RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
LRFN1-201ENST00000248668 ZC3H6P61129 1189 aaKnown RBP19.55■□□□□ 0.72
LRFN1-201ENST00000248668 CHD2O14647 1828 aaKnown RBP19.55■□□□□ 0.72
LRFN1-201ENST00000248668 CDC45O75419 566 aa19.55■□□□□ 0.72
LRFN1-201ENST00000248668 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
LRFN1-201ENST00000248668 GNAI2P04899 355 aa19.53■□□□□ 0.72
LRFN1-201ENST00000248668 KCNH5Q8NCM2 988 aa19.53■□□□□ 0.72
LRFN1-201ENST00000248668 PNMA6EA0A0J9YXQ4 647 aa19.53■□□□□ 0.72
LRFN1-201ENST00000248668 CD2BP2O95400 341 aaKnown RBP19.53■□□□□ 0.72
LRFN1-201ENST00000248668 RBM25P49756 843 aaKnown RBP19.53■□□□□ 0.72
LRFN1-201ENST00000248668 TEFQ10587 303 aa19.52■□□□□ 0.72
LRFN1-201ENST00000248668 AXIN2Q9Y2T1 843 aa19.52■□□□□ 0.72
LRFN1-201ENST00000248668 HMMRO75330 724 aa19.52■□□□□ 0.72
LRFN1-201ENST00000248668 LRRFIP2Q9Y608 721 aaKnown RBP19.52■□□□□ 0.72
LRFN1-201ENST00000248668 KRT28Q7Z3Y7 464 aa19.52■□□□□ 0.71
LRFN1-201ENST00000248668 SDSP20132 328 aa19.51■□□□□ 0.71
LRFN1-201ENST00000248668 ANKRD24Q8TF21 1146 aa19.51■□□□□ 0.71
LRFN1-201ENST00000248668 HSP90AB1P08238 724 aaKnown RBP19.51■□□□□ 0.71
LRFN1-201ENST00000248668 KIF2CQ99661 725 aa19.51■□□□□ 0.71
LRFN1-201ENST00000248668 LTN1O94822 1766 aa19.51■□□□□ 0.71
LRFN1-201ENST00000248668 ARXQ96QS3 562 aa19.5■□□□□ 0.71
LRFN1-201ENST00000248668 CHPF2Q9P2E5 772 aa19.5■□□□□ 0.71
LRFN1-201ENST00000248668 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
LRFN1-201ENST00000248668 HSP90AA1P07900 732 aaKnown RBP19.49■□□□□ 0.71
LRFN1-201ENST00000248668 ARHGEF25Q86VW2 580 aa19.49■□□□□ 0.71
LRFN1-201ENST00000248668 NFAT5O94916 1531 aa19.48■□□□□ 0.71
LRFN1-201ENST00000248668 EIF4A1P60842 406 aaKnown RBP19.48■□□□□ 0.71
LRFN1-201ENST00000248668 C1orf141Q5JVX7 400 aa19.47■□□□□ 0.71
LRFN1-201ENST00000248668 PLEKHO1Q53GL0 409 aaPredicted RBP19.47■□□□□ 0.71
LRFN1-201ENST00000248668 CABLES1Q8TDN4 633 aa19.47■□□□□ 0.71
LRFN1-201ENST00000248668 PRAMEF22A3QJZ6 481 aa19.47■□□□□ 0.71
LRFN1-201ENST00000248668 USP44Q9H0E7 712 aa19.46■□□□□ 0.71
LRFN1-201ENST00000248668 GNAI3P08754 354 aa19.46■□□□□ 0.71
LRFN1-201ENST00000248668 UBTFL1P0CB47 393 aaPredicted RBP19.46■□□□□ 0.71
LRFN1-201ENST00000248668 RGPD2P0DJD1 1756 aa19.46■□□□□ 0.71
LRFN1-201ENST00000248668 IL1RAPL2Q9NP60 686 aa19.46■□□□□ 0.71
LRFN1-201ENST00000248668 CHMP5Q9NZZ3 219 aa19.45■□□□□ 0.7
LRFN1-201ENST00000248668 PI4KAP2A4QPH2 592 aa19.45■□□□□ 0.7
LRFN1-201ENST00000248668 GLIPR1L2Q4G1C9 344 aa19.45■□□□□ 0.7
LRFN1-201ENST00000248668 PI4KAP1Q8N8J0 262 aa19.45■□□□□ 0.7
LRFN1-201ENST00000248668 GZF1Q9H116 711 aaPredicted RBP19.45■□□□□ 0.7
LRFN1-201ENST00000248668 PDE1AP54750 535 aa19.44■□□□□ 0.7
LRFN1-201ENST00000248668 AKAP4Q5JQC9 854 aa19.44■□□□□ 0.7
LRFN1-201ENST00000248668 ZMYND15Q9H091 742 aa19.44■□□□□ 0.7
LRFN1-201ENST00000248668 CEMIPQ8WUJ3 1361 aa19.44■□□□□ 0.7
LRFN1-201ENST00000248668 NLRP2Q9NX02 1062 aa19.44■□□□□ 0.7
LRFN1-201ENST00000248668 PXDNQ92626 1479 aa19.43■□□□□ 0.7
LRFN1-201ENST00000248668 LRRCC1Q9C099 1032 aa19.43■□□□□ 0.7
LRFN1-201ENST00000248668 ADAMTSL3P82987 1691 aa19.43■□□□□ 0.7
LRFN1-201ENST00000248668 RNMTO43148 476 aaKnown RBP19.43■□□□□ 0.7
LRFN1-201ENST00000248668 NBPF7P0C2Y1 421 aaPredicted RBP19.43■□□□□ 0.7
LRFN1-201ENST00000248668 HSPA2P54652 639 aa19.43■□□□□ 0.7
LRFN1-201ENST00000248668 ATP8B2P98198 1209 aa19.42■□□□□ 0.7
LRFN1-201ENST00000248668 PROSER3Q2NL68 480 aa19.42■□□□□ 0.7
LRFN1-201ENST00000248668 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
LRFN1-201ENST00000248668 C19orf44Q9H6X5 657 aa19.42■□□□□ 0.7
LRFN1-201ENST00000248668 LRRC37A3O60309 1634 aa19.42■□□□□ 0.7
LRFN1-201ENST00000248668 ATF3P18847 181 aa19.42■□□□□ 0.7
LRFN1-201ENST00000248668 CHRNA2Q15822 529 aa19.42■□□□□ 0.7
LRFN1-201ENST00000248668 RILPL2Q969X0 211 aa19.42■□□□□ 0.7
LRFN1-201ENST00000248668 ZNF142P52746 1687 aaPredicted RBP19.42■□□□□ 0.7
LRFN1-201ENST00000248668 TRIM6-TRIM34B2RNG4 842 aa19.41■□□□□ 0.7
LRFN1-201ENST00000248668 SLC39A6Q13433 755 aa19.41■□□□□ 0.7
LRFN1-201ENST00000248668 PPP1R42Q7Z4L9 355 aa19.4■□□□□ 0.7
LRFN1-201ENST00000248668 SNX21Q969T3 373 aa19.4■□□□□ 0.7
LRFN1-201ENST00000248668 A0A0U1RQG5 324 aaPredicted RBP19.4■□□□□ 0.7
LRFN1-201ENST00000248668 MCM4P33991 863 aa19.4■□□□□ 0.7
LRFN1-201ENST00000248668 CASC1Q6TDU7 716 aa19.4■□□□□ 0.7
LRFN1-201ENST00000248668 NUTM1Q86Y26 1132 aa19.4■□□□□ 0.7
LRFN1-201ENST00000248668 USP26Q9BXU7 913 aa19.4■□□□□ 0.7
LRFN1-201ENST00000248668 SURF6O75683 361 aaKnown RBP19.4■□□□□ 0.7
LRFN1-201ENST00000248668 MAP4K4O95819 1239 aaPredicted RBP19.4■□□□□ 0.7
LRFN1-201ENST00000248668 CSB-PGBD3P0DP91 1061 aa19.4■□□□□ 0.7
LRFN1-201ENST00000248668 AIMP1Q12904 312 aaKnown RBP19.4■□□□□ 0.7
LRFN1-201ENST00000248668 BABAM1Q9NWV8 329 aa19.4■□□□□ 0.7
LRFN1-201ENST00000248668 FAM208AQ9UK61 1670 aaKnown RBP19.39■□□□□ 0.69
LRFN1-201ENST00000248668 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.69
LRFN1-201ENST00000248668 C1orf167Q5SNV9 1468 aa19.39■□□□□ 0.69
LRFN1-201ENST00000248668 K7ELQ4 463 aaPredicted RBP19.38■□□□□ 0.69
LRFN1-201ENST00000248668 AMOTQ4VCS5 1084 aa19.38■□□□□ 0.69
LRFN1-201ENST00000248668 SRGAP3O43295 1099 aa19.38■□□□□ 0.69
LRFN1-201ENST00000248668 MX1P20591 662 aa19.38■□□□□ 0.69
LRFN1-201ENST00000248668 TMEM94Q12767 1356 aa19.38■□□□□ 0.69
LRFN1-201ENST00000248668 UNC5CLQ8IV45 518 aa19.36■□□□□ 0.69
LRFN1-201ENST00000248668 USP54Q70EL1 1684 aa19.36■□□□□ 0.69
LRFN1-201ENST00000248668 ERBB3P21860 1342 aa19.36■□□□□ 0.69
LRFN1-201ENST00000248668 RAPGEF4Q8WZA2 1011 aa19.36■□□□□ 0.69
LRFN1-201ENST00000248668 CWF19L2Q2TBE0 894 aaKnown RBP19.35■□□□□ 0.69
LRFN1-201ENST00000248668 MAP3K2Q9Y2U5 619 aa19.35■□□□□ 0.69
LRFN1-201ENST00000248668 PIP4K2AP48426 406 aaPredicted RBP19.35■□□□□ 0.69
LRFN1-201ENST00000248668 BEND3Q5T5X7 828 aa19.35■□□□□ 0.69
LRFN1-201ENST00000248668 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
LRFN1-201ENST00000248668 GIGYF1O75420 1035 aaPredicted RBP19.34■□□□□ 0.69
LRFN1-201ENST00000248668 TNPO1Q92973 898 aaKnown RBP19.34■□□□□ 0.69
LRFN1-201ENST00000248668 ERC2O15083 957 aa19.33■□□□□ 0.69
LRFN1-201ENST00000248668 SOS1Q07889 1333 aaPredicted RBP19.33■□□□□ 0.69
LRFN1-201ENST00000248668 DBF4Q9UBU7 674 aaPredicted RBP19.33■□□□□ 0.69
LRFN1-201ENST00000248668 MYL6BP14649 208 aa19.33■□□□□ 0.68
LRFN1-201ENST00000248668 OS9Q13438 667 aaPredicted RBP19.33■□□□□ 0.68
LRFN1-201ENST00000248668 ADCY9O60503 1353 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms