RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 NAPBQ9H115 298 aa8.6□□□□□ -1.03
SSR1-201ENST00000244763 TMPOP42166 694 aaKnown RBP8.6□□□□□ -1.03
SSR1-201ENST00000244763 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
SSR1-201ENST00000244763 PYM1Q9BRP8 204 aaKnown RBP8.6□□□□□ -1.03
SSR1-201ENST00000244763 PDRG1Q9NUG6 133 aa8.6□□□□□ -1.03
SSR1-201ENST00000244763 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
SSR1-201ENST00000244763 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
SSR1-201ENST00000244763 SYNJ1O43426 1573 aa8.6□□□□□ -1.03
SSR1-201ENST00000244763 CTCFLQ8NI51 663 aaPredicted RBP8.59□□□□□ -1.03
SSR1-201ENST00000244763 TTF1Q15361 905 aaPredicted RBP8.59□□□□□ -1.03
SSR1-201ENST00000244763 TTLL5Q6EMB2 1281 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 CCDC12Q8WUD4 166 aaPredicted RBP8.59□□□□□ -1.03
SSR1-201ENST00000244763 NBPF1Q3BBV0 1214 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 TMEM87AQ8NBN3 555 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 TSG101Q99816 390 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 FIBPO43427 364 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 TMEM266Q2M3C6 531 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 TTC21BQ7Z4L5 1316 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 PRPF40AO75400 957 aaKnown RBP8.59□□□□□ -1.03
SSR1-201ENST00000244763 BAG3O95817 575 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 SPTY2D1Q68D10 685 aaPredicted RBP8.59□□□□□ -1.03
SSR1-201ENST00000244763 PPP1R42Q7Z4L9 355 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 EIF3JO75822 258 aaKnown RBP8.59□□□□□ -1.03
SSR1-201ENST00000244763 AKNAQ7Z591 1439 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 H0YHG0 523 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 MYO1BO43795 1136 aa8.59□□□□□ -1.03
SSR1-201ENST00000244763 PTPRCP08575 1304 aa8.59□□□□□ -1.04
SSR1-201ENST00000244763 MAGI1Q96QZ7 1491 aaPredicted RBP8.58□□□□□ -1.04
SSR1-201ENST00000244763 ANKRD18BA2A2Z9 1011 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 ERLIN1O75477 346 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 BAG4O95429 457 aaKnown RBP8.58□□□□□ -1.04
SSR1-201ENST00000244763 SSBP05455 408 aaKnown RBP eCLIP8.58□□□□□ -1.04
SSR1-201ENST00000244763 RRS1Q15050 365 aaKnown RBP8.58□□□□□ -1.04
SSR1-201ENST00000244763 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 DBF4Q9UBU7 674 aaPredicted RBP8.58□□□□□ -1.04
SSR1-201ENST00000244763 NSD3Q9BZ95 1437 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 ZNF213O14771 459 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 VPS36Q86VN1 386 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 STXBP4Q6ZWJ1 553 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 PHF8Q9UPP1 1060 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 DUSP27Q5VZP5 1158 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 BICDL1Q6ZP65 573 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 KDM4AO75164 1064 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 CEBPZQ03701 1054 aaKnown RBP8.58□□□□□ -1.04
SSR1-201ENST00000244763 C1orf115Q9H7X2 142 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 TTC21AQ8NDW8 1320 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 FAM135AQ9P2D6 1515 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 TOM1O60784 492 aa8.58□□□□□ -1.04
SSR1-201ENST00000244763 JAKMIP1Q96N16 626 aaKnown RBP8.58□□□□□ -1.04
SSR1-201ENST00000244763 CETN1Q12798 172 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 LEKR1Q6ZMV7 388 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 CWC27Q6UX04 472 aaKnown RBP8.57□□□□□ -1.04
SSR1-201ENST00000244763 DDX46Q7L014 1031 aaKnown RBP8.57□□□□□ -1.04
SSR1-201ENST00000244763 NSD2O96028 1365 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 ADGRL1O94910 1474 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 ZGPATQ8N5A5 531 aaKnown RBP8.57□□□□□ -1.04
SSR1-201ENST00000244763 TSR2Q969E8 191 aaKnown RBP8.57□□□□□ -1.04
SSR1-201ENST00000244763 STK3Q13188 491 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 PLEKHH1Q9ULM0 1364 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 PTCD1O75127 700 aaKnown RBP8.57□□□□□ -1.04
SSR1-201ENST00000244763 AMPD3Q01432 767 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 CABP5Q9NP86 173 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 PRXQ9BXM0 1461 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 ST5P78524 1137 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 CCDC178Q5BJE1 867 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 FKBP15Q5T1M5 1219 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 IFNL2Q8IZJ0 200 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 STK11IPQ8N1F8 1099 aa8.57□□□□□ -1.04
SSR1-201ENST00000244763 EIF5P55010 431 aaKnown RBP8.56□□□□□ -1.04
SSR1-201ENST00000244763 NFKBIBQ15653 356 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 TAF4BQ92750 862 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 TRMT112Q9UI30 125 aaKnown RBP8.56□□□□□ -1.04
SSR1-201ENST00000244763 AMOTL2Q9Y2J4 779 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 HLA-DOAP06340 250 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 TTLL12Q14166 644 aaPredicted RBP8.56□□□□□ -1.04
SSR1-201ENST00000244763 KRT28Q7Z3Y7 464 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 LRRC27Q9C0I9 530 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 ARAP1Q96P48 1450 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 MPRIPQ6WCQ1 1025 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 CCDC66A2RUB6 948 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 KIF5BP33176 963 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 CATIPQ7Z7H3 387 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 NUP62CLQ9H1M0 184 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 EPB41L2O43491 1005 aaKnown RBP8.56□□□□□ -1.04
SSR1-201ENST00000244763 SH2B1Q9NRF2 756 aaPredicted RBP8.56□□□□□ -1.04
SSR1-201ENST00000244763 NESP48681 1621 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 CTAGE5O15320 804 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 RFC4P35249 363 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 SCLT1Q96NL6 688 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 MSH6P52701 1360 aa8.56□□□□□ -1.04
SSR1-201ENST00000244763 AXDND1Q5T1B0 1012 aaPredicted RBP8.56□□□□□ -1.04
SSR1-201ENST00000244763 DENND4BO75064 1496 aaPredicted RBP8.55□□□□□ -1.04
SSR1-201ENST00000244763 GSTO1P78417 241 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 RNF214Q8ND24 703 aa8.55□□□□□ -1.04
SSR1-201ENST00000244763 UPF3BQ9BZI7 483 aaKnown RBP8.55□□□□□ -1.04
SSR1-201ENST00000244763 WASLO00401 505 aaPredicted RBP8.55□□□□□ -1.04
SSR1-201ENST00000244763 MCM3P25205 808 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms