RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 LETM1O95202 739 aaPredicted RBP18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 TMEM87AQ8NBN3 555 aa18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 PRAM1Q96QH2 718 aa18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 CPSF1Q10570 1443 aaKnown RBP18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 KRT24Q2M2I5 525 aa18.61■□□□□ 0.57
SCAMP2-201ENST00000268099 IL13P35225 146 aa18.61■□□□□ 0.57
SCAMP2-201ENST00000268099 CABP1Q9NZU7 370 aa18.61■□□□□ 0.57
SCAMP2-201ENST00000268099 KDM4AO75164 1064 aa18.6■□□□□ 0.57
SCAMP2-201ENST00000268099 MX1P20591 662 aa18.6■□□□□ 0.57
SCAMP2-201ENST00000268099 HMMRO75330 724 aa18.6■□□□□ 0.57
SCAMP2-201ENST00000268099 DIAPH3Q9NSV4 1193 aa18.6■□□□□ 0.57
SCAMP2-201ENST00000268099 DCTN1Q14203 1278 aa18.59■□□□□ 0.57
SCAMP2-201ENST00000268099 RPAP1Q9BWH6 1393 aaPredicted RBP18.59■□□□□ 0.57
SCAMP2-201ENST00000268099 SPDYE4A6NLX3 237 aa18.59■□□□□ 0.57
SCAMP2-201ENST00000268099 CHAF1AQ13111 956 aaPredicted RBP18.59■□□□□ 0.57
SCAMP2-201ENST00000268099 KIAA1524Q8TCG1 905 aa18.59■□□□□ 0.57
SCAMP2-201ENST00000268099 SRCIN1Q9C0H9 1055 aa18.59■□□□□ 0.57
SCAMP2-201ENST00000268099 EMILIN1Q9Y6C2 1016 aa18.59■□□□□ 0.57
SCAMP2-201ENST00000268099 ANKRD7Q92527 254 aa18.58■□□□□ 0.57
SCAMP2-201ENST00000268099 ANO2Q9NQ90 1003 aa18.58■□□□□ 0.57
SCAMP2-201ENST00000268099 RIOK3O14730 519 aaKnown RBP18.58■□□□□ 0.56
SCAMP2-201ENST00000268099 CDK19Q9BWU1 502 aa18.58■□□□□ 0.56
SCAMP2-201ENST00000268099 UPF3BQ9BZI7 483 aaKnown RBP18.58■□□□□ 0.56
SCAMP2-201ENST00000268099 TSHZ3Q63HK5 1081 aa18.57■□□□□ 0.56
SCAMP2-201ENST00000268099 IL17RAQ96F46 866 aa18.57■□□□□ 0.56
SCAMP2-201ENST00000268099 CNPY2Q9Y2B0 182 aa18.57■□□□□ 0.56
SCAMP2-201ENST00000268099 SSH2Q76I76 1423 aa18.57■□□□□ 0.56
SCAMP2-201ENST00000268099 PTPRCP08575 1304 aa18.57■□□□□ 0.56
SCAMP2-201ENST00000268099 CDK12Q9NYV4 1490 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-201ENST00000268099 HAP1P54257 671 aaPredicted RBP18.57■□□□□ 0.56
SCAMP2-201ENST00000268099 KCNF1Q9H3M0 494 aa18.56■□□□□ 0.56
SCAMP2-201ENST00000268099 PYCARDQ9ULZ3 195 aa18.56■□□□□ 0.56
SCAMP2-201ENST00000268099 CHMLP26374 656 aa18.56■□□□□ 0.56
SCAMP2-201ENST00000268099 UBE2HP62256 183 aa18.56■□□□□ 0.56
SCAMP2-201ENST00000268099 TPM3P06753 285 aa18.55■□□□□ 0.56
SCAMP2-201ENST00000268099 PLCB2Q00722 1185 aa18.55■□□□□ 0.56
SCAMP2-201ENST00000268099 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
SCAMP2-201ENST00000268099 CTIFO43310 598 aaKnown RBP18.55■□□□□ 0.56
SCAMP2-201ENST00000268099 U2AF2P26368 475 aaKnown RBP eCLIP18.55■□□□□ 0.56
SCAMP2-201ENST00000268099 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.55■□□□□ 0.56
SCAMP2-201ENST00000268099 DNAJC5Q9H3Z4 198 aa18.55■□□□□ 0.56
SCAMP2-201ENST00000268099 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
SCAMP2-201ENST00000268099 TPRNQ4KMQ1 711 aa18.54■□□□□ 0.56
SCAMP2-201ENST00000268099 FUCA2Q9BTY2 467 aa18.54■□□□□ 0.56
SCAMP2-201ENST00000268099 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
SCAMP2-201ENST00000268099 AP5Z1O43299 807 aa18.53■□□□□ 0.56
SCAMP2-201ENST00000268099 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.56
SCAMP2-201ENST00000268099 ATP7BP35670 1465 aa18.52■□□□□ 0.56
SCAMP2-201ENST00000268099 POGZQ7Z3K3 1410 aa18.52■□□□□ 0.56
SCAMP2-201ENST00000268099 KLHL34Q8N239 644 aa18.52■□□□□ 0.56
SCAMP2-201ENST00000268099 RILPL2Q969X0 211 aa18.52■□□□□ 0.56
SCAMP2-201ENST00000268099 EXOC6BQ9Y2D4 811 aa18.52■□□□□ 0.56
SCAMP2-201ENST00000268099 TRIM6-TRIM34B2RNG4 842 aa18.51■□□□□ 0.55
SCAMP2-201ENST00000268099 IDI1Q13907 227 aa18.51■□□□□ 0.55
SCAMP2-201ENST00000268099 GIMAP6Q6P9H5 292 aa18.51■□□□□ 0.55
SCAMP2-201ENST00000268099 FEZ1Q99689 392 aa18.51■□□□□ 0.55
SCAMP2-201ENST00000268099 GOLGA6L6A8MZA4 724 aa18.5■□□□□ 0.55
SCAMP2-201ENST00000268099 SPC24Q8NBT2 197 aa18.5■□□□□ 0.55
SCAMP2-201ENST00000268099 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
SCAMP2-201ENST00000268099 CHL1O00533 1208 aa18.49■□□□□ 0.55
SCAMP2-201ENST00000268099 FIBPO43427 364 aa18.49■□□□□ 0.55
SCAMP2-201ENST00000268099 STX6O43752 255 aa18.48■□□□□ 0.55
SCAMP2-201ENST00000268099 HSPA4P34932 840 aa18.48■□□□□ 0.55
SCAMP2-201ENST00000268099 F13A1P00488 732 aa18.48■□□□□ 0.55
SCAMP2-201ENST00000268099 SLC4A2P04920 1241 aa18.48■□□□□ 0.55
SCAMP2-201ENST00000268099 SYT1P21579 422 aa18.48■□□□□ 0.55
SCAMP2-201ENST00000268099 OGFRQ9NZT2 677 aa18.48■□□□□ 0.55
SCAMP2-201ENST00000268099 FGD1P98174 961 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 SLC4A10Q6U841 1118 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 ATP6V1DQ9Y5K8 247 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 AATKQ6ZMQ8 1374 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 IGSF3O75054 1194 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 GNAI2P04899 355 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 NCBP1Q09161 790 aaKnown RBP18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 NME9Q86XW9 330 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 ZRANB1Q9UGI0 708 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 MLH3Q9UHC1 1453 aa18.47■□□□□ 0.55
SCAMP2-201ENST00000268099 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
SCAMP2-201ENST00000268099 STAP2Q9UGK3 403 aa18.46■□□□□ 0.55
SCAMP2-201ENST00000268099 IL25Q9H293 177 aa18.46■□□□□ 0.55
SCAMP2-201ENST00000268099 F6X3S4 739 aa18.45■□□□□ 0.54
SCAMP2-201ENST00000268099 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
SCAMP2-201ENST00000268099 SYCP1Q15431 976 aa18.45■□□□□ 0.54
SCAMP2-201ENST00000268099 TAF3Q5VWG9 929 aa18.45■□□□□ 0.54
SCAMP2-201ENST00000268099 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.45■□□□□ 0.54
SCAMP2-201ENST00000268099 EDC4Q6P2E9 1401 aaKnown RBP18.45■□□□□ 0.54
SCAMP2-201ENST00000268099 CCDC192P0DO97 292 aa18.44■□□□□ 0.54
SCAMP2-201ENST00000268099 PTGS1P23219 599 aa18.44■□□□□ 0.54
SCAMP2-201ENST00000268099 MCM10Q7L590 875 aa18.44■□□□□ 0.54
SCAMP2-201ENST00000268099 ZNF771Q7L3S4 317 aaPredicted RBP18.44■□□□□ 0.54
SCAMP2-201ENST00000268099 TTC14Q96N46 770 aa18.44■□□□□ 0.54
SCAMP2-201ENST00000268099 SMC3Q9UQE7 1217 aa18.44■□□□□ 0.54
SCAMP2-201ENST00000268099 TMEM131LA2VDJ0 1609 aa18.44■□□□□ 0.54
SCAMP2-201ENST00000268099 PREX1Q8TCU6 1659 aa18.43■□□□□ 0.54
SCAMP2-201ENST00000268099 G2E3Q7L622 706 aa18.43■□□□□ 0.54
SCAMP2-201ENST00000268099 ALKQ9UM73 1620 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms