RNA–Protein interactions for RNA: ENST00000255531.8

PCDH19-201, Transcript of protocadherin 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH19, Length 7,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-201ENST00000255531 BUB1BO60566 1050 aaPredicted RBP11.11□□□□□ -0.63
PCDH19-201ENST00000255531 ATRIPQ8WXE1 791 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 NAA16Q6N069 864 aaPredicted RBP11.11□□□□□ -0.63
PCDH19-201ENST00000255531 DNAJC8O75937 253 aaPredicted RBP11.11□□□□□ -0.63
PCDH19-201ENST00000255531 TRIM22Q8IYM9 498 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 CCDC170Q8IYT3 715 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 TERF2IPQ9NYB0 399 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 DDX58O95786 925 aaKnown RBP11.11□□□□□ -0.63
PCDH19-201ENST00000255531 KIF15Q9NS87 1388 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 CACNA2D4Q7Z3S7 1137 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 SRRTQ9BXP5 876 aaKnown RBP11.11□□□□□ -0.63
PCDH19-201ENST00000255531 CCDC171Q6TFL3 1326 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 MATR3P43243 847 aaKnown RBP eCLIP11.11□□□□□ -0.63
PCDH19-201ENST00000255531 LRRC45Q96CN5 670 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 ODF2LQ9ULJ1 636 aa11.11□□□□□ -0.63
PCDH19-201ENST00000255531 NOL7Q9UMY1 257 aaKnown RBP11.11□□□□□ -0.63
PCDH19-201ENST00000255531 TRIM7Q9C029 511 aa11.1□□□□□ -0.63
PCDH19-201ENST00000255531 SIN3AQ96ST3 1273 aa11.1□□□□□ -0.63
PCDH19-201ENST00000255531 MYCBPQ99417 103 aaPredicted RBP11.1□□□□□ -0.63
PCDH19-201ENST00000255531 TOP1P11387 765 aaKnown RBP11.1□□□□□ -0.63
PCDH19-201ENST00000255531 LRRC43Q8N309 656 aa11.1□□□□□ -0.63
PCDH19-201ENST00000255531 CFDP1Q9UEE9 299 aaPredicted RBP11.1□□□□□ -0.63
PCDH19-201ENST00000255531 IFI16Q16666 785 aaKnown RBP11.09□□□□□ -0.63
PCDH19-201ENST00000255531 CCDC57Q2TAC2 916 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 CCDC150Q8NCX0 1101 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 ATP2B1P20020 1258 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 MORC4Q8TE76 937 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 PPP1R12CQ9BZL4 782 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
PCDH19-201ENST00000255531 PLVAPQ9BX97 442 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.09□□□□□ -0.63
PCDH19-201ENST00000255531 MPNDQ8N594 471 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 RAB3IPQ96QF0 476 aaPredicted RBP11.09□□□□□ -0.63
PCDH19-201ENST00000255531 MAP2K2P36507 400 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 EIF2AQ9BY44 585 aaKnown RBP11.09□□□□□ -0.63
PCDH19-201ENST00000255531 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
PCDH19-201ENST00000255531 CALCOCO2Q13137 446 aa11.08□□□□□ -0.63
PCDH19-201ENST00000255531 ERCC6LQ2NKX8 1250 aa11.08□□□□□ -0.63
PCDH19-201ENST00000255531 POTEDQ86YR6 584 aa11.08□□□□□ -0.63
PCDH19-201ENST00000255531 SPATA32Q96LK8 384 aa11.08□□□□□ -0.63
PCDH19-201ENST00000255531 NEK4P51957 841 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 WASHC4Q2M389 1173 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 C16orf45Q96MC5 204 aaPredicted RBP11.08□□□□□ -0.64
PCDH19-201ENST00000255531 CEP131Q9UPN4 1083 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 PFDN1O60925 122 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 DIXDC1Q155Q3 683 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 ALDH3A1P30838 453 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 SAMD15Q9P1V8 674 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 SATB2Q9UPW6 733 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 COG6Q9Y2V7 657 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 CDKL5O76039 1030 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 ACTN2P35609 894 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 CPLX4Q7Z7G2 160 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 API5Q9BZZ5 524 aaKnown RBP11.08□□□□□ -0.64
PCDH19-201ENST00000255531 MACROD2A1Z1Q3 448 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 CCDC129Q6ZRS4 1044 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 VCX3AQ9NNX9 186 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 CCDC38Q502W7 563 aa11.08□□□□□ -0.64
PCDH19-201ENST00000255531 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
PCDH19-201ENST00000255531 GCKP35557 465 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 SNW1Q13573 536 aaKnown RBP11.07□□□□□ -0.64
PCDH19-201ENST00000255531 NGEFQ8N5V2 710 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 DRC1Q96MC2 740 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 NCAPGQ9BPX3 1015 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 RASAL2Q9UJF2 1139 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 SF3B2Q13435 895 aaKnown RBP11.07□□□□□ -0.64
PCDH19-201ENST00000255531 TSG101Q99816 390 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 XAB2Q9HCS7 855 aaKnown RBP11.07□□□□□ -0.64
PCDH19-201ENST00000255531 MKL2Q9ULH7 1088 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 NEDD9Q14511 834 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 CCDC77Q9BR77 488 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
PCDH19-201ENST00000255531 MRPS9P82933 396 aaKnown RBP11.07□□□□□ -0.64
PCDH19-201ENST00000255531 KIAA0753Q2KHM9 967 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 C1orf141Q5JVX7 400 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 SPTY2D1Q68D10 685 aaPredicted RBP11.07□□□□□ -0.64
PCDH19-201ENST00000255531 CNGA1P29973 690 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 NBPF11Q86T75 865 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 HVCN1Q96D96 273 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 GBP5Q96PP8 586 aa11.07□□□□□ -0.64
PCDH19-201ENST00000255531 NDC80O14777 642 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 GIMAP4Q9NUV9 329 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 ANO10Q9NW15 660 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 KIF20AO95235 890 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 YEATS4O95619 227 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 TMCO4Q5TGY1 634 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 USP6NLQ92738 828 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 DACT3Q96B18 629 aaPredicted RBP11.06□□□□□ -0.64
PCDH19-201ENST00000255531 NUP88Q99567 741 aaPredicted RBP11.06□□□□□ -0.64
PCDH19-201ENST00000255531 CLIP2Q9UDT6 1046 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 RPAINQ86UA6 219 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 CEP85LQ5SZL2 805 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 A6NNZ2 444 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 AMPHP49418 695 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 TUBB8Q3ZCM7 444 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.06□□□□□ -0.64
PCDH19-201ENST00000255531 PLIN1O60240 522 aa11.06□□□□□ -0.64
PCDH19-201ENST00000255531 TBC1D2BQ9UPU7 963 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms