274456 LOC102724428A0A0B4J2F2 783 aa11.96□□□□□ -0.49
TNFAIP8-201ENST00000274456 SIK1P57059 783 aa11.96□□□□□ -0.49
TNFAIP8-201ENST00000274456 SLC4A9Q96Q91 983 aa11.96□□□□□ -0.49
TNFAIP8-201ENST00000274456 IFT57Q9NWB7 429 aa11.96□□□□□ -0.49
TNFAIP8-201ENST00000274456 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.49
TNFAIP8-201ENST00000274456 RGPD4Q7Z3J3 1758 aa11.96□□□□□ -0.49
TNFAIP8-201ENST00000274456 LY75O60449 1722 aa11.96□□□□□ -0.49
TNFAIP8-201ENST00000274456 PTCD1O75127 700 aaKnown RBP11.95□□□□□ -0.5
TNFAIP8-201ENST00000274456 TXNRD1Q16881 649 aa11.95□□□□□ -0.5
TNFAIP8-201ENST00000274456 SLC27A3Q5K4L6 730 aa11.95□□□□□ -0.5
TNFAIP8-201ENST00000274456 ZNF496Q96IT1 587 aaPredicted RBP11.95□□□□□ -0.5
TNFAIP8-201ENST00000274456 LRRC4BQ9NT99 713 aa11.95□□□□□ -0.5
TNFAIP8-201ENST00000274456 TSPYL4Q9UJ04 414 aa11.95□□□□□ -0.5
TNFAIP8-201ENST00000274456 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
TNFAIP8-201ENST00000274456 EIF4A1P60842 406 aaKnown RBP11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 GNAI1P63096 354 aa11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 TTC5Q8N0Z6 440 aa11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 MBIPQ9NS73 344 aa11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 KDM3BQ7LBC6 1761 aa11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 UBR2Q8IWV8 1755 aa11.94□□□□□ -0.5
TNFAIP8-201ENST00000274456 HEG1Q9ULI3 1381 aa11.93□□□□□ -0.5
TNFAIP8-201ENST00000274456 FANCIQ9NVI1 1328 aa11.93□□□□□ -0.5
TNFAIP8-201ENST00000274456 KCNQ4P56696 695 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms