RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 USP26Q9BXU7 913 aa17.78■□□□□ 0.44
SFSWAP-201ENST00000261674 EXOC6BQ9Y2D4 811 aa17.78■□□□□ 0.44
SFSWAP-201ENST00000261674 EIF4A2Q14240 407 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-201ENST00000261674 BRINP3Q76B58 766 aa17.77■□□□□ 0.44
SFSWAP-201ENST00000261674 AK9Q5TCS8 1911 aa17.77■□□□□ 0.44
SFSWAP-201ENST00000261674 CEP85Q6P2H3 762 aa17.77■□□□□ 0.44
SFSWAP-201ENST00000261674 ANKRD44Q8N8A2 993 aa17.77■□□□□ 0.44
SFSWAP-201ENST00000261674 ST18O60284 1047 aa17.76■□□□□ 0.43
SFSWAP-201ENST00000261674 G2E3Q7L622 706 aa17.76■□□□□ 0.43
SFSWAP-201ENST00000261674 RILPL2Q969X0 211 aa17.76■□□□□ 0.43
SFSWAP-201ENST00000261674 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
SFSWAP-201ENST00000261674 TRIM6-TRIM34B2RNG4 842 aa17.75■□□□□ 0.43
SFSWAP-201ENST00000261674 GCP02774 474 aa17.75■□□□□ 0.43
SFSWAP-201ENST00000261674 RTF1Q92541 710 aaKnown RBP17.75■□□□□ 0.43
SFSWAP-201ENST00000261674 NCOA3Q9Y6Q9 1424 aa17.75■□□□□ 0.43
SFSWAP-201ENST00000261674 NEK4P51957 841 aa17.75■□□□□ 0.43
SFSWAP-201ENST00000261674 TSPYL4Q9UJ04 414 aa17.75■□□□□ 0.43
SFSWAP-201ENST00000261674 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
SFSWAP-201ENST00000261674 RPAP2Q8IXW5 612 aaPredicted RBP17.74■□□□□ 0.43
SFSWAP-201ENST00000261674 XRN1Q8IZH2 1706 aaKnown RBP17.74■□□□□ 0.43
SFSWAP-201ENST00000261674 C1orf167Q5SNV9 1468 aa17.73■□□□□ 0.43
SFSWAP-201ENST00000261674 NALCNQ8IZF0 1738 aa17.73■□□□□ 0.43
SFSWAP-201ENST00000261674 NUCB2P80303 420 aa17.73■□□□□ 0.43
SFSWAP-201ENST00000261674 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 PTMSP20962 102 aa17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 ISY1Q9ULR0 285 aaKnown RBP17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 CDC42BPGQ6DT37 1551 aa17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 NUTM2BA6NNL0 878 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 NUTM2EB1AL46 878 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 KLHL40Q2TBA0 621 aa17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 NUTM2AQ8IVF1 878 aaPredicted RBP17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 REC8O95072 547 aa17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
SFSWAP-201ENST00000261674 HMMRO75330 724 aa17.71■□□□□ 0.43
SFSWAP-201ENST00000261674 CHL1O00533 1208 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 RNF214Q8ND24 703 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 ANO2Q9NQ90 1003 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 STRCP1A6NGW2 1772 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 ERC2O15083 957 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 MSNP26038 577 aaKnown RBP17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 FKBP5Q13451 457 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 HSP90AA2PQ14568 343 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 KNDC1Q76NI1 1749 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 EYA1Q99502 592 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 STRN4Q9NRL3 753 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 STRCQ7RTU9 1775 aa17.7■□□□□ 0.42
SFSWAP-201ENST00000261674 HOXC9P31274 260 aa17.69■□□□□ 0.42
SFSWAP-201ENST00000261674 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
SFSWAP-201ENST00000261674 ZSCAN23Q3MJ62 389 aa17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 UPF3BQ9BZI7 483 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 PDE1AP54750 535 aa17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 NLRP2Q9NX02 1062 aa17.68■□□□□ 0.42
SFSWAP-201ENST00000261674 UBAP1LF5GYI3 381 aa17.67■□□□□ 0.42
SFSWAP-201ENST00000261674 MAP4K4O95819 1239 aaPredicted RBP17.67■□□□□ 0.42
SFSWAP-201ENST00000261674 CCDC173Q0VFZ6 552 aa17.67■□□□□ 0.42
SFSWAP-201ENST00000261674 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
SFSWAP-201ENST00000261674 MPNDQ8N594 471 aa17.66■□□□□ 0.42
SFSWAP-201ENST00000261674 IL1RAPL2Q9NP60 686 aa17.66■□□□□ 0.42
SFSWAP-201ENST00000261674 MST1RQ04912 1400 aa17.66■□□□□ 0.42
SFSWAP-201ENST00000261674 SYCE3A1L190 88 aa17.66■□□□□ 0.42
SFSWAP-201ENST00000261674 UBE2Q2Q8WVN8 375 aa17.66■□□□□ 0.42
SFSWAP-201ENST00000261674 RBSNQ9H1K0 784 aa17.66■□□□□ 0.42
SFSWAP-201ENST00000261674 NPHP3Q7Z494 1330 aa17.66■□□□□ 0.42
SFSWAP-201ENST00000261674 NBPF6Q5VWK0 638 aa17.65■□□□□ 0.42
SFSWAP-201ENST00000261674 NBPF4Q96M43 638 aa17.65■□□□□ 0.42
SFSWAP-201ENST00000261674 DTNBO60941 627 aa17.65■□□□□ 0.42
SFSWAP-201ENST00000261674 GDPD2Q9HCC8 539 aa17.65■□□□□ 0.42
SFSWAP-201ENST00000261674 GNAI2P04899 355 aa17.64■□□□□ 0.42
SFSWAP-201ENST00000261674 LARP6Q9BRS8 491 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-201ENST00000261674 NSFL1CQ9UNZ2 370 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-201ENST00000261674 ANKARQ7Z5J8 1434 aa17.64■□□□□ 0.41
SFSWAP-201ENST00000261674 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
SFSWAP-201ENST00000261674 TMX3Q96JJ7 454 aa17.64■□□□□ 0.41
SFSWAP-201ENST00000261674 CWC22Q9HCG8 908 aaKnown RBP17.63■□□□□ 0.41
SFSWAP-201ENST00000261674 PRDM11Q9NQV5 511 aa17.63■□□□□ 0.41
SFSWAP-201ENST00000261674 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
SFSWAP-201ENST00000261674 GPT2Q8TD30 523 aa17.63■□□□□ 0.41
SFSWAP-201ENST00000261674 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
SFSWAP-201ENST00000261674 PTPRCP08575 1304 aa17.63■□□□□ 0.41
SFSWAP-201ENST00000261674 A0A0G2JS52 829 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 PALD1Q9ULE6 856 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 SSH2Q76I76 1423 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 ZSCAN30Q86W11 494 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 LRRCC1Q9C099 1032 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 OVOS2A0A0J9YW53 1432 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 OVOS2Q6IE36 1432 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 ANKRD24Q8TF21 1146 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 ATP10DQ9P241 1426 aa17.62■□□□□ 0.41
SFSWAP-201ENST00000261674 EIF2S2P20042 333 aaKnown RBP17.61■□□□□ 0.41
SFSWAP-201ENST00000261674 AATKQ6ZMQ8 1374 aa17.61■□□□□ 0.41
SFSWAP-201ENST00000261674 NUTM1Q86Y26 1132 aa17.61■□□□□ 0.41
SFSWAP-201ENST00000261674 ARID3AQ99856 593 aa17.61■□□□□ 0.41
SFSWAP-201ENST00000261674 CDK12Q9NYV4 1490 aaPredicted RBP17.61■□□□□ 0.41
SFSWAP-201ENST00000261674 MCCP23508 829 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms