RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 ADGBQ8N7X0 1667 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 GPS2Q13227 327 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 DNAJC2Q99543 621 aaKnown RBP13.07□□□□□ -0.32
CCDC170-201ENST00000239374 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 WDR7Q9Y4E6 1490 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 PLCH2O75038 1416 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 ME1P48163 572 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 CEP85Q6P2H3 762 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 CPLX2Q6PUV4 134 aaKnown RBP13.07□□□□□ -0.32
CCDC170-201ENST00000239374 ERC1Q8IUD2 1116 aa13.07□□□□□ -0.32
CCDC170-201ENST00000239374 TNNT1P13805 278 aa13.06□□□□□ -0.32
CCDC170-201ENST00000239374 TFIP11Q9UBB9 837 aaKnown RBP13.06□□□□□ -0.32
CCDC170-201ENST00000239374 CD2BP2O95400 341 aaKnown RBP13.06□□□□□ -0.32
CCDC170-201ENST00000239374 GJB2P29033 226 aa13.06□□□□□ -0.32
CCDC170-201ENST00000239374 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
CCDC170-201ENST00000239374 PPP1R9BQ96SB3 815 aa13.06□□□□□ -0.32
CCDC170-201ENST00000239374 FAM177BA6PVY3 158 aa13.06□□□□□ -0.32
CCDC170-201ENST00000239374 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
CCDC170-201ENST00000239374 FLIIQ13045 1269 aa13.06□□□□□ -0.32
CCDC170-201ENST00000239374 ZSCAN22P10073 491 aaPredicted RBP13.05□□□□□ -0.32
CCDC170-201ENST00000239374 ABCC2Q92887 1545 aa13.05□□□□□ -0.32
CCDC170-201ENST00000239374 RAB11FIP3O75154 756 aa13.05□□□□□ -0.32
CCDC170-201ENST00000239374 PKP1Q13835 747 aa13.05□□□□□ -0.32
CCDC170-201ENST00000239374 PDILTQ8N807 584 aa13.05□□□□□ -0.32
CCDC170-201ENST00000239374 SCAND2PQ9GZW5 306 aaPredicted RBP13.04□□□□□ -0.32
CCDC170-201ENST00000239374 SH2B1Q9NRF2 756 aaPredicted RBP13.04□□□□□ -0.32
CCDC170-201ENST00000239374 TMEM63CQ9P1W3 806 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 PES1O00541 588 aaKnown RBP13.04□□□□□ -0.32
CCDC170-201ENST00000239374 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 PTPRTO14522 1441 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 ERICH4A6NGS2 130 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 STK38Q15208 465 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 ANAPC15P60006 121 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 TRIM29Q14134 588 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 ZNF396Q96N95 335 aaPredicted RBP13.04□□□□□ -0.32
CCDC170-201ENST00000239374 CLIP2Q9UDT6 1046 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 CFAP45Q9UL16 551 aa13.04□□□□□ -0.32
CCDC170-201ENST00000239374 APPP05067 770 aa13.03□□□□□ -0.32
CCDC170-201ENST00000239374 CHAMP1Q96JM3 812 aa13.03□□□□□ -0.32
CCDC170-201ENST00000239374 CEP57L1Q8IYX8 460 aa13.03□□□□□ -0.32
CCDC170-201ENST00000239374 CCDC94Q9BW85 323 aaPredicted RBP13.03□□□□□ -0.32
CCDC170-201ENST00000239374 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
CCDC170-201ENST00000239374 FANCAO15360 1455 aa13.02□□□□□ -0.32
CCDC170-201ENST00000239374 KDM4AO75164 1064 aa13.02□□□□□ -0.32
CCDC170-201ENST00000239374 TRDNQ13061 729 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 TRMT1Q9NXH9 659 aaKnown RBP13.02□□□□□ -0.33
CCDC170-201ENST00000239374 TERF1P54274 439 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 LRRFIP1Q32MZ4 808 aaKnown RBP13.02□□□□□ -0.33
CCDC170-201ENST00000239374 RALYLQ86SE5 291 aaKnown RBP13.02□□□□□ -0.33
CCDC170-201ENST00000239374 RASSF8Q8NHQ8 419 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 PUS7Q96PZ0 661 aaKnown RBP13.02□□□□□ -0.33
CCDC170-201ENST00000239374 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.33
CCDC170-201ENST00000239374 ZNF165P49910 485 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 WASHC4Q2M389 1173 aa13.02□□□□□ -0.33
CCDC170-201ENST00000239374 FAM177A1Q8N128 213 aaPredicted RBP13.02□□□□□ -0.33
CCDC170-201ENST00000239374 TPM1P09493 284 aa13.01□□□□□ -0.33
CCDC170-201ENST00000239374 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
CCDC170-201ENST00000239374 TAF7Q15545 349 aaPredicted RBP13.01□□□□□ -0.33
CCDC170-201ENST00000239374 C17orf53Q8N3J3 647 aaPredicted RBP13.01□□□□□ -0.33
CCDC170-201ENST00000239374 NECAB1Q8N987 351 aa13.01□□□□□ -0.33
CCDC170-201ENST00000239374 WASLO00401 505 aaPredicted RBP13.01□□□□□ -0.33
CCDC170-201ENST00000239374 PDIA4P13667 645 aaKnown RBP13.01□□□□□ -0.33
CCDC170-201ENST00000239374 CCDC186Q7Z3E2 898 aa13.01□□□□□ -0.33
CCDC170-201ENST00000239374 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
CCDC170-201ENST00000239374 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
CCDC170-201ENST00000239374 OLFM4Q6UX06 510 aa13.01□□□□□ -0.33
CCDC170-201ENST00000239374 INTS4Q96HW7 963 aaKnown RBP13.01□□□□□ -0.33
CCDC170-201ENST00000239374 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
CCDC170-201ENST00000239374 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
CCDC170-201ENST00000239374 TULP1O00294 542 aaPredicted RBP13□□□□□ -0.33
CCDC170-201ENST00000239374 IGSF3O75054 1194 aa13□□□□□ -0.33
CCDC170-201ENST00000239374 F13A1P00488 732 aa13□□□□□ -0.33
CCDC170-201ENST00000239374 SERPINC1P01008 464 aa13□□□□□ -0.33
CCDC170-201ENST00000239374 CEP170Q5SW79 1584 aa13□□□□□ -0.33
CCDC170-201ENST00000239374 MAST1Q9Y2H9 1570 aa13□□□□□ -0.33
CCDC170-201ENST00000239374 KDM5DQ9BY66 1539 aa13□□□□□ -0.33
CCDC170-201ENST00000239374 PSME1Q06323 249 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 KIF18AQ8NI77 898 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 DDX19AQ9NUU7 478 aaKnown RBP12.99□□□□□ -0.33
CCDC170-201ENST00000239374 HOOK1Q9UJC3 728 aaKnown RBP12.99□□□□□ -0.33
CCDC170-201ENST00000239374 CHMLP26374 656 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
CCDC170-201ENST00000239374 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 CYB5RLQ6IPT4 315 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 TSC1Q92574 1164 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 ZNF500O60304 480 aaPredicted RBP12.99□□□□□ -0.33
CCDC170-201ENST00000239374 RHPN1Q8TCX5 695 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 ABCC10Q5T3U5 1492 aa12.99□□□□□ -0.33
CCDC170-201ENST00000239374 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
CCDC170-201ENST00000239374 TCEANC2Q96MN5 208 aa12.98□□□□□ -0.33
CCDC170-201ENST00000239374 PBRM1Q86U86 1689 aa12.98□□□□□ -0.33
CCDC170-201ENST00000239374 GADD45BO75293 160 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms