RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SIK1P57059 783 aa32.43■■■□□ 2.78
SDF2L1-201ENST00000248958 NFATC2IPQ8NCF5 419 aa32.43■■■□□ 2.78
SDF2L1-201ENST00000248958 PNNQ9H307 717 aaKnown RBP32.43■■■□□ 2.78
SDF2L1-201ENST00000248958 MAP3K5Q99683 1374 aa32.43■■■□□ 2.78
SDF2L1-201ENST00000248958 GNAT3A8MTJ3 354 aa32.42■■■□□ 2.78
SDF2L1-201ENST00000248958 NEFMP07197 916 aa32.42■■■□□ 2.78
SDF2L1-201ENST00000248958 ZNF831Q5JPB2 1677 aa32.42■■■□□ 2.78
SDF2L1-201ENST00000248958 MRC1P22897 1456 aa32.42■■■□□ 2.78
SDF2L1-201ENST00000248958 PHACTR3Q96KR7 559 aa32.41■■■□□ 2.78
SDF2L1-201ENST00000248958 SLC52A2Q9HAB3 445 aa32.41■■■□□ 2.78
SDF2L1-201ENST00000248958 LGR6Q9HBX8 967 aa32.41■■■□□ 2.78
SDF2L1-201ENST00000248958 TFCP2L1Q9NZI6 479 aa32.39■■■□□ 2.78
SDF2L1-201ENST00000248958 SPON1Q9HCB6 807 aa32.38■■■□□ 2.77
SDF2L1-201ENST00000248958 TUBGCP6Q96RT7 1819 aa32.37■■■□□ 2.77
SDF2L1-201ENST00000248958 ATP6V1AP38606 617 aa32.37■■■□□ 2.77
SDF2L1-201ENST00000248958 C4BP0C0L5 1744 aa32.37■■■□□ 2.77
SDF2L1-201ENST00000248958 SLC16A10Q8TF71 515 aa32.33■■■□□ 2.77
SDF2L1-201ENST00000248958 RBM42Q9BTD8 480 aaKnown RBP32.33■■■□□ 2.77
SDF2L1-201ENST00000248958 PDGFDQ9GZP0 370 aaPredicted RBP32.33■■■□□ 2.77
SDF2L1-201ENST00000248958 PNPLA7Q6ZV29 1317 aa32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 HTATSF1O43719 755 aaKnown RBP32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 TEFQ10587 303 aa32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 FLAD1Q8NFF5 587 aa32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 IL17REQ8NFR9 667 aa32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 RTF1Q92541 710 aaKnown RBP32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 AK7Q96M32 723 aa32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 PLEKHF1Q96S99 279 aa32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 MTFR1LQ9H019 292 aa32.31■■■□□ 2.76
SDF2L1-201ENST00000248958 ITPK1Q13572 414 aa32.29■■■□□ 2.76
SDF2L1-201ENST00000248958 SIPA1L3O60292 1781 aaPredicted RBP32.29■■■□□ 2.76
SDF2L1-201ENST00000248958 CEMIPQ8WUJ3 1361 aa32.29■■■□□ 2.76
SDF2L1-201ENST00000248958 CICQ96RK0 1608 aaPredicted RBP32.29■■■□□ 2.76
SDF2L1-201ENST00000248958 MAPK8IP3Q9UPT6 1336 aa32.28■■■□□ 2.76
SDF2L1-201ENST00000248958 ZBTB7AO95365 584 aa32.28■■■□□ 2.76
SDF2L1-201ENST00000248958 LINC00116Q8NCU8 138 aa32.28■■■□□ 2.76
SDF2L1-201ENST00000248958 COL5A3P25940 1745 aaPredicted RBP32.27■■■□□ 2.76
SDF2L1-201ENST00000248958 UBR3Q6ZT12 1888 aa32.27■■■□□ 2.76
SDF2L1-201ENST00000248958 PTCD1O75127 700 aaKnown RBP32.26■■■□□ 2.75
SDF2L1-201ENST00000248958 SLC4A9Q96Q91 983 aa32.26■■■□□ 2.75
SDF2L1-201ENST00000248958 DLG5Q8TDM6 1919 aa32.26■■■□□ 2.75
SDF2L1-201ENST00000248958 WDR43Q15061 677 aaKnown RBP eCLIP32.25■■■□□ 2.75
SDF2L1-201ENST00000248958 UBR2Q8IWV8 1755 aa32.23■■■□□ 2.75
SDF2L1-201ENST00000248958 RC3H1Q5TC82 1133 aaKnown RBP32.23■■■□□ 2.75
SDF2L1-201ENST00000248958 ATF5Q9Y2D1 282 aaPredicted RBP32.23■■■□□ 2.75
SDF2L1-201ENST00000248958 COL23A1Q86Y22 540 aaPredicted RBP32.22■■■□□ 2.75
SDF2L1-201ENST00000248958 TTC5Q8N0Z6 440 aa32.22■■■□□ 2.75
SDF2L1-201ENST00000248958 TJP1Q07157 1748 aa32.21■■■□□ 2.75
SDF2L1-201ENST00000248958 ANP32CO43423 234 aa32.21■■■□□ 2.75
SDF2L1-201ENST00000248958 SSFA2P28290 1259 aa32.21■■■□□ 2.75
SDF2L1-201ENST00000248958 SLC39A6Q13433 755 aa32.21■■■□□ 2.75
SDF2L1-201ENST00000248958 NFE2L2Q16236 605 aa32.21■■■□□ 2.75
SDF2L1-201ENST00000248958 PPP1R1BQ9UD71 204 aaPredicted RBP32.21■■■□□ 2.75
SDF2L1-201ENST00000248958 CNTNAP4Q9C0A0 1308 aa32.21■■■□□ 2.75
SDF2L1-201ENST00000248958 COL24A1Q17RW2 1714 aa32.2■■■□□ 2.75
SDF2L1-201ENST00000248958 VSIG10Q8N0Z9 540 aa32.2■■■□□ 2.75
SDF2L1-201ENST00000248958 KCPQ6ZWJ8 1503 aa32.2■■■□□ 2.74
SDF2L1-201ENST00000248958 MSH5O43196 834 aa32.19■■■□□ 2.74
SDF2L1-201ENST00000248958 GNPATO15228 680 aa32.18■■■□□ 2.74
SDF2L1-201ENST00000248958 PTGER2P43116 358 aa32.18■■■□□ 2.74
SDF2L1-201ENST00000248958 MCM10Q7L590 875 aa32.18■■■□□ 2.74
SDF2L1-201ENST00000248958 ZNF790Q6PG37 636 aa32.17■■■□□ 2.74
SDF2L1-201ENST00000248958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.16■■■□□ 2.74
SDF2L1-201ENST00000248958 BTBD11A6QL63 1104 aa32.16■■■□□ 2.74
SDF2L1-201ENST00000248958 RTCBQ9Y3I0 505 aaKnown RBP32.16■■■□□ 2.74
SDF2L1-201ENST00000248958 SGIP1Q9BQI5 828 aa32.15■■■□□ 2.74
SDF2L1-201ENST00000248958 PHF14O94880 888 aa32.14■■■□□ 2.74
SDF2L1-201ENST00000248958 POLD1P28340 1107 aa32.14■■■□□ 2.74
SDF2L1-201ENST00000248958 RPS6KA4O75676 772 aa32.13■■■□□ 2.73
SDF2L1-201ENST00000248958 ADRA2BP18089 450 aa32.13■■■□□ 2.73
SDF2L1-201ENST00000248958 DCTN1Q14203 1278 aa32.13■■■□□ 2.73
SDF2L1-201ENST00000248958 MYH14Q7Z406 1995 aaKnown RBP32.13■■■□□ 2.73
SDF2L1-201ENST00000248958 RUNDC1Q96C34 613 aa32.13■■■□□ 2.73
SDF2L1-201ENST00000248958 ADAMTS8Q9UP79 889 aa32.13■■■□□ 2.73
SDF2L1-201ENST00000248958 CRKLP46109 303 aaKnown RBP32.11■■■□□ 2.73
SDF2L1-201ENST00000248958 TRAPPC3LQ5T215 181 aa32.11■■■□□ 2.73
SDF2L1-201ENST00000248958 AMIGO3Q86WK7 504 aa32.11■■■□□ 2.73
SDF2L1-201ENST00000248958 DNAJC10Q8IXB1 793 aa32.11■■■□□ 2.73
SDF2L1-201ENST00000248958 FMNL2Q96PY5 1086 aa32.11■■■□□ 2.73
SDF2L1-201ENST00000248958 LMOD3Q0VAK6 560 aa32.1■■■□□ 2.73
SDF2L1-201ENST00000248958 TAF7Q15545 349 aaPredicted RBP32.1■■■□□ 2.73
SDF2L1-201ENST00000248958 TEX13AQ9BXU3 409 aaPredicted RBP32.1■■■□□ 2.73
SDF2L1-201ENST00000248958 HEG1Q9ULI3 1381 aa32.09■■■□□ 2.73
SDF2L1-201ENST00000248958 RIPK4P57078 832 aa32.09■■■□□ 2.73
SDF2L1-201ENST00000248958 PNISRQ8TF01 805 aaKnown RBP32.09■■■□□ 2.73
SDF2L1-201ENST00000248958 TMPOP42166 694 aaKnown RBP32.08■■■□□ 2.73
SDF2L1-201ENST00000248958 ZNF496Q96IT1 587 aaPredicted RBP32.08■■■□□ 2.73
SDF2L1-201ENST00000248958 ARXQ96QS3 562 aa32.08■■■□□ 2.73
SDF2L1-201ENST00000248958 CYP19A1P11511 503 aaPredicted RBP32.07■■■□□ 2.72
SDF2L1-201ENST00000248958 CCDC146Q8IYE0 955 aa32.07■■■□□ 2.72
SDF2L1-201ENST00000248958 CCDC87Q9NVE4 849 aa32.06■■■□□ 2.72
SDF2L1-201ENST00000248958 STARD3NLO95772 234 aa32.05■■■□□ 2.72
SDF2L1-201ENST00000248958 INTS5Q6P9B9 1019 aaKnown RBP32.05■■■□□ 2.72
SDF2L1-201ENST00000248958 SMIM5Q71RC9 77 aa32.04■■■□□ 2.72
SDF2L1-201ENST00000248958 ARHGEF1Q92888 912 aaKnown RBP32.03■■■□□ 2.72
SDF2L1-201ENST00000248958 RFC4P35249 363 aa32.02■■■□□ 2.72
SDF2L1-201ENST00000248958 KDM3BQ7LBC6 1761 aa32.02■■■□□ 2.72
SDF2L1-201ENST00000248958 C4AP0C0L4 1744 aa32.01■■■□□ 2.72
SDF2L1-201ENST00000248958 KCNQ3O43525 872 aa32.01■■■□□ 2.71
SDF2L1-201ENST00000248958 MSL1Q68DK7 614 aa32■■■□□ 2.71
SDF2L1-201ENST00000248958 CCDC184Q52MB2 194 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms