RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 RTN4Q9NQC3 1192 aaKnown RBP20.48■□□□□ 0.87
UBQLN1-201ENST00000257468 ADGRL3Q9HAR2 1447 aa20.47■□□□□ 0.87
UBQLN1-201ENST00000257468 LGR6Q9HBX8 967 aa20.47■□□□□ 0.87
UBQLN1-201ENST00000257468 TSHZ3Q63HK5 1081 aa20.47■□□□□ 0.87
UBQLN1-201ENST00000257468 PNMA6EA0A0J9YXQ4 647 aa20.46■□□□□ 0.87
UBQLN1-201ENST00000257468 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
UBQLN1-201ENST00000257468 PHAXQ9H814 394 aaKnown RBP20.46■□□□□ 0.87
UBQLN1-201ENST00000257468 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
UBQLN1-201ENST00000257468 K7ELQ4 463 aaPredicted RBP20.44■□□□□ 0.86
UBQLN1-201ENST00000257468 USP26Q9BXU7 913 aa20.44■□□□□ 0.86
UBQLN1-201ENST00000257468 EIF2S2P20042 333 aaKnown RBP20.43■□□□□ 0.86
UBQLN1-201ENST00000257468 GZF1Q9H116 711 aaPredicted RBP20.43■□□□□ 0.86
UBQLN1-201ENST00000257468 LRRFIP2Q9Y608 721 aaKnown RBP20.43■□□□□ 0.86
UBQLN1-201ENST00000257468 CEMIPQ8WUJ3 1361 aa20.43■□□□□ 0.86
UBQLN1-201ENST00000257468 KCNQ3O43525 872 aa20.43■□□□□ 0.86
UBQLN1-201ENST00000257468 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
UBQLN1-201ENST00000257468 NPHP4O75161 1426 aaPredicted RBP20.42■□□□□ 0.86
UBQLN1-201ENST00000257468 GNAI3P08754 354 aa20.42■□□□□ 0.86
UBQLN1-201ENST00000257468 PDE1AP54750 535 aa20.42■□□□□ 0.86
UBQLN1-201ENST00000257468 LMOD2Q6P5Q4 547 aa20.42■□□□□ 0.86
UBQLN1-201ENST00000257468 TNPO1Q92973 898 aaKnown RBP20.41■□□□□ 0.86
UBQLN1-201ENST00000257468 ARXQ96QS3 562 aa20.41■□□□□ 0.86
UBQLN1-201ENST00000257468 USP44Q9H0E7 712 aa20.41■□□□□ 0.86
UBQLN1-201ENST00000257468 BABAM1Q9NWV8 329 aa20.41■□□□□ 0.86
UBQLN1-201ENST00000257468 CACNA1FO60840 1977 aa20.4■□□□□ 0.86
UBQLN1-201ENST00000257468 MED1Q15648 1581 aaPredicted RBP20.4■□□□□ 0.86
UBQLN1-201ENST00000257468 EIF4A1P60842 406 aaKnown RBP20.39■□□□□ 0.86
UBQLN1-201ENST00000257468 ATP8B2P98198 1209 aa20.39■□□□□ 0.86
UBQLN1-201ENST00000257468 MPRIPQ6WCQ1 1025 aa20.39■□□□□ 0.86
UBQLN1-201ENST00000257468 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.86
UBQLN1-201ENST00000257468 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.86
UBQLN1-201ENST00000257468 ANXA1P04083 346 aa20.39■□□□□ 0.85
UBQLN1-201ENST00000257468 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
UBQLN1-201ENST00000257468 LRRCC1Q9C099 1032 aa20.39■□□□□ 0.85
UBQLN1-201ENST00000257468 TRAK2O60296 914 aa20.38■□□□□ 0.85
UBQLN1-201ENST00000257468 GCP02774 474 aa20.38■□□□□ 0.85
UBQLN1-201ENST00000257468 CASC1Q6TDU7 716 aa20.38■□□□□ 0.85
UBQLN1-201ENST00000257468 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
UBQLN1-201ENST00000257468 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
UBQLN1-201ENST00000257468 PXDNQ92626 1479 aa20.38■□□□□ 0.85
UBQLN1-201ENST00000257468 SOS1Q07889 1333 aaPredicted RBP20.38■□□□□ 0.85
UBQLN1-201ENST00000257468 SALL3Q9BXA9 1300 aa20.38■□□□□ 0.85
UBQLN1-201ENST00000257468 KDM3BQ7LBC6 1761 aa20.37■□□□□ 0.85
UBQLN1-201ENST00000257468 RABEP1Q15276 862 aa20.37■□□□□ 0.85
UBQLN1-201ENST00000257468 PXDNLA1KZ92 1463 aa20.37■□□□□ 0.85
UBQLN1-201ENST00000257468 UBTFL1P0CB47 393 aaPredicted RBP20.37■□□□□ 0.85
UBQLN1-201ENST00000257468 RAB3GAP1Q15042 981 aa20.37■□□□□ 0.85
UBQLN1-201ENST00000257468 IBTKQ9P2D0 1353 aaPredicted RBP20.37■□□□□ 0.85
UBQLN1-201ENST00000257468 CIZ1Q9ULV3 898 aaPredicted RBP20.36■□□□□ 0.85
UBQLN1-201ENST00000257468 LMO7Q8WWI1 1683 aa20.36■□□□□ 0.85
UBQLN1-201ENST00000257468 ARHGEF25Q86VW2 580 aa20.36■□□□□ 0.85
UBQLN1-201ENST00000257468 PHRF1Q9P1Y6 1649 aaKnown RBP20.36■□□□□ 0.85
UBQLN1-201ENST00000257468 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
UBQLN1-201ENST00000257468 MX1P20591 662 aa20.35■□□□□ 0.85
UBQLN1-201ENST00000257468 TEFQ10587 303 aa20.35■□□□□ 0.85
UBQLN1-201ENST00000257468 TUBGCP6Q96RT7 1819 aa20.35■□□□□ 0.85
UBQLN1-201ENST00000257468 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
UBQLN1-201ENST00000257468 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
UBQLN1-201ENST00000257468 ERC2O15083 957 aa20.34■□□□□ 0.85
UBQLN1-201ENST00000257468 ANKRD24Q8TF21 1146 aa20.34■□□□□ 0.85
UBQLN1-201ENST00000257468 IL1RAPL2Q9NP60 686 aa20.34■□□□□ 0.85
UBQLN1-201ENST00000257468 DDX11L8A8MPP1 907 aa20.33■□□□□ 0.85
UBQLN1-201ENST00000257468 SSFA2P28290 1259 aa20.33■□□□□ 0.85
UBQLN1-201ENST00000257468 SRCIN1Q9C0H9 1055 aa20.33■□□□□ 0.85
UBQLN1-201ENST00000257468 NBPF7P0C2Y1 421 aaPredicted RBP20.33■□□□□ 0.84
UBQLN1-201ENST00000257468 PLEKHO1Q53GL0 409 aaPredicted RBP20.33■□□□□ 0.84
UBQLN1-201ENST00000257468 AK9Q5TCS8 1911 aa20.33■□□□□ 0.84
UBQLN1-201ENST00000257468 SLIT3O75094 1523 aa20.32■□□□□ 0.84
UBQLN1-201ENST00000257468 PI4KAP2A4QPH2 592 aa20.32■□□□□ 0.84
UBQLN1-201ENST00000257468 EIF5BO60841 1220 aaKnown RBP20.32■□□□□ 0.84
UBQLN1-201ENST00000257468 REC8O95072 547 aa20.32■□□□□ 0.84
UBQLN1-201ENST00000257468 PI4KAP1Q8N8J0 262 aa20.32■□□□□ 0.84
UBQLN1-201ENST00000257468 PPP1R42Q7Z4L9 355 aa20.32■□□□□ 0.84
UBQLN1-201ENST00000257468 RILPL2Q969X0 211 aa20.32■□□□□ 0.84
UBQLN1-201ENST00000257468 TRIM6-TRIM34B2RNG4 842 aa20.31■□□□□ 0.84
UBQLN1-201ENST00000257468 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
UBQLN1-201ENST00000257468 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
UBQLN1-201ENST00000257468 PRAMEF22A3QJZ6 481 aa20.3■□□□□ 0.84
UBQLN1-201ENST00000257468 SSH3Q8TE77 659 aa20.3■□□□□ 0.84
UBQLN1-201ENST00000257468 PROSER2Q86WR7 435 aaPredicted RBP20.3■□□□□ 0.84
UBQLN1-201ENST00000257468 NUTM1Q86Y26 1132 aa20.3■□□□□ 0.84
UBQLN1-201ENST00000257468 TRPM3Q9HCF6 1732 aaPredicted RBP20.3■□□□□ 0.84
UBQLN1-201ENST00000257468 C1orf141Q5JVX7 400 aa20.29■□□□□ 0.84
UBQLN1-201ENST00000257468 BEND3Q5T5X7 828 aa20.29■□□□□ 0.84
UBQLN1-201ENST00000257468 KRT28Q7Z3Y7 464 aa20.29■□□□□ 0.84
UBQLN1-201ENST00000257468 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
UBQLN1-201ENST00000257468 RGPD5Q99666 1765 aa20.29■□□□□ 0.84
UBQLN1-201ENST00000257468 ADCY9O60503 1353 aa20.29■□□□□ 0.84
UBQLN1-201ENST00000257468 GBP4Q96PP9 640 aa20.29■□□□□ 0.84
UBQLN1-201ENST00000257468 SURF6O75683 361 aaKnown RBP20.28■□□□□ 0.84
UBQLN1-201ENST00000257468 HOXB7P09629 217 aa20.28■□□□□ 0.84
UBQLN1-201ENST00000257468 PROSER3Q2NL68 480 aa20.28■□□□□ 0.84
UBQLN1-201ENST00000257468 ESYT1Q9BSJ8 1104 aa20.28■□□□□ 0.84
UBQLN1-201ENST00000257468 GOLGA6L3A6NEY3 463 aa20.28■□□□□ 0.84
UBQLN1-201ENST00000257468 SRGAP3O43295 1099 aa20.28■□□□□ 0.84
UBQLN1-201ENST00000257468 AMOTQ4VCS5 1084 aa20.28■□□□□ 0.84
UBQLN1-201ENST00000257468 NCAPD2Q15021 1401 aa20.27■□□□□ 0.84
UBQLN1-201ENST00000257468 FSD2A1L4K1 749 aa20.27■□□□□ 0.84
UBQLN1-201ENST00000257468 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
UBQLN1-201ENST00000257468 L1TD1Q5T7N2 865 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms