RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 ZNF853P0CG23 659 aa31.81■■■□□ 2.68
SCN1B-201ENST00000262631 TAF7Q15545 349 aaPredicted RBP31.81■■■□□ 2.68
SCN1B-201ENST00000262631 KCNQ2O43526 872 aa31.8■■■□□ 2.68
SCN1B-201ENST00000262631 SYTL4Q96C24 671 aaPredicted RBP31.8■■■□□ 2.68
SCN1B-201ENST00000262631 IFT57Q9NWB7 429 aa31.8■■■□□ 2.68
SCN1B-201ENST00000262631 CFAP44Q96MT7 982 aa31.8■■■□□ 2.68
SCN1B-201ENST00000262631 SLFN5Q08AF3 891 aa31.78■■■□□ 2.68
SCN1B-201ENST00000262631 PTF1AQ7RTS3 328 aa31.78■■■□□ 2.68
SCN1B-201ENST00000262631 PIGBQ92521 554 aa31.78■■■□□ 2.68
SCN1B-201ENST00000262631 TMOD3Q9NYL9 352 aa31.78■■■□□ 2.68
SCN1B-201ENST00000262631 SIPA1L3O60292 1781 aaPredicted RBP31.77■■■□□ 2.68
SCN1B-201ENST00000262631 CHL1O00533 1208 aa31.77■■■□□ 2.68
SCN1B-201ENST00000262631 TSR2Q969E8 191 aaKnown RBP31.77■■■□□ 2.68
SCN1B-201ENST00000262631 FAM196AQ6ZSG2 479 aa31.76■■■□□ 2.68
SCN1B-201ENST00000262631 BTBD11A6QL63 1104 aa31.76■■■□□ 2.67
SCN1B-201ENST00000262631 E9PSI1 815 aa31.76■■■□□ 2.67
SCN1B-201ENST00000262631 GNAI1P63096 354 aa31.76■■■□□ 2.67
SCN1B-201ENST00000262631 MBIPQ9NS73 344 aa31.76■■■□□ 2.67
SCN1B-201ENST00000262631 ITGB4P16144 1822 aa31.74■■■□□ 2.67
SCN1B-201ENST00000262631 SLC39A6Q13433 755 aa31.74■■■□□ 2.67
SCN1B-201ENST00000262631 TSPYL4Q9UJ04 414 aa31.74■■■□□ 2.67
SCN1B-201ENST00000262631 KCNQ3O43525 872 aa31.73■■■□□ 2.67
SCN1B-201ENST00000262631 FANCIQ9NVI1 1328 aa31.73■■■□□ 2.67
SCN1B-201ENST00000262631 TRMT2AQ8IZ69 625 aaKnown RBP31.73■■■□□ 2.67
SCN1B-201ENST00000262631 DUSP27Q5VZP5 1158 aa31.71■■■□□ 2.67
SCN1B-201ENST00000262631 MYH16Q9H6N6 1097 aa31.71■■■□□ 2.67
SCN1B-201ENST00000262631 KAT6BQ8WYB5 2073 aa31.7■■■□□ 2.67
SCN1B-201ENST00000262631 BABAM1Q9NWV8 329 aa31.7■■■□□ 2.66
SCN1B-201ENST00000262631 ASAP1Q9ULH1 1129 aa31.7■■■□□ 2.66
SCN1B-201ENST00000262631 NHSQ6T4R5 1651 aa31.69■■■□□ 2.66
SCN1B-201ENST00000262631 ZNF790Q6PG37 636 aa31.69■■■□□ 2.66
SCN1B-201ENST00000262631 SBF2Q86WG5 1849 aa31.68■■■□□ 2.66
SCN1B-201ENST00000262631 ATG3Q9NT62 314 aa31.67■■■□□ 2.66
SCN1B-201ENST00000262631 TRIM37O94972 964 aa31.67■■■□□ 2.66
SCN1B-201ENST00000262631 KDM3BQ7LBC6 1761 aa31.66■■■□□ 2.66
SCN1B-201ENST00000262631 ILDR2Q71H61 639 aa31.66■■■□□ 2.66
SCN1B-201ENST00000262631 KRT24Q2M2I5 525 aa31.65■■■□□ 2.66
SCN1B-201ENST00000262631 BCL11BQ9C0K0 894 aaPredicted RBP31.65■■■□□ 2.66
SCN1B-201ENST00000262631 PAPPAQ13219 1627 aa31.64■■■□□ 2.66
SCN1B-201ENST00000262631 EIF4A1P60842 406 aaKnown RBP31.63■■■□□ 2.65
SCN1B-201ENST00000262631 ZNF496Q96IT1 587 aaPredicted RBP31.62■■■□□ 2.65
SCN1B-201ENST00000262631 EXOSC9Q06265 439 aaKnown RBP31.61■■■□□ 2.65
SCN1B-201ENST00000262631 TTC5Q8N0Z6 440 aa31.61■■■□□ 2.65
SCN1B-201ENST00000262631 BTAF1O14981 1849 aa31.6■■■□□ 2.65
SCN1B-201ENST00000262631 KCPQ6ZWJ8 1503 aa31.6■■■□□ 2.65
SCN1B-201ENST00000262631 PTCD1O75127 700 aaKnown RBP31.6■■■□□ 2.65
SCN1B-201ENST00000262631 C8orf58Q8NAV2 365 aa31.6■■■□□ 2.65
SCN1B-201ENST00000262631 TSPYL6Q8N831 410 aa31.59■■■□□ 2.65
SCN1B-201ENST00000262631 ELL2O00472 640 aaPredicted RBP31.57■■■□□ 2.65
SCN1B-201ENST00000262631 PELP1Q8IZL8 1130 aaKnown RBP31.57■■■□□ 2.64
SCN1B-201ENST00000262631 PALLDQ8WX93 1383 aa31.56■■■□□ 2.64
SCN1B-201ENST00000262631 HEG1Q9ULI3 1381 aa31.56■■■□□ 2.64
SCN1B-201ENST00000262631 UBR2Q8IWV8 1755 aa31.56■■■□□ 2.64
SCN1B-201ENST00000262631 FMNL2Q96PY5 1086 aa31.55■■■□□ 2.64
SCN1B-201ENST00000262631 PRAMEF22A3QJZ6 481 aa31.54■■■□□ 2.64
SCN1B-201ENST00000262631 SLC4A9Q96Q91 983 aa31.54■■■□□ 2.64
SCN1B-201ENST00000262631 RBM42Q9BTD8 480 aaKnown RBP31.54■■■□□ 2.64
SCN1B-201ENST00000262631 SMARCC1Q92922 1105 aaPredicted RBP31.53■■■□□ 2.64
SCN1B-201ENST00000262631 GIGYF1O75420 1035 aaPredicted RBP31.52■■■□□ 2.64
SCN1B-201ENST00000262631 TWISTNBQ3B726 338 aaPredicted RBP31.51■■■□□ 2.64
SCN1B-201ENST00000262631 LOC102724428A0A0B4J2F2 783 aa31.49■■■□□ 2.63
SCN1B-201ENST00000262631 SIK1P57059 783 aa31.49■■■□□ 2.63
SCN1B-201ENST00000262631 TNS1Q9HBL0 1735 aaKnown RBP31.48■■■□□ 2.63
SCN1B-201ENST00000262631 VAMP4O75379 141 aa31.48■■■□□ 2.63
SCN1B-201ENST00000262631 APBA3O96018 575 aa31.48■■■□□ 2.63
SCN1B-201ENST00000262631 SNRPA1P09661 255 aaKnown RBP31.48■■■□□ 2.63
SCN1B-201ENST00000262631 KCNQ4P56696 695 aa31.47■■■□□ 2.63
SCN1B-201ENST00000262631 USP16Q9Y5T5 823 aa31.45■■■□□ 2.63
SCN1B-201ENST00000262631 C5P01031 1676 aa31.45■■■□□ 2.63
SCN1B-201ENST00000262631 VSIG10Q8N0Z9 540 aa31.44■■■□□ 2.62
SCN1B-201ENST00000262631 ATP6V1AP38606 617 aa31.44■■■□□ 2.62
SCN1B-201ENST00000262631 DNAJC10Q8IXB1 793 aa31.44■■■□□ 2.62
SCN1B-201ENST00000262631 NECTIN2Q92692 538 aa31.44■■■□□ 2.62
SCN1B-201ENST00000262631 HOXB7P09629 217 aa31.43■■■□□ 2.62
SCN1B-201ENST00000262631 ITPK1Q13572 414 aa31.43■■■□□ 2.62
SCN1B-201ENST00000262631 EIF2S2P20042 333 aaKnown RBP31.42■■■□□ 2.62
SCN1B-201ENST00000262631 LY75O60449 1722 aa31.42■■■□□ 2.62
SCN1B-201ENST00000262631 PLSCR1O15162 318 aa31.41■■■□□ 2.62
SCN1B-201ENST00000262631 TCERG1O14776 1098 aaKnown RBP31.41■■■□□ 2.62
SCN1B-201ENST00000262631 CT47B1P0C2W7 299 aaPredicted RBP31.41■■■□□ 2.62
SCN1B-201ENST00000262631 PROM2Q8N271 834 aa31.41■■■□□ 2.62
SCN1B-201ENST00000262631 SOS1Q07889 1333 aaPredicted RBP31.4■■■□□ 2.62
SCN1B-201ENST00000262631 HDGFL1Q5TGJ6 251 aa31.4■■■□□ 2.62
SCN1B-201ENST00000262631 CCNL1Q9UK58 526 aaPredicted RBP31.4■■■□□ 2.62
SCN1B-201ENST00000262631 TJP1Q07157 1748 aa31.39■■■□□ 2.62
SCN1B-201ENST00000262631 LRRC4BQ9NT99 713 aa31.39■■■□□ 2.62
SCN1B-201ENST00000262631 RARSP54136 660 aaKnown RBP31.37■■■□□ 2.61
SCN1B-201ENST00000262631 CYP19A1P11511 503 aaPredicted RBP31.36■■■□□ 2.61
SCN1B-201ENST00000262631 TXNRD1Q16881 649 aa31.36■■■□□ 2.61
SCN1B-201ENST00000262631 SSH1Q8WYL5 1049 aa31.36■■■□□ 2.61
SCN1B-201ENST00000262631 BCL2L13Q9BXK5 485 aa31.36■■■□□ 2.61
SCN1B-201ENST00000262631 TEX13AQ9BXU3 409 aaPredicted RBP31.36■■■□□ 2.61
SCN1B-201ENST00000262631 EN1Q05925 392 aaPredicted RBP31.35■■■□□ 2.61
SCN1B-201ENST00000262631 LINC00116Q8NCU8 138 aa31.35■■■□□ 2.61
SCN1B-201ENST00000262631 RCAN3Q9UKA8 241 aa31.35■■■□□ 2.61
SCN1B-201ENST00000262631 ZNF831Q5JPB2 1677 aa31.35■■■□□ 2.61
SCN1B-201ENST00000262631 CICQ96RK0 1608 aaPredicted RBP31.35■■■□□ 2.61
SCN1B-201ENST00000262631 SF3B2Q13435 895 aaKnown RBP31.35■■■□□ 2.61
SCN1B-201ENST00000262631 DEFB132Q7Z7B7 95 aa31.35■■■□□ 2.61
SCN1B-201ENST00000262631 PIP4K2AP48426 406 aaPredicted RBP31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms