RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 C8orf58Q8NAV2 365 aa17.98■□□□□ 0.47
MSI1-201ENST00000257552 DCTPP1Q9H773 170 aa17.98■□□□□ 0.47
MSI1-201ENST00000257552 A0A0U1RQG5 324 aaPredicted RBP17.98■□□□□ 0.47
MSI1-201ENST00000257552 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
MSI1-201ENST00000257552 BRPF1P55201 1214 aaPredicted RBP17.97■□□□□ 0.47
MSI1-201ENST00000257552 ABCC4O15439 1325 aa17.97■□□□□ 0.47
MSI1-201ENST00000257552 MAP2P11137 1827 aaKnown RBP17.97■□□□□ 0.47
MSI1-201ENST00000257552 NFE2L2Q16236 605 aa17.97■□□□□ 0.47
MSI1-201ENST00000257552 TSPY26PQ9H489 355 aa17.97■□□□□ 0.47
MSI1-201ENST00000257552 TECPR2O15040 1411 aa17.97■□□□□ 0.47
MSI1-201ENST00000257552 C14orf37Q86TY3 774 aa17.97■□□□□ 0.47
MSI1-201ENST00000257552 ZNF428Q96B54 188 aa17.97■□□□□ 0.47
MSI1-201ENST00000257552 KIF20BQ96Q89 1820 aa17.96■□□□□ 0.47
MSI1-201ENST00000257552 SIRT1Q96EB6 747 aa17.96■□□□□ 0.47
MSI1-201ENST00000257552 EIF4A2Q14240 407 aaKnown RBP17.95■□□□□ 0.46
MSI1-201ENST00000257552 TMX3Q96JJ7 454 aa17.95■□□□□ 0.46
MSI1-201ENST00000257552 CCDC94Q9BW85 323 aaPredicted RBP17.95■□□□□ 0.46
MSI1-201ENST00000257552 MBD3O95983 291 aa17.95■□□□□ 0.46
MSI1-201ENST00000257552 CBX1P83916 185 aa17.94■□□□□ 0.46
MSI1-201ENST00000257552 API5Q9BZZ5 524 aaKnown RBP17.94■□□□□ 0.46
MSI1-201ENST00000257552 REC8O95072 547 aa17.94■□□□□ 0.46
MSI1-201ENST00000257552 GNAI1P63096 354 aa17.94■□□□□ 0.46
MSI1-201ENST00000257552 TTC12Q9H892 705 aaPredicted RBP17.94■□□□□ 0.46
MSI1-201ENST00000257552 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.94■□□□□ 0.46
MSI1-201ENST00000257552 ANKRD26Q9UPS8 1709 aa17.93■□□□□ 0.46
MSI1-201ENST00000257552 GADD45BO75293 160 aaPredicted RBP17.93■□□□□ 0.46
MSI1-201ENST00000257552 CFAP44Q96MT7 982 aa17.93■□□□□ 0.46
MSI1-201ENST00000257552 USP25Q9UHP3 1055 aa17.93■□□□□ 0.46
MSI1-201ENST00000257552 MYRIPQ8NFW9 859 aa17.93■□□□□ 0.46
MSI1-201ENST00000257552 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
MSI1-201ENST00000257552 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
MSI1-201ENST00000257552 PTCH1Q13635 1447 aa17.92■□□□□ 0.46
MSI1-201ENST00000257552 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
MSI1-201ENST00000257552 TBX22Q9Y458 520 aa17.92■□□□□ 0.46
MSI1-201ENST00000257552 ERC2O15083 957 aa17.92■□□□□ 0.46
MSI1-201ENST00000257552 PLCB2Q00722 1185 aa17.92■□□□□ 0.46
MSI1-201ENST00000257552 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
MSI1-201ENST00000257552 MCM10Q7L590 875 aa17.92■□□□□ 0.46
MSI1-201ENST00000257552 PLEKHG3A1L390 1219 aa17.91■□□□□ 0.46
MSI1-201ENST00000257552 ZNF710Q8N1W2 664 aa17.91■□□□□ 0.46
MSI1-201ENST00000257552 NOLC1Q14978 699 aaKnown RBP eCLIP17.9■□□□□ 0.46
MSI1-201ENST00000257552 LTV1Q96GA3 475 aaPredicted RBP17.9■□□□□ 0.46
MSI1-201ENST00000257552 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
MSI1-201ENST00000257552 C3P01024 1663 aa17.9■□□□□ 0.46
MSI1-201ENST00000257552 BRD1O95696 1058 aa17.9■□□□□ 0.46
MSI1-201ENST00000257552 NLRP6P59044 892 aa17.9■□□□□ 0.46
MSI1-201ENST00000257552 ANKRD44Q8N8A2 993 aa17.9■□□□□ 0.46
MSI1-201ENST00000257552 MIS18AQ9NYP9 233 aa17.89■□□□□ 0.45
MSI1-201ENST00000257552 USP6P35125 1406 aa17.89■□□□□ 0.45
MSI1-201ENST00000257552 FOXO3O43524 673 aa17.89■□□□□ 0.45
MSI1-201ENST00000257552 ZSCAN20P17040 1043 aaPredicted RBP17.89■□□□□ 0.45
MSI1-201ENST00000257552 CEP85Q6P2H3 762 aa17.89■□□□□ 0.45
MSI1-201ENST00000257552 SYAP1Q96A49 352 aaPredicted RBP17.88■□□□□ 0.45
MSI1-201ENST00000257552 AATKQ6ZMQ8 1374 aa17.88■□□□□ 0.45
MSI1-201ENST00000257552 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
MSI1-201ENST00000257552 AMPHP49418 695 aa17.88■□□□□ 0.45
MSI1-201ENST00000257552 PALD1Q9ULE6 856 aa17.88■□□□□ 0.45
MSI1-201ENST00000257552 DMTNQ08495 405 aa17.87■□□□□ 0.45
MSI1-201ENST00000257552 PPP4R3BQ5MIZ7 849 aa17.87■□□□□ 0.45
MSI1-201ENST00000257552 USP48Q86UV5 1035 aa17.87■□□□□ 0.45
MSI1-201ENST00000257552 MEIS3Q99687 375 aa17.87■□□□□ 0.45
MSI1-201ENST00000257552 UPF3BQ9BZI7 483 aaKnown RBP17.87■□□□□ 0.45
MSI1-201ENST00000257552 CDK12Q9NYV4 1490 aaPredicted RBP17.87■□□□□ 0.45
MSI1-201ENST00000257552 ADCY5O95622 1261 aa17.87■□□□□ 0.45
MSI1-201ENST00000257552 PIBF1Q8WXW3 757 aa17.86■□□□□ 0.45
MSI1-201ENST00000257552 SPDYE4A6NLX3 237 aa17.86■□□□□ 0.45
MSI1-201ENST00000257552 ZNF853P0CG23 659 aa17.86■□□□□ 0.45
MSI1-201ENST00000257552 HCLS1P14317 486 aaPredicted RBP17.85■□□□□ 0.45
MSI1-201ENST00000257552 ATP2B3Q16720 1220 aa17.85■□□□□ 0.45
MSI1-201ENST00000257552 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
MSI1-201ENST00000257552 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
MSI1-201ENST00000257552 FER1L4A9Z1Z3 1794 aa17.85■□□□□ 0.45
MSI1-201ENST00000257552 ANO2Q9NQ90 1003 aa17.85■□□□□ 0.45
MSI1-201ENST00000257552 PRIMPOLQ96LW4 560 aa17.84■□□□□ 0.45
MSI1-201ENST00000257552 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
MSI1-201ENST00000257552 KNDC1Q76NI1 1749 aa17.83■□□□□ 0.45
MSI1-201ENST00000257552 HMGN5P82970 282 aaKnown RBP17.83■□□□□ 0.45
MSI1-201ENST00000257552 PHF14O94880 888 aa17.83■□□□□ 0.44
MSI1-201ENST00000257552 IGSF3O75054 1194 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 PDE1AP54750 535 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 RILPL2Q969X0 211 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 SLC4A10Q6U841 1118 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 ANKLE2Q86XL3 938 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 DTNBO60941 627 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 EXOC6BQ9Y2D4 811 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 OVOS2A0A0J9YW53 1432 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 OVOS2Q6IE36 1432 aa17.82■□□□□ 0.44
MSI1-201ENST00000257552 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
MSI1-201ENST00000257552 MON2Q7Z3U7 1717 aa17.81■□□□□ 0.44
MSI1-201ENST00000257552 ARHGAP23Q9P227 1491 aa17.81■□□□□ 0.44
MSI1-201ENST00000257552 TRIM6-TRIM34B2RNG4 842 aa17.81■□□□□ 0.44
MSI1-201ENST00000257552 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
MSI1-201ENST00000257552 CUL4AQ13619 759 aa17.81■□□□□ 0.44
MSI1-201ENST00000257552 USHBP1Q8N6Y0 703 aa17.81■□□□□ 0.44
MSI1-201ENST00000257552 LARP6Q9BRS8 491 aaKnown RBP17.81■□□□□ 0.44
MSI1-201ENST00000257552 ATP10DQ9P241 1426 aa17.8■□□□□ 0.44
MSI1-201ENST00000257552 UTP14CQ5TAP6 766 aaKnown RBP17.8■□□□□ 0.44
MSI1-201ENST00000257552 LMOD2Q6P5Q4 547 aa17.8■□□□□ 0.44
MSI1-201ENST00000257552 SLIT1O75093 1534 aa17.8■□□□□ 0.44
MSI1-201ENST00000257552 MSH6P52701 1360 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms