RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FLIIQ13045 1269 aa27.83■■■□□ 2.05
MCF2L-201ENST00000261963 RBM33Q96EV2 1170 aaKnown RBP27.83■■■□□ 2.05
MCF2L-201ENST00000261963 RBM42Q9BTD8 480 aaKnown RBP27.83■■■□□ 2.05
MCF2L-201ENST00000261963 CCDC30Q5VVM6 783 aa27.83■■■□□ 2.05
MCF2L-201ENST00000261963 C14orf37Q86TY3 774 aa27.83■■■□□ 2.05
MCF2L-201ENST00000261963 USHBP1Q8N6Y0 703 aa27.83■■■□□ 2.05
MCF2L-201ENST00000261963 CHD2O14647 1828 aaKnown RBP27.82■■■□□ 2.04
MCF2L-201ENST00000261963 FAM208AQ9UK61 1670 aaKnown RBP27.82■■■□□ 2.04
MCF2L-201ENST00000261963 HMMRO75330 724 aa27.82■■■□□ 2.04
MCF2L-201ENST00000261963 ANKLE2Q86XL3 938 aa27.81■■■□□ 2.04
MCF2L-201ENST00000261963 PDCL3Q9H2J4 239 aa27.81■■■□□ 2.04
MCF2L-201ENST00000261963 HSP90AB1P08238 724 aaKnown RBP27.81■■■□□ 2.04
MCF2L-201ENST00000261963 SDSP20132 328 aa27.81■■■□□ 2.04
MCF2L-201ENST00000261963 TAF7Q15545 349 aaPredicted RBP27.81■■■□□ 2.04
MCF2L-201ENST00000261963 NECTIN2Q92692 538 aa27.8■■■□□ 2.04
MCF2L-201ENST00000261963 BABAM1Q9NWV8 329 aa27.8■■■□□ 2.04
MCF2L-201ENST00000261963 GNAI2P04899 355 aa27.79■■■□□ 2.04
MCF2L-201ENST00000261963 IP6K1Q92551 441 aa27.79■■■□□ 2.04
MCF2L-201ENST00000261963 NFAT5O94916 1531 aa27.79■■■□□ 2.04
MCF2L-201ENST00000261963 FKBP5Q13451 457 aaPredicted RBP27.79■■■□□ 2.04
MCF2L-201ENST00000261963 SOS1Q07889 1333 aaPredicted RBP27.78■■■□□ 2.04
MCF2L-201ENST00000261963 K7ELQ4 463 aaPredicted RBP27.77■■■□□ 2.04
MCF2L-201ENST00000261963 USP26Q9BXU7 913 aa27.76■■■□□ 2.03
MCF2L-201ENST00000261963 CIZ1Q9ULV3 898 aaPredicted RBP27.76■■■□□ 2.03
MCF2L-201ENST00000261963 LTN1O94822 1766 aa27.76■■■□□ 2.03
MCF2L-201ENST00000261963 GAS2L3Q86XJ1 694 aa27.76■■■□□ 2.03
MCF2L-201ENST00000261963 SKOR2Q2VWA4 1001 aaPredicted RBP27.75■■■□□ 2.03
MCF2L-201ENST00000261963 NBPF6Q5VWK0 638 aa27.75■■■□□ 2.03
MCF2L-201ENST00000261963 NBPF4Q96M43 638 aa27.75■■■□□ 2.03
MCF2L-201ENST00000261963 ADGRL3Q9HAR2 1447 aa27.75■■■□□ 2.03
MCF2L-201ENST00000261963 CEMIPQ8WUJ3 1361 aa27.75■■■□□ 2.03
MCF2L-201ENST00000261963 GBP4Q96PP9 640 aa27.74■■■□□ 2.03
MCF2L-201ENST00000261963 OSBPL3Q9H4L5 887 aa27.74■■■□□ 2.03
MCF2L-201ENST00000261963 TNPO1Q92973 898 aaKnown RBP27.73■■■□□ 2.03
MCF2L-201ENST00000261963 GNAI3P08754 354 aa27.72■■■□□ 2.03
MCF2L-201ENST00000261963 PTMSP20962 102 aa27.72■■■□□ 2.03
MCF2L-201ENST00000261963 EXOC6BQ9Y2D4 811 aa27.72■■■□□ 2.03
MCF2L-201ENST00000261963 PDE1AP54750 535 aa27.72■■■□□ 2.03
MCF2L-201ENST00000261963 ESCO1Q5FWF5 840 aa27.72■■■□□ 2.03
MCF2L-201ENST00000261963 ZNF142P52746 1687 aaPredicted RBP27.71■■■□□ 2.03
MCF2L-201ENST00000261963 PNMA6EA0A0J9YXQ4 647 aa27.71■■■□□ 2.03
MCF2L-201ENST00000261963 KIAA1211Q6ZU35 1233 aa27.71■■■□□ 2.03
MCF2L-201ENST00000261963 PSME1Q06323 249 aa27.71■■■□□ 2.03
MCF2L-201ENST00000261963 SALL3Q9BXA9 1300 aa27.7■■■□□ 2.03
MCF2L-201ENST00000261963 RAB3GAP1Q15042 981 aa27.7■■■□□ 2.03
MCF2L-201ENST00000261963 RABEP1Q15276 862 aa27.7■■■□□ 2.03
MCF2L-201ENST00000261963 ATP8B2P98198 1209 aa27.7■■■□□ 2.02
MCF2L-201ENST00000261963 FOXD4L1Q9NU39 408 aa27.7■■■□□ 2.02
MCF2L-201ENST00000261963 CACNA1FO60840 1977 aa27.69■■■□□ 2.02
MCF2L-201ENST00000261963 HDGFL1Q5TGJ6 251 aa27.69■■■□□ 2.02
MCF2L-201ENST00000261963 PXDNLA1KZ92 1463 aa27.69■■■□□ 2.02
MCF2L-201ENST00000261963 MED1Q15648 1581 aaPredicted RBP27.69■■■□□ 2.02
MCF2L-201ENST00000261963 CCDC173Q0VFZ6 552 aa27.69■■■□□ 2.02
MCF2L-201ENST00000261963 LGR6Q9HBX8 967 aa27.68■■■□□ 2.02
MCF2L-201ENST00000261963 CASC1Q6TDU7 716 aa27.68■■■□□ 2.02
MCF2L-201ENST00000261963 KCNH5Q8NCM2 988 aa27.67■■■□□ 2.02
MCF2L-201ENST00000261963 USP44Q9H0E7 712 aa27.67■■■□□ 2.02
MCF2L-201ENST00000261963 PHAXQ9H814 394 aaKnown RBP27.67■■■□□ 2.02
MCF2L-201ENST00000261963 LRRFIP2Q9Y608 721 aaKnown RBP27.67■■■□□ 2.02
MCF2L-201ENST00000261963 N4BP2Q86UW6 1770 aaPredicted RBP27.66■■■□□ 2.02
MCF2L-201ENST00000261963 LRRCC1Q9C099 1032 aa27.66■■■□□ 2.02
MCF2L-201ENST00000261963 IBTKQ9P2D0 1353 aaPredicted RBP27.65■■■□□ 2.02
MCF2L-201ENST00000261963 EIF4A1P60842 406 aaKnown RBP27.65■■■□□ 2.02
MCF2L-201ENST00000261963 PPP1R9BQ96SB3 815 aa27.65■■■□□ 2.02
MCF2L-201ENST00000261963 ZBTB7CA1YPR0 619 aa27.65■■■□□ 2.02
MCF2L-201ENST00000261963 TSHZ3Q63HK5 1081 aa27.65■■■□□ 2.02
MCF2L-201ENST00000261963 ZSCAN30Q86W11 494 aa27.65■■■□□ 2.02
MCF2L-201ENST00000261963 LRRC59Q96AG4 307 aaKnown RBP27.65■■■□□ 2.02
MCF2L-201ENST00000261963 PHRF1Q9P1Y6 1649 aaKnown RBP27.64■■■□□ 2.01
MCF2L-201ENST00000261963 ERC2O15083 957 aa27.62■■■□□ 2.01
MCF2L-201ENST00000261963 OFD1O75665 1012 aa27.62■■■□□ 2.01
MCF2L-201ENST00000261963 ANP32BQ92688 251 aaKnown RBP27.62■■■□□ 2.01
MCF2L-201ENST00000261963 ORAI2Q96SN7 254 aa27.62■■■□□ 2.01
MCF2L-201ENST00000261963 SETD1BQ9UPS6 1966 aaKnown RBP27.62■■■□□ 2.01
MCF2L-201ENST00000261963 REC8O95072 547 aa27.61■■■□□ 2.01
MCF2L-201ENST00000261963 KCNQ3O43525 872 aa27.61■■■□□ 2.01
MCF2L-201ENST00000261963 RGPD2P0DJD1 1756 aa27.61■■■□□ 2.01
MCF2L-201ENST00000261963 UBTFL1P0CB47 393 aaPredicted RBP27.6■■■□□ 2.01
MCF2L-201ENST00000261963 NASPP49321 788 aaPredicted RBP27.6■■■□□ 2.01
MCF2L-201ENST00000261963 EIF2S2P20042 333 aaKnown RBP27.6■■■□□ 2.01
MCF2L-201ENST00000261963 MX1P20591 662 aa27.6■■■□□ 2.01
MCF2L-201ENST00000261963 NPHP4O75161 1426 aaPredicted RBP27.6■■■□□ 2.01
MCF2L-201ENST00000261963 GCP02774 474 aa27.59■■■□□ 2.01
MCF2L-201ENST00000261963 HOXB7P09629 217 aa27.59■■■□□ 2.01
MCF2L-201ENST00000261963 XPCQ01831 940 aaPredicted RBP27.59■■■□□ 2.01
MCF2L-201ENST00000261963 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.59■■■□□ 2.01
MCF2L-201ENST00000261963 ARHGEF25Q86VW2 580 aa27.59■■■□□ 2.01
MCF2L-201ENST00000261963 KDM3BQ7LBC6 1761 aa27.59■■■□□ 2.01
MCF2L-201ENST00000261963 TERF1P54274 439 aa27.59■■■□□ 2.01
MCF2L-201ENST00000261963 AKAP4Q5JQC9 854 aa27.59■■■□□ 2.01
MCF2L-201ENST00000261963 ZNF530Q6P9A1 599 aaPredicted RBP27.59■■■□□ 2.01
MCF2L-201ENST00000261963 MSNP26038 577 aaKnown RBP27.58■■■□□ 2.01
MCF2L-201ENST00000261963 SSH3Q8TE77 659 aa27.58■■■□□ 2.01
MCF2L-201ENST00000261963 CHPF2Q9P2E5 772 aa27.58■■■□□ 2.01
MCF2L-201ENST00000261963 NCAPD2Q15021 1401 aa27.58■■■□□ 2.01
MCF2L-201ENST00000261963 SSFA2P28290 1259 aa27.57■■■□□ 2
MCF2L-201ENST00000261963 STAP2Q9UGK3 403 aa27.57■■■□□ 2
MCF2L-201ENST00000261963 TUBGCP6Q96RT7 1819 aa27.57■■■□□ 2
MCF2L-201ENST00000261963 SLIT3O75094 1523 aa27.57■■■□□ 2
MCF2L-201ENST00000261963 ADAMTSL3P82987 1691 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms