RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FILIP1Q7Z7B0 1213 aa14.21□□□□□ -0.13
COL8A1-201ENST00000261037 ZSCAN31Q96LW9 406 aaPredicted RBP14.21□□□□□ -0.13
COL8A1-201ENST00000261037 UPF3BQ9BZI7 483 aaKnown RBP14.21□□□□□ -0.13
COL8A1-201ENST00000261037 WDR97A6NE52 1622 aa14.21□□□□□ -0.13
COL8A1-201ENST00000261037 FCHSD2O94868 740 aa14.21□□□□□ -0.14
COL8A1-201ENST00000261037 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 DHX8Q14562 1220 aaKnown RBP14.2□□□□□ -0.14
COL8A1-201ENST00000261037 BOLA2Q9H3K6 86 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 SSR1P43307 286 aaKnown RBP14.2□□□□□ -0.14
COL8A1-201ENST00000261037 CAMSAP2Q08AD1 1489 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
COL8A1-201ENST00000261037 UQCRHLA0A096LP55 91 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 UQCRHP07919 91 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 MAP3K1Q13233 1512 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 ATAD2Q6PL18 1390 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 SYCE3A1L190 88 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 CFAP45Q9UL16 551 aa14.2□□□□□ -0.14
COL8A1-201ENST00000261037 LUC7LQ9NQ29 371 aaKnown RBP14.19□□□□□ -0.14
COL8A1-201ENST00000261037 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
COL8A1-201ENST00000261037 PTPN23Q9H3S7 1636 aa14.19□□□□□ -0.14
COL8A1-201ENST00000261037 GUCY1B3Q02153 619 aa14.19□□□□□ -0.14
COL8A1-201ENST00000261037 SLFN5Q08AF3 891 aa14.19□□□□□ -0.14
COL8A1-201ENST00000261037 BMP2KQ9NSY1 1161 aaPredicted RBP14.19□□□□□ -0.14
COL8A1-201ENST00000261037 MX1P20591 662 aa14.19□□□□□ -0.14
COL8A1-201ENST00000261037 CALRP27797 417 aaKnown RBP14.19□□□□□ -0.14
COL8A1-201ENST00000261037 EIF5P55010 431 aaKnown RBP14.19□□□□□ -0.14
COL8A1-201ENST00000261037 F6X3S4 739 aa14.18□□□□□ -0.14
COL8A1-201ENST00000261037 STARD3NLO95772 234 aa14.18□□□□□ -0.14
COL8A1-201ENST00000261037 POLR3DP05423 398 aaPredicted RBP14.18□□□□□ -0.14
COL8A1-201ENST00000261037 KIAA1328Q86T90 577 aa14.18□□□□□ -0.14
COL8A1-201ENST00000261037 TMOD3Q9NYL9 352 aa14.18□□□□□ -0.14
COL8A1-201ENST00000261037 LRRFIP2Q9Y608 721 aaKnown RBP14.18□□□□□ -0.14
COL8A1-201ENST00000261037 LARP6Q9BRS8 491 aaKnown RBP14.18□□□□□ -0.14
COL8A1-201ENST00000261037 NAIPQ13075 1403 aa14.18□□□□□ -0.14
COL8A1-201ENST00000261037 KRT32Q14532 448 aa14.18□□□□□ -0.14
COL8A1-201ENST00000261037 NME9Q86XW9 330 aa14.18□□□□□ -0.14
COL8A1-201ENST00000261037 RPAP2Q8IXW5 612 aaPredicted RBP14.17□□□□□ -0.14
COL8A1-201ENST00000261037 WASF1Q92558 559 aa14.17□□□□□ -0.14
COL8A1-201ENST00000261037 CCDC8Q9H0W5 538 aaPredicted RBP14.17□□□□□ -0.14
COL8A1-201ENST00000261037 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
COL8A1-201ENST00000261037 CD109Q6YHK3 1445 aa14.17□□□□□ -0.14
COL8A1-201ENST00000261037 MTERF4Q7Z6M4 381 aaKnown RBP14.17□□□□□ -0.14
COL8A1-201ENST00000261037 CCDC82Q8N4S0 544 aa14.17□□□□□ -0.14
COL8A1-201ENST00000261037 POGZQ7Z3K3 1410 aa14.17□□□□□ -0.14
COL8A1-201ENST00000261037 ANKIB1Q9P2G1 1089 aa14.17□□□□□ -0.14
COL8A1-201ENST00000261037 RPGRIP1LQ68CZ1 1315 aa14.17□□□□□ -0.14
COL8A1-201ENST00000261037 C20orf194Q5TEA3 1177 aa14.17□□□□□ -0.14
COL8A1-201ENST00000261037 HMGN5P82970 282 aaKnown RBP14.16□□□□□ -0.14
COL8A1-201ENST00000261037 MPRIPQ6WCQ1 1025 aa14.16□□□□□ -0.14
COL8A1-201ENST00000261037 CFAP100Q494V2 611 aa14.16□□□□□ -0.14
COL8A1-201ENST00000261037 SEC63Q9UGP8 760 aaKnown RBP14.16□□□□□ -0.14
COL8A1-201ENST00000261037 IFIT1P09914 478 aaKnown RBP14.16□□□□□ -0.14
COL8A1-201ENST00000261037 CRACR2BQ8N4Y2 399 aaPredicted RBP14.16□□□□□ -0.14
COL8A1-201ENST00000261037 TMX1Q9H3N1 280 aa14.16□□□□□ -0.14
COL8A1-201ENST00000261037 KLHL10Q6JEL2 608 aa14.16□□□□□ -0.14
COL8A1-201ENST00000261037 ZPR1O75312 459 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 SLC4A8Q2Y0W8 1093 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 KIF1BPQ96EK5 621 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 EPB41L2O43491 1005 aaKnown RBP14.15□□□□□ -0.14
COL8A1-201ENST00000261037 MCM4P33991 863 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 MAP3K11Q16584 847 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 MKNK2Q9HBH9 465 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 SMTNL1A8MU46 457 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 NEBLO76041 1014 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 TAF3Q5VWG9 929 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 ADAMTS2O95450 1211 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 CAVIN4Q5BKX8 364 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 CEP131Q9UPN4 1083 aa14.15□□□□□ -0.14
COL8A1-201ENST00000261037 CCDC66A2RUB6 948 aa14.14□□□□□ -0.15
COL8A1-201ENST00000261037 TXLNBQ8N3L3 684 aa14.14□□□□□ -0.15
COL8A1-201ENST00000261037 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
COL8A1-201ENST00000261037 HSP90AB3PQ58FF7 597 aa14.14□□□□□ -0.15
COL8A1-201ENST00000261037 CCDC102AQ96A19 550 aa14.14□□□□□ -0.15
COL8A1-201ENST00000261037 ERLIN1O75477 346 aa14.14□□□□□ -0.15
COL8A1-201ENST00000261037 TAF7Q15545 349 aaPredicted RBP14.14□□□□□ -0.15
COL8A1-201ENST00000261037 TMOD2Q9NZR1 351 aa14.14□□□□□ -0.15
COL8A1-201ENST00000261037 AKAP2Q9Y2D5 859 aa14.14□□□□□ -0.15
COL8A1-201ENST00000261037 RANBP6O60518 1105 aaKnown RBP14.14□□□□□ -0.15
COL8A1-201ENST00000261037 ZRSR2Q15696 482 aaKnown RBP14.14□□□□□ -0.15
COL8A1-201ENST00000261037 DZIP1Q86YF9 867 aaKnown RBP14.13□□□□□ -0.15
COL8A1-201ENST00000261037 KIAA0754O94854 1291 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 SSH1Q8WYL5 1049 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 ADGRL1O94910 1474 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 TAF4BQ92750 862 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 NAPBQ9H115 298 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 ABCC5O15440 1437 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 CCDC96Q2M329 555 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 KCNH5Q8NCM2 988 aa14.13□□□□□ -0.15
COL8A1-201ENST00000261037 SCLT1Q96NL6 688 aa14.12□□□□□ -0.15
COL8A1-201ENST00000261037 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
COL8A1-201ENST00000261037 RAB11FIP3O75154 756 aa14.12□□□□□ -0.15
COL8A1-201ENST00000261037 LARP1Q6PKG0 1096 aaKnown RBP14.12□□□□□ -0.15
COL8A1-201ENST00000261037 CCDC144CPQ8IYA2 1237 aa14.12□□□□□ -0.15
COL8A1-201ENST00000261037 ERICH4A6NGS2 130 aa14.12□□□□□ -0.15
COL8A1-201ENST00000261037 GPTP24298 496 aa14.12□□□□□ -0.15
COL8A1-201ENST00000261037 DNA2P51530 1060 aa14.12□□□□□ -0.15
COL8A1-201ENST00000261037 ZNF652Q9Y2D9 606 aa14.12□□□□□ -0.15
COL8A1-201ENST00000261037 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms