RNA–Protein interactions for RNA: ENST00000273347.9

NXPE3-201, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-201ENST00000273347 NBPF4Q96M43 638 aa16.85■□□□□ 0.29
NXPE3-201ENST00000273347 PNMA6EA0A0J9YXQ4 647 aa16.85■□□□□ 0.29
NXPE3-201ENST00000273347 IP6K1Q92551 441 aa16.85■□□□□ 0.29
NXPE3-201ENST00000273347 SOS1Q07889 1333 aaPredicted RBP16.85■□□□□ 0.29
NXPE3-201ENST00000273347 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
NXPE3-201ENST00000273347 FLIIQ13045 1269 aa16.84■□□□□ 0.29
NXPE3-201ENST00000273347 RAB3GAP1Q15042 981 aa16.84■□□□□ 0.29
NXPE3-201ENST00000273347 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
NXPE3-201ENST00000273347 IBTKQ9P2D0 1353 aaPredicted RBP16.84■□□□□ 0.29
NXPE3-201ENST00000273347 OVOS2A0A0G2JMS6 1433 aa16.84■□□□□ 0.29
NXPE3-201ENST00000273347 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.29
NXPE3-201ENST00000273347 RBM33Q96EV2 1170 aaKnown RBP16.83■□□□□ 0.29
NXPE3-201ENST00000273347 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.29
NXPE3-201ENST00000273347 CCT4P50991 539 aaKnown RBP16.83■□□□□ 0.28
NXPE3-201ENST00000273347 ABTB2Q8N961 1025 aa16.83■□□□□ 0.28
NXPE3-201ENST00000273347 CLEC17AQ6ZS10 378 aa16.83■□□□□ 0.28
NXPE3-201ENST00000273347 PKD1L3Q7Z443 1732 aa16.82■□□□□ 0.28
NXPE3-201ENST00000273347 IL17RAQ96F46 866 aa16.81■□□□□ 0.28
NXPE3-201ENST00000273347 USP44Q9H0E7 712 aa16.81■□□□□ 0.28
NXPE3-201ENST00000273347 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
NXPE3-201ENST00000273347 CYP2E1P05181 493 aaPredicted RBP16.81■□□□□ 0.28
NXPE3-201ENST00000273347 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
NXPE3-201ENST00000273347 LGR6Q9HBX8 967 aa16.81■□□□□ 0.28
NXPE3-201ENST00000273347 ABCC6O95255 1503 aa16.81■□□□□ 0.28
NXPE3-201ENST00000273347 PLPPR3Q6T4P5 718 aa16.8■□□□□ 0.28
NXPE3-201ENST00000273347 HSCBQ8IWL3 235 aa16.8■□□□□ 0.28
NXPE3-201ENST00000273347 PDE1AP54750 535 aa16.8■□□□□ 0.28
NXPE3-201ENST00000273347 TAF7Q15545 349 aaPredicted RBP16.8■□□□□ 0.28
NXPE3-201ENST00000273347 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
NXPE3-201ENST00000273347 K7ELQ4 463 aaPredicted RBP16.79■□□□□ 0.28
NXPE3-201ENST00000273347 EIF4A1P60842 406 aaKnown RBP16.79■□□□□ 0.28
NXPE3-201ENST00000273347 PHAXQ9H814 394 aaKnown RBP16.79■□□□□ 0.28
NXPE3-201ENST00000273347 ADCY9O60503 1353 aa16.79■□□□□ 0.28
NXPE3-201ENST00000273347 KCNQ3O43525 872 aa16.79■□□□□ 0.28
NXPE3-201ENST00000273347 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
NXPE3-201ENST00000273347 ATP8B2P98198 1209 aa16.78■□□□□ 0.28
NXPE3-201ENST00000273347 POLA2Q14181 598 aa16.78■□□□□ 0.28
NXPE3-201ENST00000273347 IL25Q9H293 177 aa16.78■□□□□ 0.28
NXPE3-201ENST00000273347 STAP2Q9UGK3 403 aa16.77■□□□□ 0.28
NXPE3-201ENST00000273347 PARP4Q9UKK3 1724 aaKnown RBP16.77■□□□□ 0.27
NXPE3-201ENST00000273347 CCDC30Q5VVM6 783 aa16.77■□□□□ 0.27
NXPE3-201ENST00000273347 ARHGEF25Q86VW2 580 aa16.77■□□□□ 0.27
NXPE3-201ENST00000273347 GNAI2P04899 355 aa16.76■□□□□ 0.27
NXPE3-201ENST00000273347 TSHZ3Q63HK5 1081 aa16.76■□□□□ 0.27
NXPE3-201ENST00000273347 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
NXPE3-201ENST00000273347 LRRC59Q96AG4 307 aaKnown RBP16.76■□□□□ 0.27
NXPE3-201ENST00000273347 MRC1P22897 1456 aa16.76■□□□□ 0.27
NXPE3-201ENST00000273347 ANKLE2Q86XL3 938 aa16.75■□□□□ 0.27
NXPE3-201ENST00000273347 AXIN2Q9Y2T1 843 aa16.75■□□□□ 0.27
NXPE3-201ENST00000273347 SHANK3Q9BYB0 1731 aa16.75■□□□□ 0.27
NXPE3-201ENST00000273347 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
NXPE3-201ENST00000273347 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
NXPE3-201ENST00000273347 SSH3Q8TE77 659 aa16.75■□□□□ 0.27
NXPE3-201ENST00000273347 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
NXPE3-201ENST00000273347 UNC5CLQ8IV45 518 aa16.75■□□□□ 0.27
NXPE3-201ENST00000273347 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
NXPE3-201ENST00000273347 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
NXPE3-201ENST00000273347 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
NXPE3-201ENST00000273347 TRAK2O60296 914 aa16.74■□□□□ 0.27
NXPE3-201ENST00000273347 LAMB4A4D0S4 1761 aa16.73■□□□□ 0.27
NXPE3-201ENST00000273347 XRCC6P12956 609 aaKnown RBP eCLIP16.73■□□□□ 0.27
NXPE3-201ENST00000273347 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
NXPE3-201ENST00000273347 UBR2Q8IWV8 1755 aa16.73■□□□□ 0.27
NXPE3-201ENST00000273347 HOXB7P09629 217 aa16.72■□□□□ 0.27
NXPE3-201ENST00000273347 ZDHHC9Q9Y397 364 aa16.72■□□□□ 0.27
NXPE3-201ENST00000273347 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
NXPE3-201ENST00000273347 PAPPAQ13219 1627 aa16.72■□□□□ 0.27
NXPE3-201ENST00000273347 PKP1Q13835 747 aa16.72■□□□□ 0.27
NXPE3-201ENST00000273347 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
NXPE3-201ENST00000273347 FKBP5Q13451 457 aaPredicted RBP16.72■□□□□ 0.27
NXPE3-201ENST00000273347 RABEP1Q15276 862 aa16.72■□□□□ 0.27
NXPE3-201ENST00000273347 SSFA2P28290 1259 aa16.71■□□□□ 0.27
NXPE3-201ENST00000273347 PI4K2BQ8TCG2 481 aa16.71■□□□□ 0.27
NXPE3-201ENST00000273347 APBB1O00213 710 aa16.71■□□□□ 0.27
NXPE3-201ENST00000273347 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
NXPE3-201ENST00000273347 NBPF7P0C2Y1 421 aaPredicted RBP16.7■□□□□ 0.26
NXPE3-201ENST00000273347 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
NXPE3-201ENST00000273347 CHPF2Q9P2E5 772 aa16.7■□□□□ 0.26
NXPE3-201ENST00000273347 ABCA3Q99758 1704 aa16.7■□□□□ 0.26
NXPE3-201ENST00000273347 GCP02774 474 aa16.7■□□□□ 0.26
NXPE3-201ENST00000273347 STK31Q9BXU1 1019 aa16.7■□□□□ 0.26
NXPE3-201ENST00000273347 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
NXPE3-201ENST00000273347 GNAI3P08754 354 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 GAS2L3Q86XJ1 694 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 AOX1Q06278 1338 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 ESYT1Q9BSJ8 1104 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 PANK2Q9BZ23 570 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 MEGF6O75095 1541 aa16.69■□□□□ 0.26
NXPE3-201ENST00000273347 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
NXPE3-201ENST00000273347 AFDNP55196 1824 aaKnown RBP16.68■□□□□ 0.26
NXPE3-201ENST00000273347 TJP1Q07157 1748 aa16.68■□□□□ 0.26
NXPE3-201ENST00000273347 HMMRO75330 724 aa16.68■□□□□ 0.26
NXPE3-201ENST00000273347 MX1P20591 662 aa16.68■□□□□ 0.26
NXPE3-201ENST00000273347 PROSER3Q2NL68 480 aa16.68■□□□□ 0.26
NXPE3-201ENST00000273347 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
NXPE3-201ENST00000273347 CHMLP26374 656 aa16.68■□□□□ 0.26
NXPE3-201ENST00000273347 KCNH5Q8NCM2 988 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms