RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 DLG5Q8TDM6 1919 aa19■□□□□ 0.63
CNN1-201ENST00000252456 RNMTO43148 476 aaKnown RBP19■□□□□ 0.63
CNN1-201ENST00000252456 CABP4P57796 275 aa19■□□□□ 0.63
CNN1-201ENST00000252456 GAS2L2Q8NHY3 880 aa19■□□□□ 0.63
CNN1-201ENST00000252456 AKT1S1Q96B36 256 aa19■□□□□ 0.63
CNN1-201ENST00000252456 NFATC2IPQ8NCF5 419 aa19■□□□□ 0.63
CNN1-201ENST00000252456 PDGFDQ9GZP0 370 aaPredicted RBP19■□□□□ 0.63
CNN1-201ENST00000252456 STK32BQ9NY57 414 aa19■□□□□ 0.63
CNN1-201ENST00000252456 C4BP0C0L5 1744 aa18.99■□□□□ 0.63
CNN1-201ENST00000252456 PLEKHF1Q96S99 279 aa18.99■□□□□ 0.63
CNN1-201ENST00000252456 SLC52A2Q9HAB3 445 aa18.98■□□□□ 0.63
CNN1-201ENST00000252456 COL5A3P25940 1745 aaPredicted RBP18.98■□□□□ 0.63
CNN1-201ENST00000252456 CICQ96RK0 1608 aaPredicted RBP18.97■□□□□ 0.63
CNN1-201ENST00000252456 LOC102724428A0A0B4J2F2 783 aa18.97■□□□□ 0.63
CNN1-201ENST00000252456 GNAT3A8MTJ3 354 aa18.97■□□□□ 0.63
CNN1-201ENST00000252456 SIK1P57059 783 aa18.97■□□□□ 0.63
CNN1-201ENST00000252456 IL17REQ8NFR9 667 aa18.97■□□□□ 0.63
CNN1-201ENST00000252456 SLC4A9Q96Q91 983 aa18.97■□□□□ 0.63
CNN1-201ENST00000252456 CEMIPQ8WUJ3 1361 aa18.97■□□□□ 0.63
CNN1-201ENST00000252456 UBR2Q8IWV8 1755 aa18.97■□□□□ 0.63
CNN1-201ENST00000252456 UBR3Q6ZT12 1888 aa18.96■□□□□ 0.63
CNN1-201ENST00000252456 TJP1Q07157 1748 aa18.95■□□□□ 0.62
CNN1-201ENST00000252456 ITPK1Q13572 414 aa18.95■□□□□ 0.62
CNN1-201ENST00000252456 KCPQ6ZWJ8 1503 aa18.94■□□□□ 0.62
CNN1-201ENST00000252456 LINC00116Q8NCU8 138 aa18.93■□□□□ 0.62
CNN1-201ENST00000252456 PNPLA7Q6ZV29 1317 aa18.93■□□□□ 0.62
CNN1-201ENST00000252456 MYH14Q7Z406 1995 aaKnown RBP18.91■□□□□ 0.62
CNN1-201ENST00000252456 ATP6V1AP38606 617 aa18.91■□□□□ 0.62
CNN1-201ENST00000252456 CCDC184Q52MB2 194 aa18.91■□□□□ 0.62
CNN1-201ENST00000252456 AMIGO3Q86WK7 504 aa18.91■□□□□ 0.62
CNN1-201ENST00000252456 COL24A1Q17RW2 1714 aa18.91■□□□□ 0.62
CNN1-201ENST00000252456 PTCD1O75127 700 aaKnown RBP18.9■□□□□ 0.62
CNN1-201ENST00000252456 SLC39A6Q13433 755 aa18.9■□□□□ 0.62
CNN1-201ENST00000252456 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
CNN1-201ENST00000252456 TFCP2L1Q9NZI6 479 aa18.89■□□□□ 0.62
CNN1-201ENST00000252456 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
CNN1-201ENST00000252456 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
CNN1-201ENST00000252456 MCM10Q7L590 875 aa18.89■□□□□ 0.61
CNN1-201ENST00000252456 ADAMTS8Q9UP79 889 aa18.89■□□□□ 0.61
CNN1-201ENST00000252456 HTATSF1O43719 755 aaKnown RBP18.88■□□□□ 0.61
CNN1-201ENST00000252456 ZBTB7AO95365 584 aa18.88■□□□□ 0.61
CNN1-201ENST00000252456 TEFQ10587 303 aa18.88■□□□□ 0.61
CNN1-201ENST00000252456 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
CNN1-201ENST00000252456 MAPK8IP3Q9UPT6 1336 aa18.87■□□□□ 0.61
CNN1-201ENST00000252456 NEFMP07197 916 aa18.86■□□□□ 0.61
CNN1-201ENST00000252456 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
CNN1-201ENST00000252456 ANP32CO43423 234 aa18.85■□□□□ 0.61
CNN1-201ENST00000252456 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
CNN1-201ENST00000252456 PTGER2P43116 358 aa18.85■□□□□ 0.61
CNN1-201ENST00000252456 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
CNN1-201ENST00000252456 COL23A1Q86Y22 540 aaPredicted RBP18.85■□□□□ 0.61
CNN1-201ENST00000252456 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
CNN1-201ENST00000252456 RTF1Q92541 710 aaKnown RBP18.85■□□□□ 0.61
CNN1-201ENST00000252456 SPON1Q9HCB6 807 aa18.85■□□□□ 0.61
CNN1-201ENST00000252456 AK7Q96M32 723 aa18.85■□□□□ 0.61
CNN1-201ENST00000252456 SGIP1Q9BQI5 828 aa18.85■□□□□ 0.61
CNN1-201ENST00000252456 MTFR1LQ9H019 292 aa18.85■□□□□ 0.61
CNN1-201ENST00000252456 KDM3BQ7LBC6 1761 aa18.84■□□□□ 0.61
CNN1-201ENST00000252456 ZNF790Q6PG37 636 aa18.84■□□□□ 0.61
CNN1-201ENST00000252456 CNTNAP4Q9C0A0 1308 aa18.84■□□□□ 0.61
CNN1-201ENST00000252456 C4AP0C0L4 1744 aa18.84■□□□□ 0.61
CNN1-201ENST00000252456 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.61
CNN1-201ENST00000252456 GNPATO15228 680 aa18.82■□□□□ 0.6
CNN1-201ENST00000252456 KCNQ3O43525 872 aa18.82■□□□□ 0.6
CNN1-201ENST00000252456 TMPOP42166 694 aaKnown RBP18.82■□□□□ 0.6
CNN1-201ENST00000252456 RC3H1Q5TC82 1133 aaKnown RBP18.82■□□□□ 0.6
CNN1-201ENST00000252456 DNAJC10Q8IXB1 793 aa18.82■□□□□ 0.6
CNN1-201ENST00000252456 SLC16A10Q8TF71 515 aa18.82■□□□□ 0.6
CNN1-201ENST00000252456 RUNDC1Q96C34 613 aa18.82■□□□□ 0.6
CNN1-201ENST00000252456 ZNF496Q96IT1 587 aaPredicted RBP18.82■□□□□ 0.6
CNN1-201ENST00000252456 THUMPD2Q9BTF0 503 aaKnown RBP18.82■□□□□ 0.6
CNN1-201ENST00000252456 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
CNN1-201ENST00000252456 SSFA2P28290 1259 aa18.82■□□□□ 0.6
CNN1-201ENST00000252456 BTBD11A6QL63 1104 aa18.81■□□□□ 0.6
CNN1-201ENST00000252456 TTC5Q8N0Z6 440 aa18.81■□□□□ 0.6
CNN1-201ENST00000252456 VSIG10Q8N0Z9 540 aa18.81■□□□□ 0.6
CNN1-201ENST00000252456 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
CNN1-201ENST00000252456 PHF14O94880 888 aa18.8■□□□□ 0.6
CNN1-201ENST00000252456 CRKLP46109 303 aaKnown RBP18.8■□□□□ 0.6
CNN1-201ENST00000252456 RIPK4P57078 832 aa18.8■□□□□ 0.6
CNN1-201ENST00000252456 FLAD1Q8NFF5 587 aa18.8■□□□□ 0.6
CNN1-201ENST00000252456 RRP7AQ9Y3A4 280 aaKnown RBP18.8■□□□□ 0.6
CNN1-201ENST00000252456 CYP19A1P11511 503 aaPredicted RBP18.79■□□□□ 0.6
CNN1-201ENST00000252456 INTS5Q6P9B9 1019 aaKnown RBP18.79■□□□□ 0.6
CNN1-201ENST00000252456 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
CNN1-201ENST00000252456 TAF7Q15545 349 aaPredicted RBP18.78■□□□□ 0.6
CNN1-201ENST00000252456 RPS6KA4O75676 772 aa18.78■□□□□ 0.6
CNN1-201ENST00000252456 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
CNN1-201ENST00000252456 MIS18AQ9NYP9 233 aa18.77■□□□□ 0.6
CNN1-201ENST00000252456 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
CNN1-201ENST00000252456 RTCBQ9Y3I0 505 aaKnown RBP18.77■□□□□ 0.6
CNN1-201ENST00000252456 MSH5O43196 834 aa18.76■□□□□ 0.59
CNN1-201ENST00000252456 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
CNN1-201ENST00000252456 NEUROD2Q15784 382 aa18.75■□□□□ 0.59
CNN1-201ENST00000252456 CCDC87Q9NVE4 849 aa18.75■□□□□ 0.59
CNN1-201ENST00000252456 LAMB4A4D0S4 1761 aa18.75■□□□□ 0.59
CNN1-201ENST00000252456 MSL1Q68DK7 614 aa18.74■□□□□ 0.59
CNN1-201ENST00000252456 ZBTB1Q9Y2K1 713 aa18.74■□□□□ 0.59
CNN1-201ENST00000252456 PRAMEF22A3QJZ6 481 aa18.74■□□□□ 0.59
CNN1-201ENST00000252456 APAF1O14727 1248 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms