RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 ITPK1Q13572 414 aa11.21□□□□□ -0.61
ERCC8-201ENST00000265038 ATP6V1AP38606 617 aa11.21□□□□□ -0.62
ERCC8-201ENST00000265038 PAPPAQ13219 1627 aa11.2□□□□□ -0.62
ERCC8-201ENST00000265038 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
ERCC8-201ENST00000265038 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
ERCC8-201ENST00000265038 PNPLA7Q6ZV29 1317 aa11.2□□□□□ -0.62
ERCC8-201ENST00000265038 SLC39A6Q13433 755 aa11.19□□□□□ -0.62
ERCC8-201ENST00000265038 TFCP2L1Q9NZI6 479 aa11.19□□□□□ -0.62
ERCC8-201ENST00000265038 CEMIPQ8WUJ3 1361 aa11.19□□□□□ -0.62
ERCC8-201ENST00000265038 PTCD1O75127 700 aaKnown RBP11.19□□□□□ -0.62
ERCC8-201ENST00000265038 CCDC184Q52MB2 194 aa11.19□□□□□ -0.62
ERCC8-201ENST00000265038 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
ERCC8-201ENST00000265038 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 MRC1P22897 1456 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 HTATSF1O43719 755 aaKnown RBP11.18□□□□□ -0.62
ERCC8-201ENST00000265038 ZBTB7AO95365 584 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 DCTN1Q14203 1278 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 MCM10Q7L590 875 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 AMIGO3Q86WK7 504 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 ADAMTS8Q9UP79 889 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 LY75O60449 1722 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 ITGB4P16144 1822 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 NEFMP07197 916 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 HMGB2P26583 209 aaKnown RBP11.18□□□□□ -0.62
ERCC8-201ENST00000265038 TEFQ10587 303 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 NFE2L2Q16236 605 aa11.18□□□□□ -0.62
ERCC8-201ENST00000265038 ANP32CO43423 234 aa11.17□□□□□ -0.62
ERCC8-201ENST00000265038 WDR43Q15061 677 aaKnown RBP eCLIP11.17□□□□□ -0.62
ERCC8-201ENST00000265038 SMIM5Q71RC9 77 aa11.17□□□□□ -0.62
ERCC8-201ENST00000265038 COL23A1Q86Y22 540 aaPredicted RBP11.17□□□□□ -0.62
ERCC8-201ENST00000265038 RTF1Q92541 710 aaKnown RBP11.17□□□□□ -0.62
ERCC8-201ENST00000265038 SPON1Q9HCB6 807 aa11.17□□□□□ -0.62
ERCC8-201ENST00000265038 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
ERCC8-201ENST00000265038 AK7Q96M32 723 aa11.16□□□□□ -0.62
ERCC8-201ENST00000265038 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-201ENST00000265038 ADAMTS7Q9UKP4 1686 aa11.16□□□□□ -0.62
ERCC8-201ENST00000265038 MAPK8IP3Q9UPT6 1336 aa11.16□□□□□ -0.62
ERCC8-201ENST00000265038 MTFR1LQ9H019 292 aa11.16□□□□□ -0.62
ERCC8-201ENST00000265038 KCNQ3O43525 872 aa11.15□□□□□ -0.62
ERCC8-201ENST00000265038 PTGER2P43116 358 aa11.15□□□□□ -0.62
ERCC8-201ENST00000265038 ZNF790Q6PG37 636 aa11.15□□□□□ -0.62
ERCC8-201ENST00000265038 BTBD11A6QL63 1104 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
ERCC8-201ENST00000265038 RC3H1Q5TC82 1133 aaKnown RBP11.14□□□□□ -0.63
ERCC8-201ENST00000265038 DNAJC10Q8IXB1 793 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 SLC16A10Q8TF71 515 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 RUNDC1Q96C34 613 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 GNPATO15228 680 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 PHF14O94880 888 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 RIPK4P57078 832 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 FLAD1Q8NFF5 587 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 ZNF496Q96IT1 587 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-201ENST00000265038 THUMPD2Q9BTF0 503 aaKnown RBP11.14□□□□□ -0.63
ERCC8-201ENST00000265038 CNTNAP4Q9C0A0 1308 aa11.14□□□□□ -0.63
ERCC8-201ENST00000265038 SCN11AQ9UI33 1791 aa11.13□□□□□ -0.63
ERCC8-201ENST00000265038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
ERCC8-201ENST00000265038 MSH5O43196 834 aa11.13□□□□□ -0.63
ERCC8-201ENST00000265038 SSFA2P28290 1259 aa11.13□□□□□ -0.63
ERCC8-201ENST00000265038 TTC5Q8N0Z6 440 aa11.13□□□□□ -0.63
ERCC8-201ENST00000265038 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
ERCC8-201ENST00000265038 RRP7AQ9Y3A4 280 aaKnown RBP11.13□□□□□ -0.63
ERCC8-201ENST00000265038 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
ERCC8-201ENST00000265038 RPS6KA4O75676 772 aa11.13□□□□□ -0.63
ERCC8-201ENST00000265038 CRKLP46109 303 aaKnown RBP11.13□□□□□ -0.63
ERCC8-201ENST00000265038 TAF7Q15545 349 aaPredicted RBP11.13□□□□□ -0.63
ERCC8-201ENST00000265038 INTS5Q6P9B9 1019 aaKnown RBP11.13□□□□□ -0.63
ERCC8-201ENST00000265038 KCPQ6ZWJ8 1503 aa11.12□□□□□ -0.63
ERCC8-201ENST00000265038 CYP19A1P11511 503 aaPredicted RBP11.12□□□□□ -0.63
ERCC8-201ENST00000265038 PNISRQ8TF01 805 aaKnown RBP11.12□□□□□ -0.63
ERCC8-201ENST00000265038 MIS18AQ9NYP9 233 aa11.12□□□□□ -0.63
ERCC8-201ENST00000265038 RTCBQ9Y3I0 505 aaKnown RBP11.12□□□□□ -0.63
ERCC8-201ENST00000265038 LRP5O75197 1615 aa11.12□□□□□ -0.63
ERCC8-201ENST00000265038 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
ERCC8-201ENST00000265038 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
ERCC8-201ENST00000265038 MRS2Q9HD23 443 aa11.11□□□□□ -0.63
ERCC8-201ENST00000265038 HEG1Q9ULI3 1381 aa11.11□□□□□ -0.63
ERCC8-201ENST00000265038 C5P01031 1676 aa11.11□□□□□ -0.63
ERCC8-201ENST00000265038 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
ERCC8-201ENST00000265038 FMNL2Q96PY5 1086 aa11.11□□□□□ -0.63
ERCC8-201ENST00000265038 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
ERCC8-201ENST00000265038 TRAPPC3LQ5T215 181 aa11.1□□□□□ -0.63
ERCC8-201ENST00000265038 MSL1Q68DK7 614 aa11.1□□□□□ -0.63
ERCC8-201ENST00000265038 APAF1O14727 1248 aa11.09□□□□□ -0.63
ERCC8-201ENST00000265038 CCDC87Q9NVE4 849 aa11.09□□□□□ -0.63
ERCC8-201ENST00000265038 PPP1R1BQ9UD71 204 aaPredicted RBP11.09□□□□□ -0.63
ERCC8-201ENST00000265038 ZNF831Q5JPB2 1677 aa11.09□□□□□ -0.63
ERCC8-201ENST00000265038 PRAMEF22A3QJZ6 481 aa11.09□□□□□ -0.63
ERCC8-201ENST00000265038 LMOD3Q0VAK6 560 aa11.09□□□□□ -0.63
ERCC8-201ENST00000265038 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
ERCC8-201ENST00000265038 SRCAPQ6ZRS2 3230 aa11.08□□□□□ -0.63
ERCC8-201ENST00000265038 STARD3NLO95772 234 aa11.08□□□□□ -0.64
ERCC8-201ENST00000265038 ARXQ96QS3 562 aa11.08□□□□□ -0.64
ERCC8-201ENST00000265038 TEX13AQ9BXU3 409 aaPredicted RBP11.08□□□□□ -0.64
ERCC8-201ENST00000265038 USP16Q9Y5T5 823 aa11.08□□□□□ -0.64
ERCC8-201ENST00000265038 TAF1LQ8IZX4 1826 aa11.08□□□□□ -0.64
ERCC8-201ENST00000265038 SNRPA1P09661 255 aaKnown RBP11.08□□□□□ -0.64
ERCC8-201ENST00000265038 POLD1P28340 1107 aa11.08□□□□□ -0.64
ERCC8-201ENST00000265038 SOS1Q07889 1333 aaPredicted RBP11.07□□□□□ -0.64
ERCC8-201ENST00000265038 A1BGP04217 495 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms