RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 CLCN1P35523 988 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
TARDBP-201ENST00000240185 TAOK3Q9H2K8 898 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 CTAGE5O15320 804 aa16.09■□□□□ 0.17
TARDBP-201ENST00000240185 AACSQ86V21 672 aa16.08■□□□□ 0.17
TARDBP-201ENST00000240185 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.17
TARDBP-201ENST00000240185 CCDC6Q16204 474 aa16.08■□□□□ 0.16
TARDBP-201ENST00000240185 MACROD2A1Z1Q3 448 aa16.08■□□□□ 0.16
TARDBP-201ENST00000240185 TDRD12Q587J7 1177 aaKnown RBP16.08■□□□□ 0.16
TARDBP-201ENST00000240185 LARP1Q6PKG0 1096 aaKnown RBP16.08■□□□□ 0.16
TARDBP-201ENST00000240185 SERPINA10Q9UK55 444 aa16.08■□□□□ 0.16
TARDBP-201ENST00000240185 LIG1P18858 919 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 GNL3LQ9NVN8 582 aaKnown RBP16.07■□□□□ 0.16
TARDBP-201ENST00000240185 GNG11P61952 73 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 SMG6Q86US8 1419 aaKnown RBP16.07■□□□□ 0.16
TARDBP-201ENST00000240185 CLGNO14967 610 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 MICALL1Q8N3F8 863 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 ALS2CR12Q96Q35 445 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 IL1RAPL2Q9NP60 686 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 ZSCAN25Q6NSZ9 544 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 NLRP2Q9NX02 1062 aa16.07■□□□□ 0.16
TARDBP-201ENST00000240185 DAAM2Q86T65 1068 aa16.06■□□□□ 0.16
TARDBP-201ENST00000240185 CCDC12Q8WUD4 166 aaPredicted RBP16.06■□□□□ 0.16
TARDBP-201ENST00000240185 ARFGAP3Q9NP61 516 aa16.06■□□□□ 0.16
TARDBP-201ENST00000240185 FSD2A1L4K1 749 aa16.06■□□□□ 0.16
TARDBP-201ENST00000240185 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.16
TARDBP-201ENST00000240185 CEP57Q86XR8 500 aa16.06■□□□□ 0.16
TARDBP-201ENST00000240185 TBC1D2Q9BYX2 928 aa16.06■□□□□ 0.16
TARDBP-201ENST00000240185 DDX19AQ9NUU7 478 aaKnown RBP16.06■□□□□ 0.16
TARDBP-201ENST00000240185 SRRTQ9BXP5 876 aaKnown RBP16.05■□□□□ 0.16
TARDBP-201ENST00000240185 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
TARDBP-201ENST00000240185 CCDC160A6NGH7 325 aa16.05■□□□□ 0.16
TARDBP-201ENST00000240185 SRGAP3O43295 1099 aa16.05■□□□□ 0.16
TARDBP-201ENST00000240185 HSF2BPO75031 334 aa16.05■□□□□ 0.16
TARDBP-201ENST00000240185 MATR3P43243 847 aaKnown RBP eCLIP16.05■□□□□ 0.16
TARDBP-201ENST00000240185 PIBF1Q8WXW3 757 aa16.05■□□□□ 0.16
TARDBP-201ENST00000240185 CABP2Q9NPB3 220 aa16.05■□□□□ 0.16
TARDBP-201ENST00000240185 MIA2Q96PC5 1412 aa16.05■□□□□ 0.16
TARDBP-201ENST00000240185 TMCO5BA8MYB1 307 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 ANKRD18BA2A2Z9 1011 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 MCM6Q14566 821 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 TDO2P48775 406 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 CFAP57Q96MR6 1250 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 HOMER2Q9NSB8 354 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 ZNF165P49910 485 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 TSG101Q99816 390 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.04■□□□□ 0.16
TARDBP-201ENST00000240185 JADE2Q9NQC1 790 aa16.04■□□□□ 0.16
TARDBP-201ENST00000240185 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
TARDBP-201ENST00000240185 WDR63Q8IWG1 891 aa16.03■□□□□ 0.16
TARDBP-201ENST00000240185 CAPN2P17655 700 aa16.03■□□□□ 0.16
TARDBP-201ENST00000240185 UVSSAQ2YD98 709 aa16.03■□□□□ 0.16
TARDBP-201ENST00000240185 TTC31Q49AM3 519 aaPredicted RBP16.03■□□□□ 0.16
TARDBP-201ENST00000240185 RPAP2Q8IXW5 612 aaPredicted RBP16.03■□□□□ 0.16
TARDBP-201ENST00000240185 PNISRQ8TF01 805 aaKnown RBP16.03■□□□□ 0.16
TARDBP-201ENST00000240185 GDPD2Q9HCC8 539 aa16.03■□□□□ 0.16
TARDBP-201ENST00000240185 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
TARDBP-201ENST00000240185 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
TARDBP-201ENST00000240185 CCDC171Q6TFL3 1326 aa16.02■□□□□ 0.16
TARDBP-201ENST00000240185 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.16
TARDBP-201ENST00000240185 NOLC1Q14978 699 aaKnown RBP eCLIP16.02■□□□□ 0.16
TARDBP-201ENST00000240185 STX1AQ16623 288 aa16.02■□□□□ 0.16
TARDBP-201ENST00000240185 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.16
TARDBP-201ENST00000240185 CEP83Q9Y592 693 aa16.02■□□□□ 0.16
TARDBP-201ENST00000240185 PRPF40BQ6NWY9 871 aaKnown RBP16.02■□□□□ 0.15
TARDBP-201ENST00000240185 CNNM3Q8NE01 707 aa16.02■□□□□ 0.15
TARDBP-201ENST00000240185 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.15
TARDBP-201ENST00000240185 PRPF4BQ13523 1007 aaKnown RBP16.02■□□□□ 0.15
TARDBP-201ENST00000240185 BIN1O00499 593 aa16.01■□□□□ 0.15
TARDBP-201ENST00000240185 CCDC150Q8NCX0 1101 aa16.01■□□□□ 0.15
TARDBP-201ENST00000240185 ZNF76P36508 570 aa16.01■□□□□ 0.15
TARDBP-201ENST00000240185 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
TARDBP-201ENST00000240185 FGFR1OPO95684 399 aaKnown RBP16.01■□□□□ 0.15
TARDBP-201ENST00000240185 SEPT6Q14141 434 aa16.01■□□□□ 0.15
TARDBP-201ENST00000240185 CCDC96Q2M329 555 aa16.01■□□□□ 0.15
TARDBP-201ENST00000240185 C8orf76Q96K31 380 aa16.01■□□□□ 0.15
TARDBP-201ENST00000240185 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
TARDBP-201ENST00000240185 NUTM2GQ5VZR2 741 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 DRC1Q96MC2 740 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 PLEKHH1Q9ULM0 1364 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 NLRP6P59044 892 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 KLHL40Q2TBA0 621 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 PUS7Q96PZ0 661 aaKnown RBP16■□□□□ 0.15
TARDBP-201ENST00000240185 CTNNA2P26232 953 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 GUCY1B3Q02153 619 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 STAC3Q96MF2 364 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 ZNF830Q96NB3 372 aaPredicted RBP16■□□□□ 0.15
TARDBP-201ENST00000240185 EBAG9O00559 213 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 NSRP1Q9H0G5 558 aaKnown RBP16■□□□□ 0.15
TARDBP-201ENST00000240185 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
TARDBP-201ENST00000240185 C10orf67Q8IYJ2 551 aa16■□□□□ 0.15
TARDBP-201ENST00000240185 NUTM1Q86Y26 1132 aa15.99■□□□□ 0.15
TARDBP-201ENST00000240185 IGSF3O75054 1194 aa15.99■□□□□ 0.15
TARDBP-201ENST00000240185 BAG4O95429 457 aaKnown RBP15.99■□□□□ 0.15
TARDBP-201ENST00000240185 DDX23Q9BUQ8 820 aaKnown RBP15.99■□□□□ 0.15
TARDBP-201ENST00000240185 CCDC94Q9BW85 323 aaPredicted RBP15.99■□□□□ 0.15
TARDBP-201ENST00000240185 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
TARDBP-201ENST00000240185 OTUD6BQ8N6M0 293 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms