RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 CHMP3Q9Y3E7 222 aa10.03□□□□□ -0.8
LDB3-201ENST00000263066 IQGAP1P46940 1657 aa10.02□□□□□ -0.8
LDB3-201ENST00000263066 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.8
LDB3-201ENST00000263066 PHF14O94880 888 aa10.02□□□□□ -0.81
LDB3-201ENST00000263066 TSR2Q969E8 191 aaKnown RBP10.02□□□□□ -0.81
LDB3-201ENST00000263066 PDZRN3Q9UPQ7 1066 aa10.02□□□□□ -0.81
LDB3-201ENST00000263066 TBX22Q9Y458 520 aa10.02□□□□□ -0.81
LDB3-201ENST00000263066 PIK3C2BO00750 1634 aa10.02□□□□□ -0.81
LDB3-201ENST00000263066 MADDQ8WXG6 1647 aa10.02□□□□□ -0.81
LDB3-201ENST00000263066 TPD52L1Q16890 204 aaPredicted RBP10.02□□□□□ -0.81
LDB3-201ENST00000263066 NOL8Q76FK4 1167 aaKnown RBP10.02□□□□□ -0.81
LDB3-201ENST00000263066 CTR9Q6PD62 1173 aa10.02□□□□□ -0.81
LDB3-201ENST00000263066 TCP11L2Q8N4U5 519 aa10.02□□□□□ -0.81
LDB3-201ENST00000263066 CIZ1Q9ULV3 898 aaPredicted RBP10.01□□□□□ -0.81
LDB3-201ENST00000263066 PRR29P0C7W0 189 aa10.01□□□□□ -0.81
LDB3-201ENST00000263066 IBSPP21815 317 aaPredicted RBP10.01□□□□□ -0.81
LDB3-201ENST00000263066 SETQ01105 290 aaPredicted RBP10.01□□□□□ -0.81
LDB3-201ENST00000263066 ZNF692Q9BU19 519 aaPredicted RBP10.01□□□□□ -0.81
LDB3-201ENST00000263066 EFCC1Q9HA90 598 aa10.01□□□□□ -0.81
LDB3-201ENST00000263066 TMEM94Q12767 1356 aa10.01□□□□□ -0.81
LDB3-201ENST00000263066 IGHDP01880 384 aa10.01□□□□□ -0.81
LDB3-201ENST00000263066 CCDC191Q8NCU4 936 aa10.01□□□□□ -0.81
LDB3-201ENST00000263066 TESK2Q96S53 571 aa10.01□□□□□ -0.81
LDB3-201ENST00000263066 DIP2BQ9P265 1576 aa10□□□□□ -0.81
LDB3-201ENST00000263066 NUCB2P80303 420 aa10□□□□□ -0.81
LDB3-201ENST00000263066 MCM10Q7L590 875 aa10□□□□□ -0.81
LDB3-201ENST00000263066 ACSBG1Q96GR2 724 aa10□□□□□ -0.81
LDB3-201ENST00000263066 CARD14Q9BXL6 1004 aa10□□□□□ -0.81
LDB3-201ENST00000263066 FYB1O15117 783 aa10□□□□□ -0.81
LDB3-201ENST00000263066 BCAR3O75815 825 aa10□□□□□ -0.81
LDB3-201ENST00000263066 BAG4O95429 457 aaKnown RBP10□□□□□ -0.81
LDB3-201ENST00000263066 HSP90AB3PQ58FF7 597 aa10□□□□□ -0.81
LDB3-201ENST00000263066 SETD1AO15047 1707 aaKnown RBP10□□□□□ -0.81
LDB3-201ENST00000263066 MLH3Q9UHC1 1453 aa10□□□□□ -0.81
LDB3-201ENST00000263066 EIF2AK4Q9P2K8 1649 aaKnown RBP10□□□□□ -0.81
LDB3-201ENST00000263066 E2F4Q16254 413 aa10□□□□□ -0.81
LDB3-201ENST00000263066 ZNF530Q6P9A1 599 aaPredicted RBP10□□□□□ -0.81
LDB3-201ENST00000263066 MPRIPQ6WCQ1 1025 aa10□□□□□ -0.81
LDB3-201ENST00000263066 GTF3C6Q969F1 213 aa9.99□□□□□ -0.81
LDB3-201ENST00000263066 FAM83GA6ND36 823 aa9.99□□□□□ -0.81
LDB3-201ENST00000263066 HNRNPH2P55795 449 aaKnown RBP9.99□□□□□ -0.81
LDB3-201ENST00000263066 SART3Q15020 963 aaKnown RBP9.99□□□□□ -0.81
LDB3-201ENST00000263066 LEKR1Q6ZMV7 388 aa9.99□□□□□ -0.81
LDB3-201ENST00000263066 KRBA2Q6ZNG9 492 aa9.99□□□□□ -0.81
LDB3-201ENST00000263066 KIF16BQ96L93 1317 aa9.99□□□□□ -0.81
LDB3-201ENST00000263066 GNL2Q13823 731 aaKnown RBP9.98□□□□□ -0.81
LDB3-201ENST00000263066 CT47A1Q5JQC4 288 aaPredicted RBP9.98□□□□□ -0.81
LDB3-201ENST00000263066 TTC5Q8N0Z6 440 aa9.98□□□□□ -0.81
LDB3-201ENST00000263066 ZNF710Q8N1W2 664 aa9.98□□□□□ -0.81
LDB3-201ENST00000263066 TERF2Q15554 542 aa9.98□□□□□ -0.81
LDB3-201ENST00000263066 GEMIN8Q9NWZ8 242 aaKnown RBP9.98□□□□□ -0.81
LDB3-201ENST00000263066 TTC31Q49AM3 519 aaPredicted RBP9.98□□□□□ -0.81
LDB3-201ENST00000263066 LAMC1P11047 1609 aa9.98□□□□□ -0.81
LDB3-201ENST00000263066 SYNMO15061 1565 aa9.98□□□□□ -0.81
LDB3-201ENST00000263066 PIP4K2AP48426 406 aaPredicted RBP9.97□□□□□ -0.81
LDB3-201ENST00000263066 MNAT1P51948 309 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 FAM212AQ96EL1 285 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 TSPYL4Q9UJ04 414 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 DIP2CQ9Y2E4 1556 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 PRAG1Q86YV5 1406 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 TET3O43151 1660 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 TPM4P67936 248 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 GORABQ5T7V8 394 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 ICE2Q659A1 982 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.97□□□□□ -0.81
LDB3-201ENST00000263066 CEP83Q9Y592 693 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 PPLO60437 1756 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 SSR1P43307 286 aaKnown RBP9.97□□□□□ -0.81
LDB3-201ENST00000263066 ITPRIPQ8IWB1 547 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 NEK11Q8NG66 645 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 AK7Q96M32 723 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 BTG4Q9NY30 223 aa9.97□□□□□ -0.81
LDB3-201ENST00000263066 YTHDC2Q9H6S0 1430 aaKnown RBP9.97□□□□□ -0.81
LDB3-201ENST00000263066 ATAD2Q6PL18 1390 aa9.96□□□□□ -0.81
LDB3-201ENST00000263066 TTC21BQ7Z4L5 1316 aa9.96□□□□□ -0.81
LDB3-201ENST00000263066 KDM2BQ8NHM5 1336 aa9.96□□□□□ -0.81
LDB3-201ENST00000263066 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.81
LDB3-201ENST00000263066 ADCY5O95622 1261 aa9.96□□□□□ -0.81
LDB3-201ENST00000263066 CCDC91Q7Z6B0 441 aa9.96□□□□□ -0.81
LDB3-201ENST00000263066 CCAR2Q8N163 923 aaKnown RBP9.96□□□□□ -0.81
LDB3-201ENST00000263066 FEZ2Q9UHY8 353 aaPredicted RBP9.96□□□□□ -0.81
LDB3-201ENST00000263066 LRRFIP2Q9Y608 721 aaKnown RBP9.96□□□□□ -0.81
LDB3-201ENST00000263066 PPP2R5AQ15172 486 aa9.96□□□□□ -0.82
LDB3-201ENST00000263066 PIBF1Q8WXW3 757 aa9.96□□□□□ -0.82
LDB3-201ENST00000263066 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
LDB3-201ENST00000263066 GCP02774 474 aa9.96□□□□□ -0.82
LDB3-201ENST00000263066 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
LDB3-201ENST00000263066 RAD51AP2Q09MP3 1159 aa9.96□□□□□ -0.82
LDB3-201ENST00000263066 GIMAP7Q8NHV1 300 aa9.96□□□□□ -0.82
LDB3-201ENST00000263066 ARGLU1Q9NWB6 273 aaPredicted RBP9.96□□□□□ -0.82
LDB3-201ENST00000263066 TATP17735 454 aaPredicted RBP9.95□□□□□ -0.82
LDB3-201ENST00000263066 LRCH2Q5VUJ6 765 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 NCAPGQ9BPX3 1015 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 STK31Q9BXU1 1019 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 HECW2Q9P2P5 1572 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 PPIP5K1Q6PFW1 1433 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 NPHP3Q7Z494 1330 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 CCDC172P0C7W6 258 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 LMAN1P49257 510 aa9.95□□□□□ -0.82
LDB3-201ENST00000263066 GYS2P54840 703 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms