RNA–Protein interactions for RNA: ENST00000245323.4

EFNB2-201, Transcript of ephrin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB2, Length 4,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2-201ENST00000245323 SAMD9LQ8IVG5 1584 aa13.69□□□□□ -0.22
EFNB2-201ENST00000245323 NBPF6Q5VWK0 638 aa13.69□□□□□ -0.22
EFNB2-201ENST00000245323 PPP1R42Q7Z4L9 355 aa13.69□□□□□ -0.22
EFNB2-201ENST00000245323 NBPF4Q96M43 638 aa13.69□□□□□ -0.22
EFNB2-201ENST00000245323 PHAXQ9H814 394 aaKnown RBP13.69□□□□□ -0.22
EFNB2-201ENST00000245323 KIF3AQ9Y496 699 aa13.69□□□□□ -0.22
EFNB2-201ENST00000245323 PTMSP20962 102 aa13.69□□□□□ -0.22
EFNB2-201ENST00000245323 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
EFNB2-201ENST00000245323 ERC1Q8IUD2 1116 aa13.69□□□□□ -0.22
EFNB2-201ENST00000245323 FLT4P35916 1363 aa13.69□□□□□ -0.22
EFNB2-201ENST00000245323 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
EFNB2-201ENST00000245323 NEO1Q92859 1461 aa13.68□□□□□ -0.22
EFNB2-201ENST00000245323 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
EFNB2-201ENST00000245323 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
EFNB2-201ENST00000245323 G2E3Q7L622 706 aa13.68□□□□□ -0.22
EFNB2-201ENST00000245323 IQSEC3Q9UPP2 1182 aaPredicted RBP13.68□□□□□ -0.22
EFNB2-201ENST00000245323 CEBPZQ03701 1054 aaKnown RBP13.68□□□□□ -0.22
EFNB2-201ENST00000245323 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
EFNB2-201ENST00000245323 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 IP6K1Q92551 441 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 ERICH2A1L162 156 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 RBM5P52756 815 aaKnown RBP eCLIP13.67□□□□□ -0.22
EFNB2-201ENST00000245323 MPNDQ8N594 471 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 BICD2Q8TD16 824 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 VAMP4O75379 141 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
EFNB2-201ENST00000245323 HYPKQ9NX55 129 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 LRP2BPQ9P2M1 347 aa13.67□□□□□ -0.22
EFNB2-201ENST00000245323 IL2RBP14784 551 aa13.66□□□□□ -0.22
EFNB2-201ENST00000245323 C16orf71Q8IYS4 520 aaPredicted RBP13.66□□□□□ -0.22
EFNB2-201ENST00000245323 PES1O00541 588 aaKnown RBP13.66□□□□□ -0.22
EFNB2-201ENST00000245323 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
EFNB2-201ENST00000245323 MX1P20591 662 aa13.66□□□□□ -0.22
EFNB2-201ENST00000245323 ATP6V1AP38606 617 aa13.66□□□□□ -0.22
EFNB2-201ENST00000245323 IFIT5Q13325 482 aaKnown RBP13.66□□□□□ -0.22
EFNB2-201ENST00000245323 TRAK2O60296 914 aa13.66□□□□□ -0.22
EFNB2-201ENST00000245323 IL13P35225 146 aa13.66□□□□□ -0.22
EFNB2-201ENST00000245323 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
EFNB2-201ENST00000245323 KIF1BPQ96EK5 621 aa13.66□□□□□ -0.22
EFNB2-201ENST00000245323 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
EFNB2-201ENST00000245323 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
EFNB2-201ENST00000245323 IGHMBP2P38935 993 aaKnown RBP13.65□□□□□ -0.22
EFNB2-201ENST00000245323 TRIM29Q14134 588 aa13.65□□□□□ -0.22
EFNB2-201ENST00000245323 PRPF40AO75400 957 aaKnown RBP13.65□□□□□ -0.22
EFNB2-201ENST00000245323 LDHAL6AQ6ZMR3 332 aa13.65□□□□□ -0.22
EFNB2-201ENST00000245323 ATP6V1DQ9Y5K8 247 aa13.65□□□□□ -0.22
EFNB2-201ENST00000245323 SLC4A8Q2Y0W8 1093 aa13.65□□□□□ -0.22
EFNB2-201ENST00000245323 AKAP4Q5JQC9 854 aa13.65□□□□□ -0.22
EFNB2-201ENST00000245323 CAVIN1Q6NZI2 390 aaKnown RBP13.65□□□□□ -0.22
EFNB2-201ENST00000245323 POLR3AO14802 1390 aaPredicted RBP13.64□□□□□ -0.23
EFNB2-201ENST00000245323 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
EFNB2-201ENST00000245323 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
EFNB2-201ENST00000245323 NUCB2P80303 420 aa13.64□□□□□ -0.23
EFNB2-201ENST00000245323 COL17A1Q9UMD9 1497 aaPredicted RBP13.63□□□□□ -0.23
EFNB2-201ENST00000245323 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
EFNB2-201ENST00000245323 ANKIB1Q9P2G1 1089 aa13.63□□□□□ -0.23
EFNB2-201ENST00000245323 BECN2A8MW95 431 aa13.63□□□□□ -0.23
EFNB2-201ENST00000245323 FIBPO43427 364 aa13.63□□□□□ -0.23
EFNB2-201ENST00000245323 FAM182BQ5T319 152 aa13.63□□□□□ -0.23
EFNB2-201ENST00000245323 PTPRTO14522 1441 aa13.63□□□□□ -0.23
EFNB2-201ENST00000245323 HELBQ8NG08 1087 aaPredicted RBP13.63□□□□□ -0.23
EFNB2-201ENST00000245323 JAKMIP1Q96N16 626 aaKnown RBP13.62□□□□□ -0.23
EFNB2-201ENST00000245323 SKOR2Q2VWA4 1001 aaPredicted RBP13.62□□□□□ -0.23
EFNB2-201ENST00000245323 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
EFNB2-201ENST00000245323 GNL3LQ9NVN8 582 aaKnown RBP13.62□□□□□ -0.23
EFNB2-201ENST00000245323 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
EFNB2-201ENST00000245323 ZCCHC11Q5TAX3 1644 aaKnown RBP13.62□□□□□ -0.23
EFNB2-201ENST00000245323 KCNQ3O43525 872 aa13.62□□□□□ -0.23
EFNB2-201ENST00000245323 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
EFNB2-201ENST00000245323 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
EFNB2-201ENST00000245323 ZSCAN29Q8IWY8 852 aaPredicted RBP13.62□□□□□ -0.23
EFNB2-201ENST00000245323 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
EFNB2-201ENST00000245323 MRPL50Q8N5N7 158 aaKnown RBP13.62□□□□□ -0.23
EFNB2-201ENST00000245323 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
EFNB2-201ENST00000245323 AK7Q96M32 723 aa13.62□□□□□ -0.23
EFNB2-201ENST00000245323 TMEM94Q12767 1356 aa13.61□□□□□ -0.23
EFNB2-201ENST00000245323 A1BGP04217 495 aa13.61□□□□□ -0.23
EFNB2-201ENST00000245323 NUP133Q8WUM0 1156 aa13.61□□□□□ -0.23
EFNB2-201ENST00000245323 ZNF652Q9Y2D9 606 aa13.61□□□□□ -0.23
EFNB2-201ENST00000245323 CWC25Q9NXE8 425 aaPredicted RBP13.61□□□□□ -0.23
EFNB2-201ENST00000245323 PLA2R1Q13018 1463 aa13.61□□□□□ -0.23
EFNB2-201ENST00000245323 ZNF335Q9H4Z2 1342 aaPredicted RBP13.61□□□□□ -0.23
EFNB2-201ENST00000245323 ROBO2Q9HCK4 1378 aa13.61□□□□□ -0.23
EFNB2-201ENST00000245323 TDO2P48775 406 aa13.6□□□□□ -0.23
EFNB2-201ENST00000245323 PDE4CQ08493 712 aa13.6□□□□□ -0.23
EFNB2-201ENST00000245323 MINDY4BA8MYZ0 360 aa13.6□□□□□ -0.23
EFNB2-201ENST00000245323 C6orf229H3BNL8 230 aa13.6□□□□□ -0.23
EFNB2-201ENST00000245323 CTDP1Q9Y5B0 961 aaPredicted RBP13.6□□□□□ -0.23
EFNB2-201ENST00000245323 RNMTO43148 476 aaKnown RBP13.6□□□□□ -0.23
EFNB2-201ENST00000245323 RFC4P35249 363 aa13.6□□□□□ -0.23
EFNB2-201ENST00000245323 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
EFNB2-201ENST00000245323 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
EFNB2-201ENST00000245323 DDX11Q96FC9 970 aa13.6□□□□□ -0.23
EFNB2-201ENST00000245323 PUS7Q96PZ0 661 aaKnown RBP13.6□□□□□ -0.23
EFNB2-201ENST00000245323 PRR36Q9H6K5 1346 aa13.6□□□□□ -0.23
EFNB2-201ENST00000245323 GOLGA6L19H0YKK7 550 aa13.6□□□□□ -0.23
EFNB2-201ENST00000245323 GOLIM4O00461 696 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms