RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SLC24A3Q9HC58 644 aa7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 CSB-PGBD3P0DP91 1061 aa7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 NFXL1Q6ZNB6 911 aa7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 CXorf38Q8TB03 319 aa7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 ARHGEF11O15085 1522 aa7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 GBP3Q9H0R5 595 aa7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 RWDD1Q9H446 243 aaPredicted RBP7.9□□□□□ -1.14
PDGFRA-201ENST00000257290 ZBTB17Q13105 803 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 SLMAPQ14BN4 828 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 SH2D4BQ5SQS7 431 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 EP400NLQ6ZTU2 488 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 FAM184BQ9ULE4 1060 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 PEX19P40855 299 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 DHX8Q14562 1220 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 SF3A1Q15459 793 aaKnown RBP7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 CCDC50Q8IVM0 306 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 CEP89Q96ST8 783 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 TRIM4Q9C037 500 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 WWC3Q9ULE0 1092 aa7.9□□□□□ -1.15
PDGFRA-201ENST00000257290 AKNAQ7Z591 1439 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 CCDC146Q8IYE0 955 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 TMTC2Q8N394 836 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 NAIPQ13075 1403 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 SPC24Q8NBT2 197 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 SH3BP1Q9Y3L3 701 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 EID1Q9Y6B2 187 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 BECN2A8MW95 431 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 CA8P35219 290 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 MMS22LQ6ZRQ5 1243 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 CTNNBL1Q8WYA6 563 aaPredicted RBP7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 ERLIN2O94905 339 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 WHAMMP3Q1A5X7 153 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 ST18O60284 1047 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 SART3Q15020 963 aaKnown RBP7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 KLHL10Q6JEL2 608 aa7.89□□□□□ -1.15
PDGFRA-201ENST00000257290 EBAG9O00559 213 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 STK26Q9P289 416 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 ABCC5O15440 1437 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 BAG4O95429 457 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 KIF5BP33176 963 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 RANBP1P43487 201 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 ITSN2Q9NZM3 1697 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 KIF4AO95239 1232 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 TRIM21P19474 475 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 DESP17661 470 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 SYCP1Q15431 976 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 SATB2Q9UPW6 733 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 ATP6V1DQ9Y5K8 247 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 EIF5P55010 431 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 NUCB1Q02818 461 aa7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 RRP15Q9Y3B9 282 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-201ENST00000257290 PRPF4BQ13523 1007 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 RNF187Q5TA31 235 aaPredicted RBP7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 CDKL5O76039 1030 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 RIPK4P57078 832 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 PTPN14Q15678 1187 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 CCDC152Q4G0S7 254 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 AMOTQ4VCS5 1084 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 LRRCC1Q9C099 1032 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 CAGE1Q8TC20 777 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 MYO1CO00159 1063 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 LCA5Q86VQ0 697 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 CEP112Q8N8E3 955 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 GBP7Q8N8V2 638 aaPredicted RBP7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 GOLGA5Q8TBA6 731 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 ITFG2Q969R8 447 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 NAT10Q9H0A0 1025 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 GOLGA6CA6NDK9 693 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 GOLGA6BA6NDN3 693 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 GOLGA6DP0CG33 693 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 CCDC186Q7Z3E2 898 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 PDILTQ8N807 584 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 GOLGA6AQ9NYA3 693 aa7.87□□□□□ -1.15
PDGFRA-201ENST00000257290 NUP160Q12769 1436 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 CCDC38Q502W7 563 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 BCL2L12Q9HB09 334 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 SCAPERQ9BY12 1400 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 NUP153P49790 1475 aaKnown RBP7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 TARBP1Q13395 1621 aaKnown RBP7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 ST20-MTHFSA0A0A6YYL1 179 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 ATP2B1P20020 1258 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 HSPA4P34932 840 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 SAFB2Q14151 953 aaKnown RBP eCLIP7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 SAAL1Q96ER3 474 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 CAND2O75155 1236 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 MAP9Q49MG5 647 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 CEP135Q66GS9 1140 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 AFAP1Q8N556 730 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 HNRNPH2P55795 449 aaKnown RBP7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 RAD51AP2Q09MP3 1159 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 CEP128Q6ZU80 1094 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 SMTNL1A8MU46 457 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 REC8O95072 547 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 PSMD7P51665 324 aa7.86□□□□□ -1.15
PDGFRA-201ENST00000257290 TERF2Q15554 542 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms