RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.08□□□□□ -0.48
PALB2-201ENST00000261584 PPP1R42Q7Z4L9 355 aa12.08□□□□□ -0.48
PALB2-201ENST00000261584 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
PALB2-201ENST00000261584 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 ESYT1Q9BSJ8 1104 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 CCDC30Q5VVM6 783 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 LUZP1Q86V48 1076 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 BIN1O00499 593 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 STX6O43752 255 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 SMC2O95347 1197 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 ABTB2Q8N961 1025 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
PALB2-201ENST00000261584 PTGS1P23219 599 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 KIF2CQ99661 725 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
PALB2-201ENST00000261584 MSH6P52701 1360 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 PTPRTO14522 1441 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 PPIP5K1Q6PFW1 1433 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 RAB11FIP3O75154 756 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 CCDC192P0DO97 292 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 U2AF2P26368 475 aaKnown RBP eCLIP12.06□□□□□ -0.48
PALB2-201ENST00000261584 SPATA32Q96LK8 384 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
PALB2-201ENST00000261584 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 NUP62CLQ9H1M0 184 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 CCT2P78371 535 aaKnown RBP12.05□□□□□ -0.48
PALB2-201ENST00000261584 RUFY2Q8WXA3 655 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
PALB2-201ENST00000261584 NOL7Q9UMY1 257 aaKnown RBP12.05□□□□□ -0.48
PALB2-201ENST00000261584 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 CCT4P50991 539 aaKnown RBP12.05□□□□□ -0.48
PALB2-201ENST00000261584 AK2P54819 239 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 MPRIPQ6WCQ1 1025 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
PALB2-201ENST00000261584 CCDC183Q5T5S1 534 aa12.04□□□□□ -0.48
PALB2-201ENST00000261584 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
PALB2-201ENST00000261584 EIF4A2Q14240 407 aaKnown RBP12.04□□□□□ -0.48
PALB2-201ENST00000261584 PI4KAP2A4QPH2 592 aa12.04□□□□□ -0.48
PALB2-201ENST00000261584 ME1P48163 572 aa12.04□□□□□ -0.48
PALB2-201ENST00000261584 PI4KAP1Q8N8J0 262 aa12.04□□□□□ -0.48
PALB2-201ENST00000261584 CCDC112Q8NEF3 446 aa12.04□□□□□ -0.48
PALB2-201ENST00000261584 ANKRD36BQ8N2N9 1353 aa12.04□□□□□ -0.48
PALB2-201ENST00000261584 PES1O00541 588 aaKnown RBP12.03□□□□□ -0.48
PALB2-201ENST00000261584 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 PDILTQ8N807 584 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 KLHDC4Q8TBB5 520 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 NRDCO43847 1150 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 SYT1P21579 422 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
PALB2-201ENST00000261584 MCM2P49736 904 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 KRT85P78386 507 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 LRMPQ12912 555 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 CHST3Q7LGC8 479 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 APPP05067 770 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 TNNT1P13805 278 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 DACT1Q9NYF0 836 aa12.03□□□□□ -0.48
PALB2-201ENST00000261584 HMGN5P82970 282 aaKnown RBP12.02□□□□□ -0.48
PALB2-201ENST00000261584 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.48
PALB2-201ENST00000261584 CHMLP26374 656 aa12.02□□□□□ -0.49
PALB2-201ENST00000261584 DNAJC25Q9H1X3 360 aa12.02□□□□□ -0.49
PALB2-201ENST00000261584 MAP3K11Q16584 847 aa12.02□□□□□ -0.49
PALB2-201ENST00000261584 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.49
PALB2-201ENST00000261584 LIMCH1Q9UPQ0 1083 aa12.02□□□□□ -0.49
PALB2-201ENST00000261584 ERVK-7P63135 1459 aa12.02□□□□□ -0.49
PALB2-201ENST00000261584 CEBPAP49715 358 aaPredicted RBP12.02□□□□□ -0.49
PALB2-201ENST00000261584 CCDC73Q6ZRK6 1079 aa12.02□□□□□ -0.49
PALB2-201ENST00000261584 EDC3Q96F86 508 aaKnown RBP12.01□□□□□ -0.49
PALB2-201ENST00000261584 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
PALB2-201ENST00000261584 ADGRL1O94910 1474 aa12.01□□□□□ -0.49
PALB2-201ENST00000261584 WASHC4Q2M389 1173 aa12.01□□□□□ -0.49
PALB2-201ENST00000261584 ANO6Q4KMQ2 910 aa12.01□□□□□ -0.49
PALB2-201ENST00000261584 ZSCAN22P10073 491 aaPredicted RBP12.01□□□□□ -0.49
PALB2-201ENST00000261584 C1orf141Q5JVX7 400 aa12.01□□□□□ -0.49
PALB2-201ENST00000261584 DYNC1I1O14576 645 aa12□□□□□ -0.49
PALB2-201ENST00000261584 POLR3GO15318 223 aaPredicted RBP12□□□□□ -0.49
PALB2-201ENST00000261584 ZNF445P59923 1031 aa12□□□□□ -0.49
PALB2-201ENST00000261584 NAA30Q147X3 362 aaPredicted RBP12□□□□□ -0.49
PALB2-201ENST00000261584 TAF7LQ5H9L4 462 aa12□□□□□ -0.49
PALB2-201ENST00000261584 CLIP2Q9UDT6 1046 aa12□□□□□ -0.49
PALB2-201ENST00000261584 ZDHHC9Q9Y397 364 aa12□□□□□ -0.49
PALB2-201ENST00000261584 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
PALB2-201ENST00000261584 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
PALB2-201ENST00000261584 CWF19L2Q2TBE0 894 aaKnown RBP12□□□□□ -0.49
PALB2-201ENST00000261584 CCDC82Q8N4S0 544 aa12□□□□□ -0.49
PALB2-201ENST00000261584 RHPN1Q8TCX5 695 aa12□□□□□ -0.49
PALB2-201ENST00000261584 CPLX1O14810 134 aa11.99□□□□□ -0.49
PALB2-201ENST00000261584 PPP1R9BQ96SB3 815 aa11.99□□□□□ -0.49
PALB2-201ENST00000261584 ZSWIM4Q9H7M6 989 aa11.99□□□□□ -0.49
PALB2-201ENST00000261584 KINO60870 393 aaKnown RBP11.99□□□□□ -0.49
PALB2-201ENST00000261584 ZNF165P49910 485 aa11.99□□□□□ -0.49
PALB2-201ENST00000261584 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
PALB2-201ENST00000261584 PTPN21Q16825 1174 aa11.99□□□□□ -0.49
PALB2-201ENST00000261584 NUP160Q12769 1436 aa11.99□□□□□ -0.49
PALB2-201ENST00000261584 RNF20Q5VTR2 975 aa11.99□□□□□ -0.49
PALB2-201ENST00000261584 ZNF530Q6P9A1 599 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms