RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 SAMD1Q6SPF0 538 aaPredicted RBP11.47□□□□□ -0.57
CIT-201ENST00000261833 KRT222Q8N1A0 295 aa11.47□□□□□ -0.57
CIT-201ENST00000261833 PDRG1Q9NUG6 133 aa11.46□□□□□ -0.57
CIT-201ENST00000261833 HSP90AB2PQ58FF8 381 aa11.46□□□□□ -0.57
CIT-201ENST00000261833 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
CIT-201ENST00000261833 CCDC102AQ96A19 550 aa11.46□□□□□ -0.57
CIT-201ENST00000261833 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.57
CIT-201ENST00000261833 KIF5CO60282 957 aa11.46□□□□□ -0.58
CIT-201ENST00000261833 STX1AQ16623 288 aa11.46□□□□□ -0.58
CIT-201ENST00000261833 NECTIN2Q92692 538 aa11.46□□□□□ -0.58
CIT-201ENST00000261833 CRACR2AQ9BSW2 395 aa11.46□□□□□ -0.58
CIT-201ENST00000261833 TCOF1Q13428 1488 aaKnown RBP11.46□□□□□ -0.58
CIT-201ENST00000261833 SMAP1Q8IYB5 467 aaPredicted RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 LTV1Q96GA3 475 aaPredicted RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 ANO10Q9NW15 660 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 RARSP54136 660 aaKnown RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 ABCC5O15440 1437 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 TMEM57Q8N5G2 664 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 SNX21Q969T3 373 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 TNNT1P13805 278 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 TUBB4BP68371 445 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 CEBPZQ03701 1054 aaKnown RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 CT47A1Q5JQC4 288 aaPredicted RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 C16orf45Q96MC5 204 aaPredicted RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 RBM25P49756 843 aaKnown RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 TSR2Q969E8 191 aaKnown RBP11.45□□□□□ -0.58
CIT-201ENST00000261833 FMNL2Q96PY5 1086 aa11.45□□□□□ -0.58
CIT-201ENST00000261833 BAG4O95429 457 aaKnown RBP11.44□□□□□ -0.58
CIT-201ENST00000261833 LUZP1Q86V48 1076 aa11.44□□□□□ -0.58
CIT-201ENST00000261833 BCORL1Q5H9F3 1711 aa11.44□□□□□ -0.58
CIT-201ENST00000261833 EPB41L2O43491 1005 aaKnown RBP11.44□□□□□ -0.58
CIT-201ENST00000261833 OFD1O75665 1012 aa11.44□□□□□ -0.58
CIT-201ENST00000261833 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
CIT-201ENST00000261833 DUSP27Q5VZP5 1158 aa11.44□□□□□ -0.58
CIT-201ENST00000261833 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■■■□ 19.8
CIT-201ENST00000261833 BLOC1S2Q6QNY1 142 aa11.44□□□□□ -0.58
CIT-201ENST00000261833 SURF6O75683 361 aaKnown RBP11.44□□□□□ -0.58
CIT-201ENST00000261833 AFDNP55196 1824 aaKnown RBP11.43□□□□□ -0.58
CIT-201ENST00000261833 PTPRCP08575 1304 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 CEP131Q9UPN4 1083 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 RIC3Q7Z5B4 369 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 C20orf194Q5TEA3 1177 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 FAM177A1Q8N128 213 aaPredicted RBP11.43□□□□□ -0.58
CIT-201ENST00000261833 RBM33Q96EV2 1170 aaKnown RBP11.43□□□□□ -0.58
CIT-201ENST00000261833 GOLGA6L10A0A0M3HER8 536 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 CCDC150Q8NCX0 1101 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 SHANK2Q9UPX8 1470 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 XRCC6P12956 609 aaKnown RBP eCLIP11.43□□□□□ -0.58
CIT-201ENST00000261833 DLG5Q8TDM6 1919 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 ADAMTS12P58397 1594 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 BMS1Q14692 1282 aaKnown RBP11.43□□□□□ -0.58
CIT-201ENST00000261833 CTR9Q6PD62 1173 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 KIAA1328Q86T90 577 aa11.43□□□□□ -0.58
CIT-201ENST00000261833 SLC3A2P08195 630 aaKnown RBP11.42□□□□□ -0.58
CIT-201ENST00000261833 PARD3Q8TEW0 1356 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 SLC26A8Q96RN1 970 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 ZMYM3Q14202 1370 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 BRPF1P55201 1214 aaPredicted RBP11.42□□□□□ -0.58
CIT-201ENST00000261833 JAKMIP3Q5VZ66 844 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 CCDC83Q8IWF9 413 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 TRIM22Q8IYM9 498 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
CIT-201ENST00000261833 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 IMMTQ16891 758 aaKnown RBP11.42□□□□□ -0.58
CIT-201ENST00000261833 TBC1D9Q6ZT07 1266 aa11.42□□□□□ -0.58
CIT-201ENST00000261833 BLMP54132 1417 aaPredicted RBP11.42□□□□□ -0.58
CIT-201ENST00000261833 FCHSD2O94868 740 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 NUCB1Q02818 461 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 ARHGAP29Q52LW3 1261 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 GBP2P32456 591 aaPredicted RBP11.41□□□□□ -0.58
CIT-201ENST00000261833 TMPOP42166 694 aaKnown RBP11.41□□□□□ -0.58
CIT-201ENST00000261833 TERF1P54274 439 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 DYDC1Q8WWB3 177 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 DDX19AQ9NUU7 478 aaKnown RBP11.41□□□□□ -0.58
CIT-201ENST00000261833 TUBB4AP04350 444 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 CFAP100Q494V2 611 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 KDM5DQ9BY66 1539 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 SNW1Q13573 536 aaKnown RBP11.41□□□□□ -0.58
CIT-201ENST00000261833 CAMK4Q16566 473 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 WASF1Q92558 559 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
CIT-201ENST00000261833 RPAP2Q8IXW5 612 aaPredicted RBP11.4□□□□□ -0.58
CIT-201ENST00000261833 CDK5RAP3Q96JB5 506 aa11.4□□□□□ -0.58
CIT-201ENST00000261833 JAKMIP1Q96N16 626 aaKnown RBP11.4□□□□□ -0.58
CIT-201ENST00000261833 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.58
CIT-201ENST00000261833 ZKSCAN5Q9Y2L8 839 aa11.4□□□□□ -0.58
CIT-201ENST00000261833 SSFA2P28290 1259 aa11.4□□□□□ -0.58
CIT-201ENST00000261833 SEPT7Q16181 437 aaKnown RBP11.4□□□□□ -0.58
CIT-201ENST00000261833 WASHC4Q2M389 1173 aa11.4□□□□□ -0.58
CIT-201ENST00000261833 CWC27Q6UX04 472 aaKnown RBP11.4□□□□□ -0.58
CIT-201ENST00000261833 FEZ1Q99689 392 aa11.4□□□□□ -0.58
CIT-201ENST00000261833 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
CIT-201ENST00000261833 SKIDA1Q1XH10 827 aa11.4□□□□□ -0.58
CIT-201ENST00000261833 CHD2O14647 1828 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms