RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 NASPP49321 788 aaPredicted RBP18.86■□□□□ 0.61
SIN3B-201ENST00000248054 TTC39AQ5SRH9 613 aa18.86■□□□□ 0.61
SIN3B-201ENST00000248054 ZSCAN25Q6NSZ9 544 aa18.86■□□□□ 0.61
SIN3B-201ENST00000248054 MRPL50Q8N5N7 158 aaKnown RBP18.86■□□□□ 0.61
SIN3B-201ENST00000248054 PLEKHG1Q9ULL1 1385 aa18.86■□□□□ 0.61
SIN3B-201ENST00000248054 GNL3LQ9NVN8 582 aaKnown RBP18.86■□□□□ 0.61
SIN3B-201ENST00000248054 MCM4P33991 863 aa18.86■□□□□ 0.61
SIN3B-201ENST00000248054 LRRIQ1Q96JM4 1722 aa18.86■□□□□ 0.61
SIN3B-201ENST00000248054 PDIA4P13667 645 aaKnown RBP18.85■□□□□ 0.61
SIN3B-201ENST00000248054 HSP90AB3PQ58FF7 597 aa18.85■□□□□ 0.61
SIN3B-201ENST00000248054 CEP126Q9P2H0 1117 aa18.85■□□□□ 0.61
SIN3B-201ENST00000248054 TPM3P06753 285 aa18.85■□□□□ 0.61
SIN3B-201ENST00000248054 NLRP1Q9C000 1473 aa18.85■□□□□ 0.61
SIN3B-201ENST00000248054 FBLN1P23142 703 aa18.85■□□□□ 0.61
SIN3B-201ENST00000248054 MCTP1Q6DN14 999 aa18.85■□□□□ 0.61
SIN3B-201ENST00000248054 ZRANB1Q9UGI0 708 aa18.85■□□□□ 0.61
SIN3B-201ENST00000248054 BECN2A8MW95 431 aa18.84■□□□□ 0.61
SIN3B-201ENST00000248054 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
SIN3B-201ENST00000248054 CYP46A1Q9Y6A2 500 aa18.84■□□□□ 0.61
SIN3B-201ENST00000248054 UGGT1Q9NYU2 1555 aa18.84■□□□□ 0.61
SIN3B-201ENST00000248054 IP6K1Q92551 441 aa18.84■□□□□ 0.61
SIN3B-201ENST00000248054 IL13P35225 146 aa18.84■□□□□ 0.61
SIN3B-201ENST00000248054 EXOC6BQ9Y2D4 811 aa18.84■□□□□ 0.61
SIN3B-201ENST00000248054 NFXL1Q6ZNB6 911 aa18.83■□□□□ 0.61
SIN3B-201ENST00000248054 VPS37CA5D8V6 355 aaPredicted RBP18.83■□□□□ 0.61
SIN3B-201ENST00000248054 MAP3K5Q99683 1374 aa18.83■□□□□ 0.61
SIN3B-201ENST00000248054 MAP3K19Q56UN5 1328 aa18.83■□□□□ 0.6
SIN3B-201ENST00000248054 SPHKAPQ2M3C7 1700 aa18.83■□□□□ 0.6
SIN3B-201ENST00000248054 ATP7BP35670 1465 aa18.83■□□□□ 0.6
SIN3B-201ENST00000248054 SIL1Q9H173 461 aa18.83■□□□□ 0.6
SIN3B-201ENST00000248054 XRCC6P12956 609 aaKnown RBP eCLIP18.82■□□□□ 0.6
SIN3B-201ENST00000248054 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
SIN3B-201ENST00000248054 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
SIN3B-201ENST00000248054 NUTM2BA6NNL0 878 aaPredicted RBP18.82■□□□□ 0.6
SIN3B-201ENST00000248054 NUTM2EB1AL46 878 aaPredicted RBP18.82■□□□□ 0.6
SIN3B-201ENST00000248054 MBD3O95983 291 aa18.82■□□□□ 0.6
SIN3B-201ENST00000248054 NUTM2AQ8IVF1 878 aaPredicted RBP18.82■□□□□ 0.6
SIN3B-201ENST00000248054 HOXC9P31274 260 aa18.82■□□□□ 0.6
SIN3B-201ENST00000248054 KRT32Q14532 448 aa18.82■□□□□ 0.6
SIN3B-201ENST00000248054 F6X3S4 739 aa18.82■□□□□ 0.6
SIN3B-201ENST00000248054 DHX16O60231 1041 aaKnown RBP18.82■□□□□ 0.6
SIN3B-201ENST00000248054 SART3Q15020 963 aaKnown RBP18.82■□□□□ 0.6
SIN3B-201ENST00000248054 ZNF771Q7L3S4 317 aaPredicted RBP18.82■□□□□ 0.6
SIN3B-201ENST00000248054 TRPM1Q7Z4N2 1603 aa18.82■□□□□ 0.6
SIN3B-201ENST00000248054 SNRPA1P09661 255 aaKnown RBP18.81■□□□□ 0.6
SIN3B-201ENST00000248054 RASSF8Q8NHQ8 419 aa18.81■□□□□ 0.6
SIN3B-201ENST00000248054 MTHFSDQ2M296 383 aaKnown RBP18.81■□□□□ 0.6
SIN3B-201ENST00000248054 PANK2Q9BZ23 570 aa18.81■□□□□ 0.6
SIN3B-201ENST00000248054 AKAP2Q9Y2D5 859 aa18.81■□□□□ 0.6
SIN3B-201ENST00000248054 VAMP4O75379 141 aa18.81■□□□□ 0.6
SIN3B-201ENST00000248054 CCDC173Q0VFZ6 552 aa18.81■□□□□ 0.6
SIN3B-201ENST00000248054 IL1RAPL2Q9NP60 686 aa18.81■□□□□ 0.6
SIN3B-201ENST00000248054 PRDM10Q9NQV6 1147 aa18.81■□□□□ 0.6
SIN3B-201ENST00000248054 LRRFIP2Q9Y608 721 aaKnown RBP18.81■□□□□ 0.6
SIN3B-201ENST00000248054 SAFBQ15424 915 aaKnown RBP eCLIP18.8■□□□□ 0.6
SIN3B-201ENST00000248054 ZSCAN31Q96LW9 406 aaPredicted RBP18.8■□□□□ 0.6
SIN3B-201ENST00000248054 LMTK2Q8IWU2 1503 aa18.8■□□□□ 0.6
SIN3B-201ENST00000248054 CLTCL1P53675 1640 aa18.8■□□□□ 0.6
SIN3B-201ENST00000248054 RNF123Q5XPI4 1314 aa18.8■□□□□ 0.6
SIN3B-201ENST00000248054 EYA1Q99502 592 aa18.8■□□□□ 0.6
SIN3B-201ENST00000248054 ZNF652Q9Y2D9 606 aa18.8■□□□□ 0.6
SIN3B-201ENST00000248054 MYD88Q99836 296 aa18.8■□□□□ 0.6
SIN3B-201ENST00000248054 IGHDP01880 384 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 NUCB1Q02818 461 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 MPHOSPH8Q99549 860 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 RNF17Q9BXT8 1623 aaKnown RBP18.79■□□□□ 0.6
SIN3B-201ENST00000248054 ALDH1L1O75891 902 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 GCP02774 474 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 TPM1P09493 284 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 C8orf58Q8NAV2 365 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 CTNNA3Q9UI47 895 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 FAM135BQ49AJ0 1406 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 UQCRHLA0A096LP55 91 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 TULP1O00294 542 aaPredicted RBP18.79■□□□□ 0.6
SIN3B-201ENST00000248054 UQCRHP07919 91 aa18.79■□□□□ 0.6
SIN3B-201ENST00000248054 HOOK1Q9UJC3 728 aaKnown RBP18.79■□□□□ 0.6
SIN3B-201ENST00000248054 EXOC5O00471 708 aa18.78■□□□□ 0.6
SIN3B-201ENST00000248054 GPS2Q13227 327 aa18.78■□□□□ 0.6
SIN3B-201ENST00000248054 PHACTR3Q96KR7 559 aa18.78■□□□□ 0.6
SIN3B-201ENST00000248054 LETM1O95202 739 aaPredicted RBP18.78■□□□□ 0.6
SIN3B-201ENST00000248054 TNNT3P45378 269 aaPredicted RBP18.78■□□□□ 0.6
SIN3B-201ENST00000248054 ANKRD44Q8N8A2 993 aa18.78■□□□□ 0.6
SIN3B-201ENST00000248054 ZHX1Q9UKY1 873 aaPredicted RBP18.78■□□□□ 0.6
SIN3B-201ENST00000248054 ARHGEF10O15013 1369 aa18.78■□□□□ 0.6
SIN3B-201ENST00000248054 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
SIN3B-201ENST00000248054 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
SIN3B-201ENST00000248054 NCKAP5LQ9HCH0 1330 aa18.77■□□□□ 0.6
SIN3B-201ENST00000248054 TRIM34Q9BYJ4 488 aa18.77■□□□□ 0.59
SIN3B-201ENST00000248054 MAP3K2Q9Y2U5 619 aa18.76■□□□□ 0.59
SIN3B-201ENST00000248054 PTCD1O75127 700 aaKnown RBP18.76■□□□□ 0.59
SIN3B-201ENST00000248054 SLC3A2P08195 630 aaKnown RBP18.76■□□□□ 0.59
SIN3B-201ENST00000248054 NACAP1Q9BZK3 213 aa18.76■□□□□ 0.59
SIN3B-201ENST00000248054 XBP1P17861 261 aa18.76■□□□□ 0.59
SIN3B-201ENST00000248054 WDR33Q9C0J8 1336 aaKnown RBP18.76■□□□□ 0.59
SIN3B-201ENST00000248054 TSR1Q2NL82 804 aaKnown RBP18.76■□□□□ 0.59
SIN3B-201ENST00000248054 FOXD4L6Q3SYB3 417 aaPredicted RBP18.76■□□□□ 0.59
SIN3B-201ENST00000248054 FOXD4L3Q6VB84 417 aaPredicted RBP18.76■□□□□ 0.59
SIN3B-201ENST00000248054 CCDC39Q9UFE4 941 aa18.76■□□□□ 0.59
SIN3B-201ENST00000248054 PDE4CQ08493 712 aa18.75■□□□□ 0.59
SIN3B-201ENST00000248054 NOC3LQ8WTT2 800 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms