RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 APBA3O96018 575 aa29.92■■■□□ 2.38
APOE-201ENST00000252486 DCTN1Q14203 1278 aa29.92■■■□□ 2.38
APOE-201ENST00000252486 TRIM35Q9UPQ4 493 aa29.92■■■□□ 2.38
APOE-201ENST00000252486 BAG6P46379 1132 aa29.91■■■□□ 2.38
APOE-201ENST00000252486 PTF1AQ7RTS3 328 aa29.91■■■□□ 2.38
APOE-201ENST00000252486 SMARCC1Q92922 1105 aaPredicted RBP29.91■■■□□ 2.38
APOE-201ENST00000252486 CALD1Q05682 793 aaKnown RBP29.9■■■□□ 2.38
APOE-201ENST00000252486 PLSCR1O15162 318 aa29.89■■■□□ 2.38
APOE-201ENST00000252486 SIPA1L3O60292 1781 aaPredicted RBP29.89■■■□□ 2.38
APOE-201ENST00000252486 TAF7Q15545 349 aaPredicted RBP29.87■■■□□ 2.37
APOE-201ENST00000252486 RGPD3A6NKT7 1758 aaPredicted RBP29.87■■■□□ 2.37
APOE-201ENST00000252486 RGPD4Q7Z3J3 1758 aa29.87■■■□□ 2.37
APOE-201ENST00000252486 THUMPD2Q9BTF0 503 aaKnown RBP29.85■■■□□ 2.37
APOE-201ENST00000252486 ATG3Q9NT62 314 aa29.84■■■□□ 2.37
APOE-201ENST00000252486 BABAM1Q9NWV8 329 aa29.84■■■□□ 2.37
APOE-201ENST00000252486 BTBD11A6QL63 1104 aa29.83■■■□□ 2.37
APOE-201ENST00000252486 WWC1Q8IX03 1113 aa29.83■■■□□ 2.37
APOE-201ENST00000252486 ASAP1Q9ULH1 1129 aa29.83■■■□□ 2.37
APOE-201ENST00000252486 PALLDQ8WX93 1383 aa29.82■■■□□ 2.36
APOE-201ENST00000252486 PAPPAQ13219 1627 aa29.82■■■□□ 2.36
APOE-201ENST00000252486 HMGB2P26583 209 aaKnown RBP29.8■■■□□ 2.36
APOE-201ENST00000252486 TTC5Q8N0Z6 440 aa29.8■■■□□ 2.36
APOE-201ENST00000252486 SALL2Q9Y467 1007 aaPredicted RBP29.8■■■□□ 2.36
APOE-201ENST00000252486 WDR63Q8IWG1 891 aa29.79■■■□□ 2.36
APOE-201ENST00000252486 LY75O60449 1722 aa29.79■■■□□ 2.36
APOE-201ENST00000252486 IL16Q14005 1332 aa29.78■■■□□ 2.36
APOE-201ENST00000252486 SENP3-EIF4A1A0A087X0R7 540 aa29.78■■■□□ 2.36
APOE-201ENST00000252486 EN1Q05925 392 aaPredicted RBP29.78■■■□□ 2.36
APOE-201ENST00000252486 SLC27A3Q5K4L6 730 aa29.78■■■□□ 2.36
APOE-201ENST00000252486 ZNF790Q6PG37 636 aa29.78■■■□□ 2.36
APOE-201ENST00000252486 CAMKK2Q96RR4 588 aa29.78■■■□□ 2.36
APOE-201ENST00000252486 DEFB132Q7Z7B7 95 aa29.77■■■□□ 2.36
APOE-201ENST00000252486 SLC39A6Q13433 755 aa29.76■■■□□ 2.35
APOE-201ENST00000252486 CFAP44Q96MT7 982 aa29.76■■■□□ 2.35
APOE-201ENST00000252486 IFT57Q9NWB7 429 aa29.76■■■□□ 2.35
APOE-201ENST00000252486 GNAI1P63096 354 aa29.75■■■□□ 2.35
APOE-201ENST00000252486 TSPYL4Q9UJ04 414 aa29.75■■■□□ 2.35
APOE-201ENST00000252486 LOC102724428A0A0B4J2F2 783 aa29.74■■■□□ 2.35
APOE-201ENST00000252486 SIK1P57059 783 aa29.74■■■□□ 2.35
APOE-201ENST00000252486 TXNRD1Q16881 649 aa29.74■■■□□ 2.35
APOE-201ENST00000252486 ZNF831Q5JPB2 1677 aa29.73■■■□□ 2.35
APOE-201ENST00000252486 KDM3BQ7LBC6 1761 aa29.73■■■□□ 2.35
APOE-201ENST00000252486 UBR2Q8IWV8 1755 aa29.73■■■□□ 2.35
APOE-201ENST00000252486 CHL1O00533 1208 aa29.73■■■□□ 2.35
APOE-201ENST00000252486 EZH2Q15910 746 aaKnown RBP29.73■■■□□ 2.35
APOE-201ENST00000252486 RBM42Q9BTD8 480 aaKnown RBP29.73■■■□□ 2.35
APOE-201ENST00000252486 LAS1LQ9Y4W2 734 aaKnown RBP29.73■■■□□ 2.35
APOE-201ENST00000252486 PTCD1O75127 700 aaKnown RBP29.72■■■□□ 2.35
APOE-201ENST00000252486 HNRNPUQ00839 825 aaKnown RBP eCLIP29.72■■■□□ 2.35
APOE-201ENST00000252486 FMNL2Q96PY5 1086 aa29.72■■■□□ 2.35
APOE-201ENST00000252486 CCNL1Q9UK58 526 aaPredicted RBP29.72■■■□□ 2.35
APOE-201ENST00000252486 ZNF521Q96K83 1311 aa29.71■■■□□ 2.35
APOE-201ENST00000252486 KCPQ6ZWJ8 1503 aa29.71■■■□□ 2.35
APOE-201ENST00000252486 ZNF853P0CG23 659 aa29.71■■■□□ 2.35
APOE-201ENST00000252486 VSIG10Q8N0Z9 540 aa29.71■■■□□ 2.35
APOE-201ENST00000252486 RREB1Q92766 1687 aa29.7■■■□□ 2.35
APOE-201ENST00000252486 PROM2Q8N271 834 aa29.7■■■□□ 2.35
APOE-201ENST00000252486 MIS18AQ9NYP9 233 aa29.7■■■□□ 2.35
APOE-201ENST00000252486 ZNF496Q96IT1 587 aaPredicted RBP29.68■■■□□ 2.34
APOE-201ENST00000252486 HEG1Q9ULI3 1381 aa29.67■■■□□ 2.34
APOE-201ENST00000252486 KCNQ3O43525 872 aa29.67■■■□□ 2.34
APOE-201ENST00000252486 ATP6V1AP38606 617 aa29.67■■■□□ 2.34
APOE-201ENST00000252486 CICQ96RK0 1608 aaPredicted RBP29.67■■■□□ 2.34
APOE-201ENST00000252486 GOLGA2Q08379 1002 aa29.66■■■□□ 2.34
APOE-201ENST00000252486 TEX13AQ9BXU3 409 aaPredicted RBP29.66■■■□□ 2.34
APOE-201ENST00000252486 EIF4A1P60842 406 aaKnown RBP29.65■■■□□ 2.34
APOE-201ENST00000252486 MBIPQ9NS73 344 aa29.65■■■□□ 2.34
APOE-201ENST00000252486 LRRC4BQ9NT99 713 aa29.65■■■□□ 2.34
APOE-201ENST00000252486 MYH16Q9H6N6 1097 aa29.64■■■□□ 2.34
APOE-201ENST00000252486 SLC4A9Q96Q91 983 aa29.63■■■□□ 2.33
APOE-201ENST00000252486 NUP188Q5SRE5 1749 aa29.62■■■□□ 2.33
APOE-201ENST00000252486 SNRPA1P09661 255 aaKnown RBP29.62■■■□□ 2.33
APOE-201ENST00000252486 C5P01031 1676 aa29.61■■■□□ 2.33
APOE-201ENST00000252486 E9PSI1 815 aa29.61■■■□□ 2.33
APOE-201ENST00000252486 TAF1LQ8IZX4 1826 aa29.61■■■□□ 2.33
APOE-201ENST00000252486 ITPK1Q13572 414 aa29.6■■■□□ 2.33
APOE-201ENST00000252486 ZBED9Q6R2W3 1325 aa29.6■■■□□ 2.33
APOE-201ENST00000252486 TJP1Q07157 1748 aa29.59■■■□□ 2.33
APOE-201ENST00000252486 STARD3NLO95772 234 aa29.59■■■□□ 2.33
APOE-201ENST00000252486 KCNQ4P56696 695 aa29.59■■■□□ 2.33
APOE-201ENST00000252486 NBPF14Q5TI25 921 aa29.59■■■□□ 2.33
APOE-201ENST00000252486 DNAJC10Q8IXB1 793 aa29.58■■■□□ 2.33
APOE-201ENST00000252486 COL5A3P25940 1745 aaPredicted RBP29.57■■■□□ 2.32
APOE-201ENST00000252486 GIGYF1O75420 1035 aaPredicted RBP29.57■■■□□ 2.32
APOE-201ENST00000252486 SOS1Q07889 1333 aaPredicted RBP29.56■■■□□ 2.32
APOE-201ENST00000252486 FANCIQ9NVI1 1328 aa29.56■■■□□ 2.32
APOE-201ENST00000252486 HOXB7P09629 217 aa29.56■■■□□ 2.32
APOE-201ENST00000252486 RC3H1Q5TC82 1133 aaKnown RBP29.56■■■□□ 2.32
APOE-201ENST00000252486 LINC00116Q8NCU8 138 aa29.56■■■□□ 2.32
APOE-201ENST00000252486 TSR2Q969E8 191 aaKnown RBP29.56■■■□□ 2.32
APOE-201ENST00000252486 CNTNAP4Q9C0A0 1308 aa29.55■■■□□ 2.32
APOE-201ENST00000252486 C4BP0C0L5 1744 aa29.55■■■□□ 2.32
APOE-201ENST00000252486 SLFN5Q08AF3 891 aa29.55■■■□□ 2.32
APOE-201ENST00000252486 CYP19A1P11511 503 aaPredicted RBP29.54■■■□□ 2.32
APOE-201ENST00000252486 CHMP4AQ9BY43 222 aa29.54■■■□□ 2.32
APOE-201ENST00000252486 SPINK5Q9NQ38 1064 aaPredicted RBP29.54■■■□□ 2.32
APOE-201ENST00000252486 STK32BQ9NY57 414 aa29.54■■■□□ 2.32
APOE-201ENST00000252486 LAMB4A4D0S4 1761 aa29.53■■■□□ 2.32
APOE-201ENST00000252486 AKT1S1Q96B36 256 aa29.52■■■□□ 2.32
APOE-201ENST00000252486 AK7Q96M32 723 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms