RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 ZSCAN12O43309 604 aa12.83□□□□□ -0.36
DCLK1-201ENST00000255448 IVLP07476 585 aa12.83□□□□□ -0.36
DCLK1-201ENST00000255448 STK3Q13188 491 aa12.83□□□□□ -0.36
DCLK1-201ENST00000255448 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 MICALCLQ6ZW33 695 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 FEZ1Q99689 392 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
DCLK1-201ENST00000255448 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.82□□□□□ -0.36
DCLK1-201ENST00000255448 V9GYY5 206 aaPredicted RBP12.82□□□□□ -0.36
DCLK1-201ENST00000255448 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
DCLK1-201ENST00000255448 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 ERLIN2O94905 339 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 GBP2P32456 591 aaPredicted RBP12.82□□□□□ -0.36
DCLK1-201ENST00000255448 CFAP100Q494V2 611 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 GDPD2Q9HCC8 539 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 ZNHIT6Q9NWK9 470 aaKnown RBP12.82□□□□□ -0.36
DCLK1-201ENST00000255448 CAMSAP2Q08AD1 1489 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 XBP1P17861 261 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 LRSAM1Q6UWE0 723 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
DCLK1-201ENST00000255448 ENOX2Q16206 610 aaKnown RBP12.81□□□□□ -0.36
DCLK1-201ENST00000255448 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 CYP46A1Q9Y6A2 500 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 ATP2B1P20020 1258 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 TMX1Q9H3N1 280 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 KIF4BQ2VIQ3 1234 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 IQCEQ6IPM2 695 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 TBC1D32Q96NH3 1257 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 FCHSD2O94868 740 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 MAP9Q49MG5 647 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
DCLK1-201ENST00000255448 SNW1Q13573 536 aaKnown RBP12.81□□□□□ -0.36
DCLK1-201ENST00000255448 UVSSAQ2YD98 709 aa12.81□□□□□ -0.36
DCLK1-201ENST00000255448 CCDC43Q96MW1 224 aaKnown RBP12.81□□□□□ -0.36
DCLK1-201ENST00000255448 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
DCLK1-201ENST00000255448 CCDC91Q7Z6B0 441 aa12.8□□□□□ -0.36
DCLK1-201ENST00000255448 SRCIN1Q9C0H9 1055 aa12.8□□□□□ -0.36
DCLK1-201ENST00000255448 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
DCLK1-201ENST00000255448 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
DCLK1-201ENST00000255448 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
DCLK1-201ENST00000255448 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
DCLK1-201ENST00000255448 NUDT16Q96DE0 195 aaKnown RBP12.8□□□□□ -0.36
DCLK1-201ENST00000255448 PCF11O94913 1555 aaKnown RBP12.8□□□□□ -0.36
DCLK1-201ENST00000255448 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
DCLK1-201ENST00000255448 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
DCLK1-201ENST00000255448 NEMFO60524 1076 aa12.8□□□□□ -0.36
DCLK1-201ENST00000255448 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
DCLK1-201ENST00000255448 CKAP2LQ8IYA6 745 aa12.8□□□□□ -0.36
DCLK1-201ENST00000255448 SLC3A2P08195 630 aaKnown RBP12.79□□□□□ -0.36
DCLK1-201ENST00000255448 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
DCLK1-201ENST00000255448 SMTNL1A8MU46 457 aa12.79□□□□□ -0.36
DCLK1-201ENST00000255448 DENND4BO75064 1496 aaPredicted RBP12.79□□□□□ -0.36
DCLK1-201ENST00000255448 NEFHP12036 1026 aa12.79□□□□□ -0.36
DCLK1-201ENST00000255448 CCDC148Q8NFR7 591 aa12.79□□□□□ -0.36
DCLK1-201ENST00000255448 CAPN2P17655 700 aa12.79□□□□□ -0.36
DCLK1-201ENST00000255448 CCDC158Q5M9N0 1113 aa12.79□□□□□ -0.36
DCLK1-201ENST00000255448 SRRTQ9BXP5 876 aaKnown RBP12.79□□□□□ -0.36
DCLK1-201ENST00000255448 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
DCLK1-201ENST00000255448 U2AF2P26368 475 aaKnown RBP eCLIP12.78□□□□□ -0.36
DCLK1-201ENST00000255448 ZNF397Q8NF99 534 aaPredicted RBP12.78□□□□□ -0.36
DCLK1-201ENST00000255448 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
DCLK1-201ENST00000255448 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
DCLK1-201ENST00000255448 KIF5CO60282 957 aa12.78□□□□□ -0.36
DCLK1-201ENST00000255448 ZSWIM4Q9H7M6 989 aa12.78□□□□□ -0.36
DCLK1-201ENST00000255448 CFAP45Q9UL16 551 aa12.78□□□□□ -0.36
DCLK1-201ENST00000255448 GOLGA6L10A0A0M3HER8 536 aa12.77□□□□□ -0.36
DCLK1-201ENST00000255448 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.36
DCLK1-201ENST00000255448 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.36
DCLK1-201ENST00000255448 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.77□□□□□ -0.36
DCLK1-201ENST00000255448 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.36
DCLK1-201ENST00000255448 FYB1O15117 783 aa12.77□□□□□ -0.37
DCLK1-201ENST00000255448 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
DCLK1-201ENST00000255448 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.37
DCLK1-201ENST00000255448 NSD3Q9BZ95 1437 aa12.77□□□□□ -0.37
DCLK1-201ENST00000255448 ARFGAP3Q9NP61 516 aa12.77□□□□□ -0.37
DCLK1-201ENST00000255448 A0A1B0GUL7 405 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 DACH1Q9UI36 760 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 WDR97A6NE52 1622 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 EPS15P42566 896 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
DCLK1-201ENST00000255448 MCM6Q14566 821 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 ABCC5O15440 1437 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 MAP2K1Q02750 393 aaPredicted RBP12.76□□□□□ -0.37
DCLK1-201ENST00000255448 JMYQ8N9B5 988 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 PTPN23Q9H3S7 1636 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 RAI14Q9P0K7 980 aa12.76□□□□□ -0.37
DCLK1-201ENST00000255448 NFE2L2Q16236 605 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 TTC39AQ5SRH9 613 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 KRBA2Q6ZNG9 492 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 CCDC186Q7Z3E2 898 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 CEP57Q86XR8 500 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 MCM3P25205 808 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 ANO10Q9NW15 660 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
DCLK1-201ENST00000255448 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms