RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-201ENST00000266742 NCLP19338 710 aaKnown RBP10.03□□□□□ -0.8
NEDD1-201ENST00000266742 EXOC6BQ9Y2D4 811 aa10.03□□□□□ -0.8
NEDD1-201ENST00000266742 HOXC9P31274 260 aa10.03□□□□□ -0.8
NEDD1-201ENST00000266742 TOPAZ1Q8N9V7 1692 aa10.02□□□□□ -0.8
NEDD1-201ENST00000266742 PANK2Q9BZ23 570 aa10.02□□□□□ -0.8
NEDD1-201ENST00000266742 ANO8Q9HCE9 1232 aaPredicted RBP10.02□□□□□ -0.8
NEDD1-201ENST00000266742 MAP3K5Q99683 1374 aa10.02□□□□□ -0.81
NEDD1-201ENST00000266742 ANKARQ7Z5J8 1434 aa10.02□□□□□ -0.81
NEDD1-201ENST00000266742 MCTP1Q6DN14 999 aa10.02□□□□□ -0.81
NEDD1-201ENST00000266742 RILPL2Q969X0 211 aa10.02□□□□□ -0.81
NEDD1-201ENST00000266742 LTV1Q96GA3 475 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-201ENST00000266742 ANAPC15P60006 121 aa10.02□□□□□ -0.81
NEDD1-201ENST00000266742 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
NEDD1-201ENST00000266742 NEK4P51957 841 aa10.01□□□□□ -0.81
NEDD1-201ENST00000266742 HDAC5Q9UQL6 1122 aa10.01□□□□□ -0.81
NEDD1-201ENST00000266742 IBTKQ9P2D0 1353 aaPredicted RBP10.01□□□□□ -0.81
NEDD1-201ENST00000266742 RAB11FIP3O75154 756 aa10.01□□□□□ -0.81
NEDD1-201ENST00000266742 NECTIN2Q92692 538 aa10.01□□□□□ -0.81
NEDD1-201ENST00000266742 NALCNQ8IZF0 1738 aa10.01□□□□□ -0.81
NEDD1-201ENST00000266742 ANO2Q9NQ90 1003 aa10.01□□□□□ -0.81
NEDD1-201ENST00000266742 EPB41L2O43491 1005 aaKnown RBP10□□□□□ -0.81
NEDD1-201ENST00000266742 HSP90AB4PQ58FF6 505 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 ESYT1Q9BSJ8 1104 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 RGPD1P0DJD0 1748 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 AOX1Q06278 1338 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 CLCN1P35523 988 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 CCDC173Q0VFZ6 552 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 NUTM2GQ5VZR2 741 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
NEDD1-201ENST00000266742 SLIT1O75093 1534 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 PEAK1Q9H792 1746 aa10□□□□□ -0.81
NEDD1-201ENST00000266742 NASPP49321 788 aaPredicted RBP10□□□□□ -0.81
NEDD1-201ENST00000266742 LRRFIP2Q9Y608 721 aaKnown RBP10□□□□□ -0.81
NEDD1-201ENST00000266742 RRAGDQ9NQL2 400 aaPredicted RBP9.99□□□□□ -0.81
NEDD1-201ENST00000266742 ARHGAP23Q9P227 1491 aa9.99□□□□□ -0.81
NEDD1-201ENST00000266742 DIP2AQ14689 1571 aa9.99□□□□□ -0.81
NEDD1-201ENST00000266742 HOXB7P09629 217 aa9.99□□□□□ -0.81
NEDD1-201ENST00000266742 IL17REQ8NFR9 667 aa9.99□□□□□ -0.81
NEDD1-201ENST00000266742 STAP2Q9UGK3 403 aa9.99□□□□□ -0.81
NEDD1-201ENST00000266742 KCNH5Q8NCM2 988 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 ESPNB1AK53 854 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 SURF6O75683 361 aaKnown RBP9.98□□□□□ -0.81
NEDD1-201ENST00000266742 TEFQ10587 303 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 PHF8Q9UPP1 1060 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 PNMA6EA0A0J9YXQ4 647 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 MBD3O95983 291 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 CYP2E1P05181 493 aaPredicted RBP9.98□□□□□ -0.81
NEDD1-201ENST00000266742 KCNA6P17658 529 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 CHMLP26374 656 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 CAVIN1Q6NZI2 390 aaKnown RBP9.98□□□□□ -0.81
NEDD1-201ENST00000266742 KIAA1211Q6ZU35 1233 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 KIF1BPQ96EK5 621 aa9.98□□□□□ -0.81
NEDD1-201ENST00000266742 PXDNLA1KZ92 1463 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 PRPF40AO75400 957 aaKnown RBP9.97□□□□□ -0.81
NEDD1-201ENST00000266742 EIF2S2P20042 333 aaKnown RBP9.97□□□□□ -0.81
NEDD1-201ENST00000266742 INTS4Q96HW7 963 aaKnown RBP9.97□□□□□ -0.81
NEDD1-201ENST00000266742 TMX3Q96JJ7 454 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 CEP170BQ9Y4F5 1589 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-201ENST00000266742 ZNF445P59923 1031 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 SYAP1Q96A49 352 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-201ENST00000266742 USP44Q9H0E7 712 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 PSME1Q06323 249 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 OS9Q13438 667 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-201ENST00000266742 PLEKHO1Q53GL0 409 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-201ENST00000266742 GAS2L3Q86XJ1 694 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 CNTROBQ8N137 903 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 SSH3Q8TE77 659 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 IP6K1Q92551 441 aa9.97□□□□□ -0.81
NEDD1-201ENST00000266742 NAP1L5Q96NT1 182 aaPredicted RBP9.97□□□□□ -0.81
NEDD1-201ENST00000266742 ZGPATQ8N5A5 531 aaKnown RBP9.96□□□□□ -0.81
NEDD1-201ENST00000266742 LMBRD1Q9NUN5 540 aa9.96□□□□□ -0.81
NEDD1-201ENST00000266742 SRGAP3O43295 1099 aa9.96□□□□□ -0.82
NEDD1-201ENST00000266742 PPP1R42Q7Z4L9 355 aa9.96□□□□□ -0.82
NEDD1-201ENST00000266742 GPATCH3Q96I76 525 aa9.96□□□□□ -0.82
NEDD1-201ENST00000266742 FMN2Q9NZ56 1722 aa9.96□□□□□ -0.82
NEDD1-201ENST00000266742 SALL3Q9BXA9 1300 aa9.96□□□□□ -0.82
NEDD1-201ENST00000266742 KIF13AQ9H1H9 1805 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 ZBTB7CA1YPR0 619 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 AMOTQ4VCS5 1084 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 C1orf141Q5JVX7 400 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 TSHZ3Q63HK5 1081 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 DNAAF4Q8WXU2 420 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 RUFY2Q8WXA3 655 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 IL1RAPL2Q9NP60 686 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 MSNP26038 577 aaKnown RBP9.95□□□□□ -0.82
NEDD1-201ENST00000266742 ZSCAN23Q3MJ62 389 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 RHPN1Q8TCX5 695 aa9.95□□□□□ -0.82
NEDD1-201ENST00000266742 ANKLE2Q86XL3 938 aa9.94□□□□□ -0.82
NEDD1-201ENST00000266742 BTBD11A6QL63 1104 aa9.94□□□□□ -0.82
NEDD1-201ENST00000266742 AKAP4Q5JQC9 854 aa9.94□□□□□ -0.82
NEDD1-201ENST00000266742 USHBP1Q8N6Y0 703 aa9.94□□□□□ -0.82
NEDD1-201ENST00000266742 PHF14O94880 888 aa9.94□□□□□ -0.82
NEDD1-201ENST00000266742 EIF4A1P60842 406 aaKnown RBP9.94□□□□□ -0.82
NEDD1-201ENST00000266742 CUL4AQ13619 759 aa9.94□□□□□ -0.82
NEDD1-201ENST00000266742 CLASRPQ8N2M8 674 aaKnown RBP9.94□□□□□ -0.82
NEDD1-201ENST00000266742 PHAXQ9H814 394 aaKnown RBP9.94□□□□□ -0.82
NEDD1-201ENST00000266742 DBF4Q9UBU7 674 aaPredicted RBP9.94□□□□□ -0.82
NEDD1-201ENST00000266742 ZNF530Q6P9A1 599 aaPredicted RBP9.93□□□□□ -0.82
NEDD1-201ENST00000266742 NUTM1Q86Y26 1132 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms