RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 LRRFIP2Q9Y608 721 aaKnown RBP23.21■■□□□ 1.31
SMARCC2-201ENST00000267064 RILPL2Q969X0 211 aa23.2■■□□□ 1.31
SMARCC2-201ENST00000267064 SSH2Q76I76 1423 aa23.2■■□□□ 1.3
SMARCC2-201ENST00000267064 C22orf23Q9BZE7 217 aa23.2■■□□□ 1.3
SMARCC2-201ENST00000267064 NUTM2BA6NNL0 878 aaPredicted RBP23.19■■□□□ 1.3
SMARCC2-201ENST00000267064 NUTM2EB1AL46 878 aaPredicted RBP23.19■■□□□ 1.3
SMARCC2-201ENST00000267064 SURF6O75683 361 aaKnown RBP23.19■■□□□ 1.3
SMARCC2-201ENST00000267064 NUTM2AQ8IVF1 878 aaPredicted RBP23.19■■□□□ 1.3
SMARCC2-201ENST00000267064 RPAP2Q8IXW5 612 aaPredicted RBP23.19■■□□□ 1.3
SMARCC2-201ENST00000267064 NUCB1Q02818 461 aa23.19■■□□□ 1.3
SMARCC2-201ENST00000267064 CHMP3Q9Y3E7 222 aa23.19■■□□□ 1.3
SMARCC2-201ENST00000267064 USP19O94966 1318 aa23.19■■□□□ 1.3
SMARCC2-201ENST00000267064 IL1RAPL2Q9NP60 686 aa23.18■■□□□ 1.3
SMARCC2-201ENST00000267064 ABCC4O15439 1325 aa23.18■■□□□ 1.3
SMARCC2-201ENST00000267064 C1orf167Q5SNV9 1468 aa23.18■■□□□ 1.3
SMARCC2-201ENST00000267064 FOXD4L1Q9NU39 408 aa23.18■■□□□ 1.3
SMARCC2-201ENST00000267064 ADGRB2O60241 1585 aa23.17■■□□□ 1.3
SMARCC2-201ENST00000267064 TSHZ3Q63HK5 1081 aa23.17■■□□□ 1.3
SMARCC2-201ENST00000267064 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
SMARCC2-201ENST00000267064 ADAMTS2O95450 1211 aa23.17■■□□□ 1.3
SMARCC2-201ENST00000267064 KNDC1Q76NI1 1749 aa23.16■■□□□ 1.3
SMARCC2-201ENST00000267064 INTS3Q68E01 1043 aaKnown RBP23.16■■□□□ 1.3
SMARCC2-201ENST00000267064 BRINP3Q76B58 766 aa23.16■■□□□ 1.3
SMARCC2-201ENST00000267064 KIAA0232Q92628 1395 aa23.16■■□□□ 1.3
SMARCC2-201ENST00000267064 PRAMEF22A3QJZ6 481 aa23.16■■□□□ 1.3
SMARCC2-201ENST00000267064 RGPD8O14715 1765 aaPredicted RBP23.15■■□□□ 1.3
SMARCC2-201ENST00000267064 DDX58O95786 925 aaKnown RBP23.15■■□□□ 1.3
SMARCC2-201ENST00000267064 ERBB3P21860 1342 aa23.15■■□□□ 1.3
SMARCC2-201ENST00000267064 SRGAP3O43295 1099 aa23.14■■□□□ 1.3
SMARCC2-201ENST00000267064 EIF4A1P60842 406 aaKnown RBP23.14■■□□□ 1.3
SMARCC2-201ENST00000267064 NEXNQ0ZGT2 675 aa23.14■■□□□ 1.3
SMARCC2-201ENST00000267064 CEP85Q6P2H3 762 aa23.14■■□□□ 1.3
SMARCC2-201ENST00000267064 DNAAF4Q8WXU2 420 aa23.14■■□□□ 1.3
SMARCC2-201ENST00000267064 DBF4Q9UBU7 674 aaPredicted RBP23.14■■□□□ 1.3
SMARCC2-201ENST00000267064 HSCBQ8IWL3 235 aa23.14■■□□□ 1.29
SMARCC2-201ENST00000267064 JARID2Q92833 1246 aaPredicted RBP23.14■■□□□ 1.29
SMARCC2-201ENST00000267064 ANKRD44Q8N8A2 993 aa23.13■■□□□ 1.29
SMARCC2-201ENST00000267064 ANKRD26Q9UPS8 1709 aa23.13■■□□□ 1.29
SMARCC2-201ENST00000267064 SIRT2Q8IXJ6 389 aa23.13■■□□□ 1.29
SMARCC2-201ENST00000267064 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
SMARCC2-201ENST00000267064 KDRP35968 1356 aa23.13■■□□□ 1.29
SMARCC2-201ENST00000267064 OTUD7AQ8TE49 926 aaPredicted RBP23.13■■□□□ 1.29
SMARCC2-201ENST00000267064 MAP3K2Q9Y2U5 619 aa23.13■■□□□ 1.29
SMARCC2-201ENST00000267064 KAT6BQ8WYB5 2073 aa23.12■■□□□ 1.29
SMARCC2-201ENST00000267064 KDM4FA0A1W2PPD8 638 aa23.12■■□□□ 1.29
SMARCC2-201ENST00000267064 RTL1A6NKG5 1358 aa23.12■■□□□ 1.29
SMARCC2-201ENST00000267064 BRPF1P55201 1214 aaPredicted RBP23.11■■□□□ 1.29
SMARCC2-201ENST00000267064 KIF24Q5T7B8 1368 aa23.11■■□□□ 1.29
SMARCC2-201ENST00000267064 CRB1P82279 1406 aa23.1■■□□□ 1.29
SMARCC2-201ENST00000267064 MON2Q7Z3U7 1717 aa23.1■■□□□ 1.29
SMARCC2-201ENST00000267064 RBM42Q9BTD8 480 aaKnown RBP23.1■■□□□ 1.29
SMARCC2-201ENST00000267064 MAP4K4O95819 1239 aaPredicted RBP23.09■■□□□ 1.29
SMARCC2-201ENST00000267064 CWF19L2Q2TBE0 894 aaKnown RBP23.08■■□□□ 1.29
SMARCC2-201ENST00000267064 SIL1Q9H173 461 aa23.08■■□□□ 1.29
SMARCC2-201ENST00000267064 LRRCC1Q9C099 1032 aa23.08■■□□□ 1.29
SMARCC2-201ENST00000267064 NUTM1Q86Y26 1132 aa23.07■■□□□ 1.28
SMARCC2-201ENST00000267064 ZCRB1Q8TBF4 217 aaKnown RBP23.07■■□□□ 1.28
SMARCC2-201ENST00000267064 DCTPP1Q9H773 170 aa23.07■■□□□ 1.28
SMARCC2-201ENST00000267064 CDC45O75419 566 aa23.07■■□□□ 1.28
SMARCC2-201ENST00000267064 PROSER3Q2NL68 480 aa23.07■■□□□ 1.28
SMARCC2-201ENST00000267064 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
SMARCC2-201ENST00000267064 PPP1R42Q7Z4L9 355 aa23.06■■□□□ 1.28
SMARCC2-201ENST00000267064 SPATA31A3Q5VYP0 1347 aa23.06■■□□□ 1.28
SMARCC2-201ENST00000267064 PNMA6EA0A0J9YXQ4 647 aa23.05■■□□□ 1.28
SMARCC2-201ENST00000267064 NOL8Q76FK4 1167 aaKnown RBP23.05■■□□□ 1.28
SMARCC2-201ENST00000267064 ZNF496Q96IT1 587 aaPredicted RBP23.05■■□□□ 1.28
SMARCC2-201ENST00000267064 MYD88Q99836 296 aa23.04■■□□□ 1.28
SMARCC2-201ENST00000267064 ATP5J2-PTCD1G3V325 749 aa23.04■■□□□ 1.28
SMARCC2-201ENST00000267064 COPS6Q7L5N1 327 aa23.04■■□□□ 1.28
SMARCC2-201ENST00000267064 BTG4Q9NY30 223 aa23.04■■□□□ 1.28
SMARCC2-201ENST00000267064 NBPF7P0C2Y1 421 aaPredicted RBP23.03■■□□□ 1.28
SMARCC2-201ENST00000267064 PHKG2P15735 406 aa23.03■■□□□ 1.28
SMARCC2-201ENST00000267064 XAGE3Q8WTP9 111 aa23.03■■□□□ 1.28
SMARCC2-201ENST00000267064 AKAP12Q02952 1782 aa23.03■■□□□ 1.28
SMARCC2-201ENST00000267064 GIGYF1O75420 1035 aaPredicted RBP23.03■■□□□ 1.28
SMARCC2-201ENST00000267064 LARP1Q6PKG0 1096 aaKnown RBP23.03■■□□□ 1.28
SMARCC2-201ENST00000267064 TBC1D9Q6ZT07 1266 aa23.02■■□□□ 1.28
SMARCC2-201ENST00000267064 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
SMARCC2-201ENST00000267064 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
SMARCC2-201ENST00000267064 BMP2KLQ5H9B9 411 aa23.01■■□□□ 1.27
SMARCC2-201ENST00000267064 DCAF5Q96JK2 942 aa23.01■■□□□ 1.27
SMARCC2-201ENST00000267064 HYPKQ9NX55 129 aa23.01■■□□□ 1.27
SMARCC2-201ENST00000267064 USP44Q9H0E7 712 aa23■■□□□ 1.27
SMARCC2-201ENST00000267064 XRN1Q8IZH2 1706 aaKnown RBP23■■□□□ 1.27
SMARCC2-201ENST00000267064 PLEKHM2Q8IWE5 1019 aa23■■□□□ 1.27
SMARCC2-201ENST00000267064 HDAC5Q9UQL6 1122 aa23■■□□□ 1.27
SMARCC2-201ENST00000267064 USP16Q9Y5T5 823 aa23■■□□□ 1.27
SMARCC2-201ENST00000267064 PEAK1Q9H792 1746 aa22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 IL2RBP14784 551 aa22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 G3BP1Q13283 466 aaKnown RBP eCLIP22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 SNRPA1P09661 255 aaKnown RBP22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 ANO2Q9NQ90 1003 aa22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 BABAM1Q9NWV8 329 aa22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 PIK3C2AO00443 1686 aa22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 ADAMTSL3P82987 1691 aa22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 TBC1D32Q96NH3 1257 aa22.99■■□□□ 1.27
SMARCC2-201ENST00000267064 IFIT2P09913 472 aaKnown RBP22.98■■□□□ 1.27
SMARCC2-201ENST00000267064 CYP27B1O15528 508 aa22.98■■□□□ 1.27
SMARCC2-201ENST00000267064 ZBTB3Q9H5J0 574 aa22.98■■□□□ 1.27
SMARCC2-201ENST00000267064 ATP8B2P98198 1209 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms