RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 RTF1Q92541 710 aaKnown RBP22.61■■□□□ 1.21
CHPF-201ENST00000243776 PDCL3Q9H2J4 239 aa22.61■■□□□ 1.21
CHPF-201ENST00000243776 ZKSCAN5Q9Y2L8 839 aa22.61■■□□□ 1.21
CHPF-201ENST00000243776 GNAI2P04899 355 aa22.61■■□□□ 1.21
CHPF-201ENST00000243776 MX1P20591 662 aa22.61■■□□□ 1.21
CHPF-201ENST00000243776 PTPRCP08575 1304 aa22.61■■□□□ 1.21
CHPF-201ENST00000243776 LRRCC1Q9C099 1032 aa22.6■■□□□ 1.21
CHPF-201ENST00000243776 PREX1Q8TCU6 1659 aa22.6■■□□□ 1.21
CHPF-201ENST00000243776 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
CHPF-201ENST00000243776 BRD1O95696 1058 aa22.59■■□□□ 1.21
CHPF-201ENST00000243776 CHMLP26374 656 aa22.59■■□□□ 1.21
CHPF-201ENST00000243776 PLCB2Q00722 1185 aa22.58■■□□□ 1.21
CHPF-201ENST00000243776 C17orf53Q8N3J3 647 aaPredicted RBP22.58■■□□□ 1.21
CHPF-201ENST00000243776 LRRFIP2Q9Y608 721 aaKnown RBP22.58■■□□□ 1.21
CHPF-201ENST00000243776 AATKQ6ZMQ8 1374 aa22.58■■□□□ 1.2
CHPF-201ENST00000243776 TSC1Q92574 1164 aa22.57■■□□□ 1.2
CHPF-201ENST00000243776 TSPY26PQ9H489 355 aa22.57■■□□□ 1.2
CHPF-201ENST00000243776 USP48Q86UV5 1035 aa22.57■■□□□ 1.2
CHPF-201ENST00000243776 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
CHPF-201ENST00000243776 DNTTIP2Q5QJE6 756 aaKnown RBP22.57■■□□□ 1.2
CHPF-201ENST00000243776 ZNF500O60304 480 aaPredicted RBP22.56■■□□□ 1.2
CHPF-201ENST00000243776 MCCP23508 829 aa22.56■■□□□ 1.2
CHPF-201ENST00000243776 HAP1P54257 671 aaPredicted RBP22.56■■□□□ 1.2
CHPF-201ENST00000243776 STK31Q9BXU1 1019 aa22.56■■□□□ 1.2
CHPF-201ENST00000243776 ACEP12821 1306 aa22.56■■□□□ 1.2
CHPF-201ENST00000243776 TTC21BQ7Z4L5 1316 aa22.55■■□□□ 1.2
CHPF-201ENST00000243776 CPA1P15085 419 aa22.55■■□□□ 1.2
CHPF-201ENST00000243776 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
CHPF-201ENST00000243776 NUTM2GQ5VZR2 741 aa22.55■■□□□ 1.2
CHPF-201ENST00000243776 CCDC39Q9UFE4 941 aa22.55■■□□□ 1.2
CHPF-201ENST00000243776 MBD3O95983 291 aa22.55■■□□□ 1.2
CHPF-201ENST00000243776 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
CHPF-201ENST00000243776 DDX54Q8TDD1 881 aaKnown RBP22.54■■□□□ 1.2
CHPF-201ENST00000243776 OSBPL3Q9H4L5 887 aa22.54■■□□□ 1.2
CHPF-201ENST00000243776 FLIIQ13045 1269 aa22.54■■□□□ 1.2
CHPF-201ENST00000243776 HS1BP3Q53T59 392 aa22.54■■□□□ 1.2
CHPF-201ENST00000243776 USP25Q9UHP3 1055 aa22.54■■□□□ 1.2
CHPF-201ENST00000243776 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.54■■□□□ 1.2
CHPF-201ENST00000243776 FAM177BA6PVY3 158 aa22.53■■□□□ 1.2
CHPF-201ENST00000243776 PLPPR3Q6T4P5 718 aa22.53■■□□□ 1.2
CHPF-201ENST00000243776 LTV1Q96GA3 475 aaPredicted RBP22.53■■□□□ 1.2
CHPF-201ENST00000243776 CNPY2Q9Y2B0 182 aa22.53■■□□□ 1.2
CHPF-201ENST00000243776 REREQ9P2R6 1566 aa22.52■■□□□ 1.2
CHPF-201ENST00000243776 KIAA0232Q92628 1395 aa22.52■■□□□ 1.19
CHPF-201ENST00000243776 CUL4AQ13619 759 aa22.51■■□□□ 1.19
CHPF-201ENST00000243776 A2ML1A8K2U0 1454 aa22.51■■□□□ 1.19
CHPF-201ENST00000243776 NEO1Q92859 1461 aa22.51■■□□□ 1.19
CHPF-201ENST00000243776 TTC12Q9H892 705 aaPredicted RBP22.5■■□□□ 1.19
CHPF-201ENST00000243776 CRB1P82279 1406 aa22.5■■□□□ 1.19
CHPF-201ENST00000243776 SRCIN1Q9C0H9 1055 aa22.49■■□□□ 1.19
CHPF-201ENST00000243776 ATP8B2P98198 1209 aa22.49■■□□□ 1.19
CHPF-201ENST00000243776 SPG7Q9UQ90 795 aa22.49■■□□□ 1.19
CHPF-201ENST00000243776 FIBPO43427 364 aa22.49■■□□□ 1.19
CHPF-201ENST00000243776 SURF6O75683 361 aaKnown RBP22.49■■□□□ 1.19
CHPF-201ENST00000243776 HCLS1P14317 486 aaPredicted RBP22.49■■□□□ 1.19
CHPF-201ENST00000243776 SALL3Q9BXA9 1300 aa22.49■■□□□ 1.19
CHPF-201ENST00000243776 AMPHP49418 695 aa22.48■■□□□ 1.19
CHPF-201ENST00000243776 PHAXQ9H814 394 aaKnown RBP22.48■■□□□ 1.19
CHPF-201ENST00000243776 EIF2S2P20042 333 aaKnown RBP22.47■■□□□ 1.19
CHPF-201ENST00000243776 MCM2P49736 904 aa22.47■■□□□ 1.19
CHPF-201ENST00000243776 TCHHQ07283 1943 aa22.47■■□□□ 1.19
CHPF-201ENST00000243776 EYA1Q99502 592 aa22.47■■□□□ 1.19
CHPF-201ENST00000243776 CHMP3Q9Y3E7 222 aa22.47■■□□□ 1.19
CHPF-201ENST00000243776 PLEKHG5O94827 1062 aa22.47■■□□□ 1.19
CHPF-201ENST00000243776 CWC27Q6UX04 472 aaKnown RBP22.46■■□□□ 1.19
CHPF-201ENST00000243776 RASEFQ8IZ41 740 aa22.46■■□□□ 1.19
CHPF-201ENST00000243776 GNAI3P08754 354 aa22.46■■□□□ 1.19
CHPF-201ENST00000243776 FAM69CQ0P6D2 419 aa22.46■■□□□ 1.19
CHPF-201ENST00000243776 SYAP1Q96A49 352 aaPredicted RBP22.46■■□□□ 1.19
CHPF-201ENST00000243776 PRDM10Q9NQV6 1147 aa22.46■■□□□ 1.19
CHPF-201ENST00000243776 UBTFL1P0CB47 393 aaPredicted RBP22.45■■□□□ 1.18
CHPF-201ENST00000243776 USP44Q9H0E7 712 aa22.45■■□□□ 1.18
CHPF-201ENST00000243776 KIAA2012Q0VF49 1180 aa22.44■■□□□ 1.18
CHPF-201ENST00000243776 CSPP1Q1MSJ5 1256 aa22.44■■□□□ 1.18
CHPF-201ENST00000243776 SLC26A8Q96RN1 970 aa22.44■■□□□ 1.18
CHPF-201ENST00000243776 ANXA1P04083 346 aa22.44■■□□□ 1.18
CHPF-201ENST00000243776 USHBP1Q8N6Y0 703 aa22.44■■□□□ 1.18
CHPF-201ENST00000243776 RIMS1Q86UR5 1692 aaKnown RBP22.44■■□□□ 1.18
CHPF-201ENST00000243776 PPP1R42Q7Z4L9 355 aa22.44■■□□□ 1.18
CHPF-201ENST00000243776 ROBO2Q9HCK4 1378 aa22.43■■□□□ 1.18
CHPF-201ENST00000243776 WDR33Q9C0J8 1336 aaKnown RBP22.43■■□□□ 1.18
CHPF-201ENST00000243776 ADCY5O95622 1261 aa22.43■■□□□ 1.18
CHPF-201ENST00000243776 CCDC30Q5VVM6 783 aa22.43■■□□□ 1.18
CHPF-201ENST00000243776 GIMAP6Q6P9H5 292 aa22.43■■□□□ 1.18
CHPF-201ENST00000243776 INTS4Q96HW7 963 aaKnown RBP22.43■■□□□ 1.18
CHPF-201ENST00000243776 AK2P54819 239 aa22.43■■□□□ 1.18
CHPF-201ENST00000243776 SASS6Q6UVJ0 657 aa22.42■■□□□ 1.18
CHPF-201ENST00000243776 ESF1Q9H501 851 aaKnown RBP22.42■■□□□ 1.18
CHPF-201ENST00000243776 LARGE1O95461 756 aa22.42■■□□□ 1.18
CHPF-201ENST00000243776 RICTORQ6R327 1708 aa22.42■■□□□ 1.18
CHPF-201ENST00000243776 SNX14Q9Y5W7 946 aa22.41■■□□□ 1.18
CHPF-201ENST00000243776 ANAPC15P60006 121 aa22.41■■□□□ 1.18
CHPF-201ENST00000243776 SRGAP3O43295 1099 aa22.4■■□□□ 1.18
CHPF-201ENST00000243776 SYT1P21579 422 aa22.4■■□□□ 1.18
CHPF-201ENST00000243776 HSPA4P34932 840 aa22.4■■□□□ 1.18
CHPF-201ENST00000243776 RIMBP3CA6NJZ7 1639 aa22.4■■□□□ 1.18
CHPF-201ENST00000243776 RIMBP3BA6NNM3 1639 aa22.4■■□□□ 1.18
CHPF-201ENST00000243776 RIMBP3Q9UFD9 1639 aa22.4■■□□□ 1.18
CHPF-201ENST00000243776 DLC1Q96QB1 1528 aa22.4■■□□□ 1.18
CHPF-201ENST00000243776 TERF1P54274 439 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms