RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 CEP126Q9P2H0 1117 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 ZNF444Q8N0Y2 327 aaPredicted RBP14.65□□□□□ -0.06
CDH11-201ENST00000268603 IPO4Q8TEX9 1081 aaKnown RBP14.65□□□□□ -0.06
CDH11-201ENST00000268603 SPATA32Q96LK8 384 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 ZNF530Q6P9A1 599 aaPredicted RBP14.65□□□□□ -0.06
CDH11-201ENST00000268603 UPF3BQ9BZI7 483 aaKnown RBP14.65□□□□□ -0.06
CDH11-201ENST00000268603 MCM2P49736 904 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 KRT85P78386 507 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 IMMTQ16891 758 aaKnown RBP14.65□□□□□ -0.06
CDH11-201ENST00000268603 METTL24Q5JXM2 366 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 TXNDC2Q86VQ3 553 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 ZNF652Q9Y2D9 606 aa14.65□□□□□ -0.06
CDH11-201ENST00000268603 CTNNA3Q9UI47 895 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 PRC1O43663 620 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 TAF12Q16514 161 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 MPHOSPH6Q99547 160 aaKnown RBP14.64□□□□□ -0.07
CDH11-201ENST00000268603 CFAP100Q494V2 611 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 PRPF4BQ13523 1007 aaKnown RBP14.64□□□□□ -0.07
CDH11-201ENST00000268603 SYNCQ9H7C4 482 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 CCDC18Q5T9S5 1454 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 TDRD12Q587J7 1177 aaKnown RBP14.64□□□□□ -0.07
CDH11-201ENST00000268603 SYCP3Q8IZU3 236 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 MMRN2Q9H8L6 949 aa14.64□□□□□ -0.07
CDH11-201ENST00000268603 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
CDH11-201ENST00000268603 TMEM266Q2M3C6 531 aa14.63□□□□□ -0.07
CDH11-201ENST00000268603 FILIP1Q7Z7B0 1213 aa14.63□□□□□ -0.07
CDH11-201ENST00000268603 DAAM2Q86T65 1068 aa14.63□□□□□ -0.07
CDH11-201ENST00000268603 STAC3Q96MF2 364 aa14.63□□□□□ -0.07
CDH11-201ENST00000268603 UTP14AQ9BVJ6 771 aaKnown RBP14.63□□□□□ -0.07
CDH11-201ENST00000268603 FSD2A1L4K1 749 aa14.63□□□□□ -0.07
CDH11-201ENST00000268603 SMTNL1A8MU46 457 aa14.63□□□□□ -0.07
CDH11-201ENST00000268603 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 SPECC1Q5M775 1068 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 HMGB2P26583 209 aaKnown RBP14.62□□□□□ -0.07
CDH11-201ENST00000268603 PSMC4P43686 418 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 RAD54L2Q9Y4B4 1467 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 CKAP2LQ8IYA6 745 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 TMX1Q9H3N1 280 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 PDRG1Q9NUG6 133 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
CDH11-201ENST00000268603 ACTN2P35609 894 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 XPCQ01831 940 aaPredicted RBP14.62□□□□□ -0.07
CDH11-201ENST00000268603 ZNF710Q8N1W2 664 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 TCERG1LQ5VWI1 586 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
CDH11-201ENST00000268603 CWC27Q6UX04 472 aaKnown RBP14.62□□□□□ -0.07
CDH11-201ENST00000268603 IKBKGQ9Y6K9 419 aa14.61□□□□□ -0.07
CDH11-201ENST00000268603 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
CDH11-201ENST00000268603 BAG4O95429 457 aaKnown RBP14.61□□□□□ -0.07
CDH11-201ENST00000268603 STARD3NLO95772 234 aa14.61□□□□□ -0.07
CDH11-201ENST00000268603 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
CDH11-201ENST00000268603 TAOK3Q9H2K8 898 aa14.61□□□□□ -0.07
CDH11-201ENST00000268603 BTBD11A6QL63 1104 aa14.61□□□□□ -0.07
CDH11-201ENST00000268603 CETN1Q12798 172 aa14.61□□□□□ -0.07
CDH11-201ENST00000268603 JAKMIP1Q96N16 626 aaKnown RBP14.61□□□□□ -0.07
CDH11-201ENST00000268603 SLC4A8Q2Y0W8 1093 aa14.61□□□□□ -0.07
CDH11-201ENST00000268603 BIRC2Q13490 618 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 C6orf163Q5TEZ5 329 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 MICALCLQ6ZW33 695 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 CCDC82Q8N4S0 544 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 SREK1Q8WXA9 508 aaKnown RBP14.6□□□□□ -0.07
CDH11-201ENST00000268603 RAB34Q9BZG1 259 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 C6orf229H3BNL8 230 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 ADAMTS2O95450 1211 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 FGFR1OPO95684 399 aaKnown RBP14.6□□□□□ -0.07
CDH11-201ENST00000268603 CASQ1P31415 396 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 NLRP5P59047 1200 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 ZNF622Q969S3 477 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDH11-201ENST00000268603 GBP3Q9H0R5 595 aa14.6□□□□□ -0.07
CDH11-201ENST00000268603 PRKAR2BP31323 418 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 SRCIN1Q9C0H9 1055 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 VAT1LQ9HCJ6 419 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 DPH6Q7L8W6 267 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 UBXN4Q92575 508 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 JPH4Q96JJ6 628 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 CCDC160A6NGH7 325 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 ODF2LQ9ULJ1 636 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 HLTFQ14527 1009 aaKnown RBP eCLIP14.59□□□□□ -0.07
CDH11-201ENST00000268603 MAP9Q49MG5 647 aa14.59□□□□□ -0.07
CDH11-201ENST00000268603 MXRA7P84157 204 aa14.58□□□□□ -0.08
CDH11-201ENST00000268603 PNISRQ8TF01 805 aaKnown RBP14.58□□□□□ -0.08
CDH11-201ENST00000268603 WDR33Q9C0J8 1336 aaKnown RBP14.58□□□□□ -0.08
CDH11-201ENST00000268603 USP47Q96K76 1375 aa14.58□□□□□ -0.08
CDH11-201ENST00000268603 MYO1BO43795 1136 aa14.57□□□□□ -0.08
CDH11-201ENST00000268603 NUP88Q99567 741 aaPredicted RBP14.57□□□□□ -0.08
CDH11-201ENST00000268603 NUP62CLQ9H1M0 184 aa14.57□□□□□ -0.08
CDH11-201ENST00000268603 NAP1L3Q99457 506 aaPredicted RBP14.57□□□□□ -0.08
CDH11-201ENST00000268603 TPD52P55327 224 aaPredicted RBP14.57□□□□□ -0.08
CDH11-201ENST00000268603 CAMK4Q16566 473 aa14.57□□□□□ -0.08
CDH11-201ENST00000268603 CTCFLQ8NI51 663 aaPredicted RBP14.57□□□□□ -0.08
CDH11-201ENST00000268603 IFIT1P09914 478 aaKnown RBP14.57□□□□□ -0.08
CDH11-201ENST00000268603 CABP5Q9NP86 173 aa14.57□□□□□ -0.08
CDH11-201ENST00000268603 NOB1Q9ULX3 412 aaKnown RBP14.57□□□□□ -0.08
CDH11-201ENST00000268603 PRKCSHP14314 528 aaPredicted RBP14.57□□□□□ -0.08
CDH11-201ENST00000268603 SULT6B1Q6IMI4 303 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms