RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 SBF2Q86WG5 1849 aa21.66■■□□□ 1.06
SNRPF-201ENST00000266735 EN1Q05925 392 aaPredicted RBP21.65■■□□□ 1.06
SNRPF-201ENST00000266735 SMARCC1Q92922 1105 aaPredicted RBP21.65■■□□□ 1.06
SNRPF-201ENST00000266735 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.06
SNRPF-201ENST00000266735 CAMKK2Q96RR4 588 aa21.63■■□□□ 1.05
SNRPF-201ENST00000266735 TRIM35Q9UPQ4 493 aa21.63■■□□□ 1.05
SNRPF-201ENST00000266735 PALLDQ8WX93 1383 aa21.62■■□□□ 1.05
SNRPF-201ENST00000266735 ATG3Q9NT62 314 aa21.62■■□□□ 1.05
SNRPF-201ENST00000266735 EZH2Q15910 746 aaKnown RBP21.61■■□□□ 1.05
SNRPF-201ENST00000266735 THUMPD2Q9BTF0 503 aaKnown RBP21.61■■□□□ 1.05
SNRPF-201ENST00000266735 ASAP1Q9ULH1 1129 aa21.61■■□□□ 1.05
SNRPF-201ENST00000266735 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
SNRPF-201ENST00000266735 CCDC27Q2M243 656 aa21.61■■□□□ 1.05
SNRPF-201ENST00000266735 NGEFQ8N5V2 710 aa21.61■■□□□ 1.05
SNRPF-201ENST00000266735 BTBD11A6QL63 1104 aa21.6■■□□□ 1.05
SNRPF-201ENST00000266735 TAF7Q15545 349 aaPredicted RBP21.6■■□□□ 1.05
SNRPF-201ENST00000266735 TXNRD1Q16881 649 aa21.6■■□□□ 1.05
SNRPF-201ENST00000266735 BTAF1O14981 1849 aa21.59■■□□□ 1.05
SNRPF-201ENST00000266735 SLC27A3Q5K4L6 730 aa21.59■■□□□ 1.05
SNRPF-201ENST00000266735 CALD1Q05682 793 aaKnown RBP21.58■■□□□ 1.04
SNRPF-201ENST00000266735 PROM2Q8N271 834 aa21.58■■□□□ 1.04
SNRPF-201ENST00000266735 SLC39A6Q13433 755 aa21.57■■□□□ 1.04
SNRPF-201ENST00000266735 ZNF790Q6PG37 636 aa21.57■■□□□ 1.04
SNRPF-201ENST00000266735 TTC5Q8N0Z6 440 aa21.57■■□□□ 1.04
SNRPF-201ENST00000266735 ITGB4P16144 1822 aa21.57■■□□□ 1.04
SNRPF-201ENST00000266735 LOC102724428A0A0B4J2F2 783 aa21.56■■□□□ 1.04
SNRPF-201ENST00000266735 SIK1P57059 783 aa21.56■■□□□ 1.04
SNRPF-201ENST00000266735 BABAM1Q9NWV8 329 aa21.56■■□□□ 1.04
SNRPF-201ENST00000266735 CCNL1Q9UK58 526 aaPredicted RBP21.56■■□□□ 1.04
SNRPF-201ENST00000266735 RGPD3A6NKT7 1758 aaPredicted RBP21.55■■□□□ 1.04
SNRPF-201ENST00000266735 RGPD4Q7Z3J3 1758 aa21.55■■□□□ 1.04
SNRPF-201ENST00000266735 SENP3-EIF4A1A0A087X0R7 540 aa21.55■■□□□ 1.04
SNRPF-201ENST00000266735 HMGB2P26583 209 aaKnown RBP21.55■■□□□ 1.04
SNRPF-201ENST00000266735 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
SNRPF-201ENST00000266735 RBM42Q9BTD8 480 aaKnown RBP21.54■■□□□ 1.04
SNRPF-201ENST00000266735 PTCD1O75127 700 aaKnown RBP21.53■■□□□ 1.04
SNRPF-201ENST00000266735 SALL2Q9Y467 1007 aaPredicted RBP21.53■■□□□ 1.04
SNRPF-201ENST00000266735 LRRC4BQ9NT99 713 aa21.52■■□□□ 1.04
SNRPF-201ENST00000266735 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
SNRPF-201ENST00000266735 ATP6V1AP38606 617 aa21.51■■□□□ 1.03
SNRPF-201ENST00000266735 CFAP44Q96MT7 982 aa21.51■■□□□ 1.03
SNRPF-201ENST00000266735 MIS18AQ9NYP9 233 aa21.51■■□□□ 1.03
SNRPF-201ENST00000266735 TSPYL4Q9UJ04 414 aa21.51■■□□□ 1.03
SNRPF-201ENST00000266735 PAPPAQ13219 1627 aa21.51■■□□□ 1.03
SNRPF-201ENST00000266735 KCNQ3O43525 872 aa21.5■■□□□ 1.03
SNRPF-201ENST00000266735 VSIG10Q8N0Z9 540 aa21.5■■□□□ 1.03
SNRPF-201ENST00000266735 FMNL2Q96PY5 1086 aa21.5■■□□□ 1.03
SNRPF-201ENST00000266735 IFT57Q9NWB7 429 aa21.5■■□□□ 1.03
SNRPF-201ENST00000266735 KCPQ6ZWJ8 1503 aa21.5■■□□□ 1.03
SNRPF-201ENST00000266735 CHL1O00533 1208 aa21.49■■□□□ 1.03
SNRPF-201ENST00000266735 WDR63Q8IWG1 891 aa21.49■■□□□ 1.03
SNRPF-201ENST00000266735 ZNF496Q96IT1 587 aaPredicted RBP21.49■■□□□ 1.03
SNRPF-201ENST00000266735 SLC4A9Q96Q91 983 aa21.49■■□□□ 1.03
SNRPF-201ENST00000266735 LAS1LQ9Y4W2 734 aaKnown RBP21.49■■□□□ 1.03
SNRPF-201ENST00000266735 SIPA1L3O60292 1781 aaPredicted RBP21.49■■□□□ 1.03
SNRPF-201ENST00000266735 IL16Q14005 1332 aa21.49■■□□□ 1.03
SNRPF-201ENST00000266735 KCNQ4P56696 695 aa21.48■■□□□ 1.03
SNRPF-201ENST00000266735 GNAI1P63096 354 aa21.48■■□□□ 1.03
SNRPF-201ENST00000266735 LY75O60449 1722 aa21.48■■□□□ 1.03
SNRPF-201ENST00000266735 HEG1Q9ULI3 1381 aa21.48■■□□□ 1.03
SNRPF-201ENST00000266735 ZNF853P0CG23 659 aa21.48■■□□□ 1.03
SNRPF-201ENST00000266735 NBPF14Q5TI25 921 aa21.48■■□□□ 1.03
SNRPF-201ENST00000266735 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
SNRPF-201ENST00000266735 ITPK1Q13572 414 aa21.47■■□□□ 1.03
SNRPF-201ENST00000266735 RREB1Q92766 1687 aa21.46■■□□□ 1.03
SNRPF-201ENST00000266735 ZNF521Q96K83 1311 aa21.46■■□□□ 1.03
SNRPF-201ENST00000266735 EIF4A1P60842 406 aaKnown RBP21.46■■□□□ 1.03
SNRPF-201ENST00000266735 VIRMAQ69YN4 1812 aaKnown RBP21.46■■□□□ 1.03
SNRPF-201ENST00000266735 LINC00116Q8NCU8 138 aa21.45■■□□□ 1.02
SNRPF-201ENST00000266735 TEX13AQ9BXU3 409 aaPredicted RBP21.45■■□□□ 1.02
SNRPF-201ENST00000266735 MBIPQ9NS73 344 aa21.45■■□□□ 1.02
SNRPF-201ENST00000266735 SNRPA1P09661 255 aaKnown RBP21.44■■□□□ 1.02
SNRPF-201ENST00000266735 DNAJC10Q8IXB1 793 aa21.44■■□□□ 1.02
SNRPF-201ENST00000266735 STK32BQ9NY57 414 aa21.44■■□□□ 1.02
SNRPF-201ENST00000266735 ANO8Q9HCE9 1232 aaPredicted RBP21.43■■□□□ 1.02
SNRPF-201ENST00000266735 ZNF831Q5JPB2 1677 aa21.42■■□□□ 1.02
SNRPF-201ENST00000266735 HNRNPUQ00839 825 aaKnown RBP eCLIP21.42■■□□□ 1.02
SNRPF-201ENST00000266735 SLC15A2Q16348 729 aa21.42■■□□□ 1.02
SNRPF-201ENST00000266735 AKT1S1Q96B36 256 aa21.42■■□□□ 1.02
SNRPF-201ENST00000266735 NUP188Q5SRE5 1749 aa21.42■■□□□ 1.02
SNRPF-201ENST00000266735 CNTNAP4Q9C0A0 1308 aa21.41■■□□□ 1.02
SNRPF-201ENST00000266735 UBR2Q8IWV8 1755 aa21.41■■□□□ 1.02
SNRPF-201ENST00000266735 GIGYF1O75420 1035 aaPredicted RBP21.41■■□□□ 1.02
SNRPF-201ENST00000266735 STARD3NLO95772 234 aa21.41■■□□□ 1.02
SNRPF-201ENST00000266735 ZNF827Q17R98 1081 aa21.41■■□□□ 1.02
SNRPF-201ENST00000266735 CYP19A1P11511 503 aaPredicted RBP21.4■■□□□ 1.02
SNRPF-201ENST00000266735 RC3H1Q5TC82 1133 aaKnown RBP21.4■■□□□ 1.02
SNRPF-201ENST00000266735 AK7Q96M32 723 aa21.4■■□□□ 1.02
SNRPF-201ENST00000266735 KDM3BQ7LBC6 1761 aa21.4■■□□□ 1.02
SNRPF-201ENST00000266735 CICQ96RK0 1608 aaPredicted RBP21.4■■□□□ 1.02
SNRPF-201ENST00000266735 GOLGA2Q08379 1002 aa21.39■■□□□ 1.02
SNRPF-201ENST00000266735 MYH16Q9H6N6 1097 aa21.39■■□□□ 1.02
SNRPF-201ENST00000266735 CRKLP46109 303 aaKnown RBP21.38■■□□□ 1.01
SNRPF-201ENST00000266735 TSR2Q969E8 191 aaKnown RBP21.38■■□□□ 1.01
SNRPF-201ENST00000266735 PRAMEF22A3QJZ6 481 aa21.37■■□□□ 1.01
SNRPF-201ENST00000266735 TFCP2L1Q9NZI6 479 aa21.37■■□□□ 1.01
SNRPF-201ENST00000266735 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
SNRPF-201ENST00000266735 C5P01031 1676 aa21.37■■□□□ 1.01
SNRPF-201ENST00000266735 FANCIQ9NVI1 1328 aa21.37■■□□□ 1.01
SNRPF-201ENST00000266735 E9PSI1 815 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms