RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 KIF6Q6ZMV9 814 aa18.28■□□□□ 0.52
UBR3-201ENST00000272793 NAA15Q9BXJ9 866 aaKnown RBP18.28■□□□□ 0.52
UBR3-201ENST00000272793 PUF60Q9UHX1 559 aaKnown RBP18.28■□□□□ 0.52
UBR3-201ENST00000272793 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
UBR3-201ENST00000272793 COG3Q96JB2 828 aa18.27■□□□□ 0.52
UBR3-201ENST00000272793 TNIP1Q15025 636 aa18.27■□□□□ 0.52
UBR3-201ENST00000272793 ESPNB1AK53 854 aa18.27■□□□□ 0.52
UBR3-201ENST00000272793 LRRC45Q96CN5 670 aa18.27■□□□□ 0.52
UBR3-201ENST00000272793 FKBP15Q5T1M5 1219 aa18.27■□□□□ 0.51
UBR3-201ENST00000272793 FAM114A2Q9NRY5 505 aa18.27■□□□□ 0.51
UBR3-201ENST00000272793 NOP2P46087 812 aaKnown RBP18.26■□□□□ 0.51
UBR3-201ENST00000272793 CNNM1Q9NRU3 951 aa18.26■□□□□ 0.51
UBR3-201ENST00000272793 PFDN4Q9NQP4 134 aa18.26■□□□□ 0.51
UBR3-201ENST00000272793 HSF2BPO75031 334 aa18.26■□□□□ 0.51
UBR3-201ENST00000272793 TSG101Q99816 390 aa18.26■□□□□ 0.51
UBR3-201ENST00000272793 MAP3K9P80192 1104 aa18.26■□□□□ 0.51
UBR3-201ENST00000272793 MYH10P35580 1976 aa18.25■□□□□ 0.51
UBR3-201ENST00000272793 MAP4K4O95819 1239 aaPredicted RBP18.25■□□□□ 0.51
UBR3-201ENST00000272793 NUP88Q99567 741 aaPredicted RBP18.25■□□□□ 0.51
UBR3-201ENST00000272793 TDO2P48775 406 aa18.25■□□□□ 0.51
UBR3-201ENST00000272793 SNX16P57768 344 aa18.25■□□□□ 0.51
UBR3-201ENST00000272793 DDX27Q96GQ7 796 aaKnown RBP18.25■□□□□ 0.51
UBR3-201ENST00000272793 TERF1P54274 439 aa18.25■□□□□ 0.51
UBR3-201ENST00000272793 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
UBR3-201ENST00000272793 C1orf115Q9H7X2 142 aa18.25■□□□□ 0.51
UBR3-201ENST00000272793 BICDL2A1A5D9 508 aa18.24■□□□□ 0.51
UBR3-201ENST00000272793 HMOX1P09601 288 aa18.24■□□□□ 0.51
UBR3-201ENST00000272793 ACTN2P35609 894 aa18.24■□□□□ 0.51
UBR3-201ENST00000272793 LIG1P18858 919 aa18.24■□□□□ 0.51
UBR3-201ENST00000272793 GOLGA6L9A6NEM1 432 aa18.24■□□□□ 0.51
UBR3-201ENST00000272793 KRT85P78386 507 aa18.24■□□□□ 0.51
UBR3-201ENST00000272793 API5Q9BZZ5 524 aaKnown RBP18.24■□□□□ 0.51
UBR3-201ENST00000272793 HIP1O00291 1037 aa18.23■□□□□ 0.51
UBR3-201ENST00000272793 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■□ 19.5
UBR3-201ENST00000272793 TACC1O75410 805 aa18.23■□□□□ 0.51
UBR3-201ENST00000272793 TSPYL4Q9UJ04 414 aa18.23■□□□□ 0.51
UBR3-201ENST00000272793 PPFIA2O75334 1257 aa18.23■□□□□ 0.51
UBR3-201ENST00000272793 UBTFL1P0CB47 393 aaPredicted RBP18.23■□□□□ 0.51
UBR3-201ENST00000272793 TDRD12Q587J7 1177 aaKnown RBP18.23■□□□□ 0.51
UBR3-201ENST00000272793 CTAGE6Q86UF2 777 aa18.23■□□□□ 0.51
UBR3-201ENST00000272793 NSRP1Q9H0G5 558 aaKnown RBP18.23■□□□□ 0.51
UBR3-201ENST00000272793 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
UBR3-201ENST00000272793 KIF5BP33176 963 aa18.23■□□□□ 0.51
UBR3-201ENST00000272793 CAMK4Q16566 473 aa18.23■□□□□ 0.51
UBR3-201ENST00000272793 PDCD7Q8N8D1 485 aaKnown RBP18.23■□□□□ 0.51
UBR3-201ENST00000272793 GNL3LQ9NVN8 582 aaKnown RBP18.22■□□□□ 0.51
UBR3-201ENST00000272793 ZSCAN12O43309 604 aa18.22■□□□□ 0.51
UBR3-201ENST00000272793 MCM2P49736 904 aa18.22■□□□□ 0.51
UBR3-201ENST00000272793 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
UBR3-201ENST00000272793 PSME1Q06323 249 aa18.22■□□□□ 0.51
UBR3-201ENST00000272793 LCA5Q86VQ0 697 aa18.22■□□□□ 0.51
UBR3-201ENST00000272793 SETDB1Q15047 1291 aa18.21■□□□□ 0.51
UBR3-201ENST00000272793 DIXDC1Q155Q3 683 aa18.21■□□□□ 0.51
UBR3-201ENST00000272793 ANKRD1Q15327 319 aa18.21■□□□□ 0.51
UBR3-201ENST00000272793 C10orf67Q8IYJ2 551 aa18.21■□□□□ 0.51
UBR3-201ENST00000272793 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
UBR3-201ENST00000272793 SPATA32Q96LK8 384 aa18.21■□□□□ 0.51
UBR3-201ENST00000272793 CCDC89Q8N998 374 aa18.21■□□□□ 0.51
UBR3-201ENST00000272793 FHAD1B1AJZ9 1412 aa18.21■□□□□ 0.51
UBR3-201ENST00000272793 PRC1O43663 620 aa18.2■□□□□ 0.5
UBR3-201ENST00000272793 FGFR1OPO95684 399 aaKnown RBP18.2■□□□□ 0.5
UBR3-201ENST00000272793 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
UBR3-201ENST00000272793 GEN1Q17RS7 908 aa18.2■□□□□ 0.5
UBR3-201ENST00000272793 LARP1BQ659C4 914 aaKnown RBP18.2■□□□□ 0.5
UBR3-201ENST00000272793 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
UBR3-201ENST00000272793 SYNCQ9H7C4 482 aa18.2■□□□□ 0.5
UBR3-201ENST00000272793 JADE2Q9NQC1 790 aa18.2■□□□□ 0.5
UBR3-201ENST00000272793 SYCE3A1L190 88 aa18.19■□□□□ 0.5
UBR3-201ENST00000272793 OPA1O60313 960 aa18.19■□□□□ 0.5
UBR3-201ENST00000272793 STMN1P16949 149 aa18.19■□□□□ 0.5
UBR3-201ENST00000272793 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
UBR3-201ENST00000272793 SPTY2D1Q68D10 685 aaPredicted RBP18.19■□□□□ 0.5
UBR3-201ENST00000272793 TRMT1Q9NXH9 659 aaKnown RBP18.19■□□□□ 0.5
UBR3-201ENST00000272793 ATP6V1E1P36543 226 aa18.19■□□□□ 0.5
UBR3-201ENST00000272793 MICALL1Q8N3F8 863 aa18.19■□□□□ 0.5
UBR3-201ENST00000272793 CEP131Q9UPN4 1083 aa18.19■□□□□ 0.5
UBR3-201ENST00000272793 MGEA5O60502 916 aa18.18■□□□□ 0.5
UBR3-201ENST00000272793 SEC63Q9UGP8 760 aaKnown RBP18.18■□□□□ 0.5
UBR3-201ENST00000272793 CKAP4Q07065 602 aaKnown RBP18.18■□□□□ 0.5
UBR3-201ENST00000272793 ZBTB9Q96C00 473 aa18.18■□□□□ 0.5
UBR3-201ENST00000272793 NUP62CLQ9H1M0 184 aa18.18■□□□□ 0.5
UBR3-201ENST00000272793 STIM2Q9P246 746 aa18.18■□□□□ 0.5
UBR3-201ENST00000272793 LRRC43Q8N309 656 aa18.18■□□□□ 0.5
UBR3-201ENST00000272793 ALS2CR12Q96Q35 445 aa18.18■□□□□ 0.5
UBR3-201ENST00000272793 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
UBR3-201ENST00000272793 NUF2Q9BZD4 464 aa18.18■□□□□ 0.5
UBR3-201ENST00000272793 SFPQP23246 707 aaKnown RBP eCLIP18.17■□□□□ 0.5
UBR3-201ENST00000272793 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
UBR3-201ENST00000272793 SURF6O75683 361 aaKnown RBP18.17■□□□□ 0.5
UBR3-201ENST00000272793 PAXIP1Q6ZW49 1069 aaPredicted RBP18.17■□□□□ 0.5
UBR3-201ENST00000272793 RABGAP1Q9Y3P9 1069 aa18.17■□□□□ 0.5
UBR3-201ENST00000272793 MORC4Q8TE76 937 aa18.17■□□□□ 0.5
UBR3-201ENST00000272793 CASQ2O14958 399 aaPredicted RBP18.17■□□□□ 0.5
UBR3-201ENST00000272793 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
UBR3-201ENST00000272793 CFAP157Q5JU67 520 aa18.17■□□□□ 0.5
UBR3-201ENST00000272793 CHMP2AO43633 222 aa18.17■□□□□ 0.5
UBR3-201ENST00000272793 A0A1B0GUL7 405 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 CDKL5O76039 1030 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 CRCPO75575 148 aa18.16■□□□□ 0.5
UBR3-201ENST00000272793 TOP1P11387 765 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms